RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 SGK494L7N484 410 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 EIF3FO00303 357 aaPredicted RBP3□□□□□ -1.93
TCOF1-208ENST00000506063 HCRTR2O43614 444 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 BUD23O43709 281 aaKnown RBP3□□□□□ -1.93
TCOF1-208ENST00000506063 RAMP1O60894 148 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 B4GALT2O60909 372 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 LILRA1O75019 489 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 TRIM3O75382 744 aaPredicted RBP3□□□□□ -1.93
TCOF1-208ENST00000506063 SMNDC1O75940 238 aaKnown RBP eCLIP3□□□□□ -1.93
TCOF1-208ENST00000506063 FKBP9O95302 570 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 C1QAP02745 245 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 KRT1P04264 644 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 HPNP05981 417 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 MMEP08473 750 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 KRT3P12035 628 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 CPN1P15169 458 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 CHRNB2P17787 502 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 IL1RNP18510 177 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 TPSB2P20231 275 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 TBXA2RP21731 343 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 CA4P22748 312 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 AKT1P31749 480 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 CDK9P50750 372 aaKnown RBP3□□□□□ -1.93
TCOF1-208ENST00000506063 CLCN2P51788 898 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 HK2P52789 917 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 NAGLUP54802 743 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 STX17P56962 302 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 BTG2P78543 158 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 XIAPP98170 497 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 TYRO3Q06418 890 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 GAB1Q13480 694 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 ITGA9Q13797 1035 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 SF1Q15637 639 aaKnown RBP3□□□□□ -1.93
TCOF1-208ENST00000506063 ZNHIT3Q15649 155 aaPredicted RBP3□□□□□ -1.93
TCOF1-208ENST00000506063 TPSAB1Q15661 275 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 SLC14A2Q15849 920 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 ZNF791Q3KP31 576 aaPredicted RBP3□□□□□ -1.93
TCOF1-208ENST00000506063 ERMARDQ5T6L9 678 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 MFSD4BQ5TF39 518 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 TAF3Q5VWG9 929 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 ZNF425Q6IV72 752 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 SASS6Q6UVJ0 657 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 SBSNQ6UWP8 590 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 STAC2Q6ZMT1 411 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 VN1R4Q7Z5H5 301 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 RELL1Q8IUW5 271 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 CDKL3Q8IVW4 592 aaPredicted RBP3□□□□□ -1.93
TCOF1-208ENST00000506063 LINC01356Q8N9X3 169 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 ZNF610Q8N9Z0 462 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 MLKLQ8NB16 471 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 SYT14Q8NB59 555 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 MSANTD4Q8NCY6 345 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 B3GNT7Q8NFL0 401 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 OR5T3Q8NGG3 340 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 SLC30A5Q8TAD4 765 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 ASB15Q8WXK1 588 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 SLC22A18Q96BI1 424 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 PGM2Q96G03 612 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 FOXN4Q96NZ1 517 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 JMJD8Q96S16 334 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 CCT8L2Q96SF2 557 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 SLC30A3Q99726 388 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 MIPEPQ99797 713 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 CRACR2AQ9BSW2 395 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 NTMT1Q9BV86 223 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 ADGRE3Q9BY15 652 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 BPESC1Q9GZL8 116 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 ADAP2Q9NPF8 381 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 SACM1LQ9NTJ5 587 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 ANO10Q9NW15 660 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 ADAM22Q9P0K1 906 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3□□□□□ -1.93
TCOF1-208ENST00000506063 MYOTQ9UBF9 498 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 AMACRQ9UHK6 382 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 RWDD2AQ9UIY3 292 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 MAPRE3Q9UPY8 281 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 PPIAL4AQ9Y536 164 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 IKBKGQ9Y6K9 419 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3□□□□□ -1.93
TCOF1-208ENST00000506063 PLECQ15149 4684 aaKnown RBP3□□□□□ -1.93
TCOF1-208ENST00000506063 DOCK11Q5JSL3 2073 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 DPRXA6NFQ7 191 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 CCT8L1PA6NM43 557 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 M0QZ24 198 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 NDUFS8O00217 210 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 WWP2O00308 870 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 CLOCKO15516 846 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 MFSD11O43934 449 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 DLX3O60479 287 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 RDH16O75452 317 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 FSHBP01225 129 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 TPM3P06753 285 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 CRHP06850 196 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 TACSTD2P09758 323 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 ERVK-10P10266 1014 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 RBP3P10745 1247 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 CD8BP10966 210 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 ATP1B2P14415 290 aaPredicted RBP2.99□□□□□ -1.93
TCOF1-208ENST00000506063 TCF4P15884 667 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 PPP3CBP16298 524 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms