RNA–Protein interactions for RNA: ENST00000505884.5

CCND3-209, Transcript of cyclin D3, humanhuman

TSL 4

Gene CCND3, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-209ENST00000505884 CSF3RQ99062 836 aa17.04■□□□□ 0.32
CCND3-209ENST00000505884 CD244Q9BZW8 370 aa17.04■□□□□ 0.32
CCND3-209ENST00000505884 LIN28AQ9H9Z2 209 aaKnown RBP17.04■□□□□ 0.32
CCND3-209ENST00000505884 PRTFDC1Q9NRG1 225 aa17.04■□□□□ 0.32
CCND3-209ENST00000505884 IGSF5Q9NSI5 407 aa17.04■□□□□ 0.32
CCND3-209ENST00000505884 GPRC5BQ9NZH0 403 aa17.04■□□□□ 0.32
CCND3-209ENST00000505884 IGKV3D-11A0A0A0MRZ8 115 aa17.03■□□□□ 0.32
CCND3-209ENST00000505884 TRBV11-1A0A0K0K1C0 115 aa17.03■□□□□ 0.32
CCND3-209ENST00000505884 RTCAO00442 366 aaKnown RBP17.03■□□□□ 0.32
CCND3-209ENST00000505884 CLEC3AO75596 197 aa17.03■□□□□ 0.32
CCND3-209ENST00000505884 STX2P32856 288 aa17.03■□□□□ 0.32
CCND3-209ENST00000505884 MSH2P43246 934 aa17.03■□□□□ 0.32
CCND3-209ENST00000505884 IRF8Q02556 426 aa17.03■□□□□ 0.32
CCND3-209ENST00000505884 C8orf74Q6P047 294 aa17.03■□□□□ 0.32
CCND3-209ENST00000505884 TRIM40Q6P9F5 258 aa17.03■□□□□ 0.32
CCND3-209ENST00000505884 CYS1Q717R9 158 aa17.03■□□□□ 0.32
CCND3-209ENST00000505884 TBC1D1Q86TI0 1168 aaPredicted RBP17.03■□□□□ 0.32
CCND3-209ENST00000505884 ISCA2Q86U28 154 aa17.03■□□□□ 0.32
CCND3-209ENST00000505884 PDPRQ8NCN5 879 aa17.03■□□□□ 0.32
CCND3-209ENST00000505884 ARMC2Q8NEN0 867 aa17.03■□□□□ 0.32
CCND3-209ENST00000505884 NFAM1Q8NET5 270 aaPredicted RBP17.03■□□□□ 0.32
CCND3-209ENST00000505884 TTLQ8NG68 377 aa17.03■□□□□ 0.32
CCND3-209ENST00000505884 OR2L5Q8NG80 312 aa17.03■□□□□ 0.32
CCND3-209ENST00000505884 DNAJB8Q8NHS0 232 aa17.03■□□□□ 0.32
CCND3-209ENST00000505884 KCTD4Q8WVF5 259 aa17.03■□□□□ 0.32
CCND3-209ENST00000505884 ZNF592Q92610 1267 aa17.03■□□□□ 0.32
CCND3-209ENST00000505884 PTCD3Q96EY7 689 aaKnown RBP17.03■□□□□ 0.32
CCND3-209ENST00000505884 QRFPRQ96P65 431 aa17.03■□□□□ 0.32
CCND3-209ENST00000505884 CAPS2Q9BXY5 557 aa17.03■□□□□ 0.32
CCND3-209ENST00000505884 DEFB126Q9BYW3 111 aa17.03■□□□□ 0.32
CCND3-209ENST00000505884 COPS7BQ9H9Q2 264 aaPredicted RBP17.03■□□□□ 0.32
CCND3-209ENST00000505884 FBXW2Q9UKT8 454 aa17.03■□□□□ 0.32
CCND3-209ENST00000505884 A0A1B0GUH1 482 aa17.02■□□□□ 0.32
CCND3-209ENST00000505884 NPIPA5E9PKD4 350 aa17.02■□□□□ 0.32
CCND3-209ENST00000505884 NEURL1O76050 574 aa17.02■□□□□ 0.32
CCND3-209ENST00000505884 URI1O94763 535 aaPredicted RBP17.02■□□□□ 0.32
CCND3-209ENST00000505884 SP1P08047 785 aa17.02■□□□□ 0.32
CCND3-209ENST00000505884 LIM2P55344 173 aa17.02■□□□□ 0.32
CCND3-209ENST00000505884 PER3P56645 1201 aa17.02■□□□□ 0.32
CCND3-209ENST00000505884 RAB38P57729 211 aa17.02■□□□□ 0.32
CCND3-209ENST00000505884 ALDH6A1Q02252 535 aaKnown RBP17.02■□□□□ 0.32
CCND3-209ENST00000505884 GUCY2DQ02846 1103 aa17.02■□□□□ 0.32
CCND3-209ENST00000505884 ZRSR2Q15696 482 aaKnown RBP17.02■□□□□ 0.32
CCND3-209ENST00000505884 ABHD17CQ6PCB6 329 aa17.02■□□□□ 0.32
CCND3-209ENST00000505884 C16orf47Q6ZP98 133 aaPredicted RBP17.02■□□□□ 0.32
CCND3-209ENST00000505884 STAG3L4Q8TBR4 150 aa17.02■□□□□ 0.32
CCND3-209ENST00000505884 SORBS1Q9BX66 1292 aaKnown RBP17.02■□□□□ 0.32
CCND3-209ENST00000505884 NT5DC2Q9H857 520 aa17.02■□□□□ 0.32
CCND3-209ENST00000505884 NMRAL1Q9HBL8 299 aa17.02■□□□□ 0.32
CCND3-209ENST00000505884 NPIPA1Q9UND3 350 aa17.02■□□□□ 0.32
CCND3-209ENST00000505884 CELSR2Q9HCU4 2923 aa17.02■□□□□ 0.31
CCND3-209ENST00000505884 LRRC14BA6NHZ5 514 aa17.01■□□□□ 0.31
CCND3-209ENST00000505884 CCL21O00585 134 aa17.01■□□□□ 0.31
CCND3-209ENST00000505884 SLC25A12O75746 678 aa17.01■□□□□ 0.31
CCND3-209ENST00000505884 TGFB1P01137 390 aa17.01■□□□□ 0.31
CCND3-209ENST00000505884 IFNA16P05015 189 aa17.01■□□□□ 0.31
CCND3-209ENST00000505884 LTA4HP09960 611 aaKnown RBP17.01■□□□□ 0.31
CCND3-209ENST00000505884 RFC3P40938 356 aa17.01■□□□□ 0.31
CCND3-209ENST00000505884 MLF1P58340 268 aa17.01■□□□□ 0.31
CCND3-209ENST00000505884 HSF1Q00613 529 aa17.01■□□□□ 0.31
CCND3-209ENST00000505884 ID2Q02363 134 aa17.01■□□□□ 0.31
CCND3-209ENST00000505884 DDX39BQ13838 428 aaKnown RBP17.01■□□□□ 0.31
CCND3-209ENST00000505884 HIST2H2ACQ16777 129 aaPredicted RBP17.01■□□□□ 0.31
CCND3-209ENST00000505884 HIST2H2AA3Q6FI13 130 aa17.01■□□□□ 0.31
CCND3-209ENST00000505884 SLC25A25Q6KCM7 469 aa17.01■□□□□ 0.31
CCND3-209ENST00000505884 ZNF227Q86WZ6 799 aa17.01■□□□□ 0.31
CCND3-209ENST00000505884 MYLK4Q86YV6 388 aaPredicted RBP17.01■□□□□ 0.31
CCND3-209ENST00000505884 CPSF7Q8N684 471 aaKnown RBP17.01■□□□□ 0.31
CCND3-209ENST00000505884 NCLNQ969V3 563 aa17.01■□□□□ 0.31
CCND3-209ENST00000505884 SCMH1Q96GD3 660 aa17.01■□□□□ 0.31
CCND3-209ENST00000505884 SERINC2Q96SA4 455 aa17.01■□□□□ 0.31
CCND3-209ENST00000505884 ATOH8Q96SQ7 321 aa17.01■□□□□ 0.31
CCND3-209ENST00000505884 CLK4Q9HAZ1 481 aaKnown RBP17.01■□□□□ 0.31
CCND3-209ENST00000505884 NUDT4Q9NZJ9 180 aa17.01■□□□□ 0.31
CCND3-209ENST00000505884 ZNF223Q9UK11 482 aaPredicted RBP17.01■□□□□ 0.31
CCND3-209ENST00000505884 ACOT9Q9Y305 439 aa17.01■□□□□ 0.31
CCND3-209ENST00000505884 CLDN4O14493 209 aa17■□□□□ 0.31
CCND3-209ENST00000505884 PRKNO60260 465 aaPredicted RBP17■□□□□ 0.31
CCND3-209ENST00000505884 KERAO60938 352 aa17■□□□□ 0.31
CCND3-209ENST00000505884 CRABP2P29373 138 aa17■□□□□ 0.31
CCND3-209ENST00000505884 CYB561P49447 251 aa17■□□□□ 0.31
CCND3-209ENST00000505884 MTTPP55157 894 aa17■□□□□ 0.31
CCND3-209ENST00000505884 CKAP4Q07065 602 aaKnown RBP17■□□□□ 0.31
CCND3-209ENST00000505884 ILF2Q12905 390 aaKnown RBP17■□□□□ 0.31
CCND3-209ENST00000505884 ADPRMQ3LIE5 342 aa17■□□□□ 0.31
CCND3-209ENST00000505884 PAGE2BQ5JRK9 111 aa17■□□□□ 0.31
CCND3-209ENST00000505884 CDKL4Q5MAI5 379 aa17■□□□□ 0.31
CCND3-209ENST00000505884 ZNF793Q6ZN11 406 aa17■□□□□ 0.31
CCND3-209ENST00000505884 LRRC70Q7Z2Q7 622 aa17■□□□□ 0.31
CCND3-209ENST00000505884 ZNF572Q7Z3I7 529 aaPredicted RBP17■□□□□ 0.31
CCND3-209ENST00000505884 UBE3DQ7Z6J8 389 aa17■□□□□ 0.31
CCND3-209ENST00000505884 SCUBE1Q8IWY4 988 aa17■□□□□ 0.31
CCND3-209ENST00000505884 CENPLQ8N0S6 344 aaPredicted RBP17■□□□□ 0.31
CCND3-209ENST00000505884 TEX9Q8N6V9 391 aa17■□□□□ 0.31
CCND3-209ENST00000505884 TMEM178AQ8NBL3 297 aa17■□□□□ 0.31
CCND3-209ENST00000505884 APCDD1LQ8NCL9 501 aa17■□□□□ 0.31
CCND3-209ENST00000505884 B3GNT7Q8NFL0 401 aa17■□□□□ 0.31
CCND3-209ENST00000505884 MAPKAP1Q9BPZ7 522 aa17■□□□□ 0.31
CCND3-209ENST00000505884 EFCAB11Q9BUY7 163 aa17■□□□□ 0.31
CCND3-209ENST00000505884 NPLQ9BXD5 320 aaPredicted RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms