RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 PDHBP11177 359 aa3.51□□□□□ -1.85
TRAPPC13-208ENST00000505553 ODC1P11926 461 aa3.51□□□□□ -1.85
TRAPPC13-208ENST00000505553 DARSP14868 501 aaKnown RBP3.51□□□□□ -1.85
TRAPPC13-208ENST00000505553 MSH3P20585 1137 aa3.51□□□□□ -1.85
TRAPPC13-208ENST00000505553 HNRNPA2B1P22626 353 aaKnown RBP3.51□□□□□ -1.85
TRAPPC13-208ENST00000505553 CCL11P51671 97 aa3.51□□□□□ -1.85
TRAPPC13-208ENST00000505553 ZXDBP98169 803 aa3.51□□□□□ -1.85
TRAPPC13-208ENST00000505553 MSLNQ13421 630 aaPredicted RBP3.51□□□□□ -1.85
TRAPPC13-208ENST00000505553 FHL1Q13642 323 aa3.51□□□□□ -1.85
TRAPPC13-208ENST00000505553 KLF9Q13886 244 aaPredicted RBP3.51□□□□□ -1.85
TRAPPC13-208ENST00000505553 TMEM41BQ5BJD5 291 aa3.51□□□□□ -1.85
TRAPPC13-208ENST00000505553 C9orf50Q5SZB4 431 aa3.51□□□□□ -1.85
TRAPPC13-208ENST00000505553 STXBP5Q5T5C0 1151 aa3.51□□□□□ -1.85
TRAPPC13-208ENST00000505553 RUSC1-AS1Q66K80 236 aa3.51□□□□□ -1.85
TRAPPC13-208ENST00000505553 DHRS11Q6UWP2 260 aa3.51□□□□□ -1.85
TRAPPC13-208ENST00000505553 UNQ6126/PRO20091Q6UXV3 157 aa3.51□□□□□ -1.85
TRAPPC13-208ENST00000505553 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.51□□□□□ -1.85
TRAPPC13-208ENST00000505553 UNC5CLQ8IV45 518 aa3.51□□□□□ -1.85
TRAPPC13-208ENST00000505553 FBXL14Q8N1E6 418 aa3.51□□□□□ -1.85
TRAPPC13-208ENST00000505553 METTL27Q8N6F8 245 aaPredicted RBP3.51□□□□□ -1.85
TRAPPC13-208ENST00000505553 BANPQ8N9N5 519 aa3.51□□□□□ -1.85
TRAPPC13-208ENST00000505553 COLGALT1Q8NBJ5 622 aa3.51□□□□□ -1.85
TRAPPC13-208ENST00000505553 CLEC18CQ8NCF0 446 aa3.51□□□□□ -1.85
TRAPPC13-208ENST00000505553 OR6M1Q8NGM8 313 aa3.51□□□□□ -1.85
TRAPPC13-208ENST00000505553 CHPT1Q8WUD6 406 aa3.51□□□□□ -1.85
TRAPPC13-208ENST00000505553 ASB5Q8WWX0 329 aa3.51□□□□□ -1.85
TRAPPC13-208ENST00000505553 HIST1H2ACQ93077 130 aa3.51□□□□□ -1.85
TRAPPC13-208ENST00000505553 NCLNQ969V3 563 aa3.51□□□□□ -1.85
TRAPPC13-208ENST00000505553 PINX1Q96BK5 328 aaKnown RBP3.51□□□□□ -1.85
TRAPPC13-208ENST00000505553 RTP4Q96DX8 246 aa3.51□□□□□ -1.85
TRAPPC13-208ENST00000505553 HMCESQ96FZ2 354 aa3.51□□□□□ -1.85
TRAPPC13-208ENST00000505553 S1PR3Q99500 378 aa3.51□□□□□ -1.85
TRAPPC13-208ENST00000505553 CBWD1Q9BRT8 395 aa3.51□□□□□ -1.85
TRAPPC13-208ENST00000505553 CCM2Q9BSQ5 444 aa3.51□□□□□ -1.85
TRAPPC13-208ENST00000505553 NUSAP1Q9BXS6 441 aaKnown RBP3.51□□□□□ -1.85
TRAPPC13-208ENST00000505553 POLR1EQ9GZS1 481 aaKnown RBP3.51□□□□□ -1.85
TRAPPC13-208ENST00000505553 GAREM1Q9H706 876 aa3.51□□□□□ -1.85
TRAPPC13-208ENST00000505553 RNF186Q9NXI6 227 aa3.51□□□□□ -1.85
TRAPPC13-208ENST00000505553 FLRT3Q9NZU0 649 aa3.51□□□□□ -1.85
TRAPPC13-208ENST00000505553 FBXL4Q9UKA2 621 aa3.51□□□□□ -1.85
TRAPPC13-208ENST00000505553 ETV7Q9Y603 341 aa3.51□□□□□ -1.85
TRAPPC13-208ENST00000505553 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.51□□□□□ -1.85
TRAPPC13-208ENST00000505553 KDRP35968 1356 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 ATP6AP2A0A1C7CYW4 349 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 TMEM89A2RUT3 159 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 ANKRD30BLA7E2S9 258 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 CYSRT1A8MQ03 144 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 A8MVM7 634 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 ZNF732B4DXR9 585 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 LGALS8O00214 317 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 ARPC1BO15143 372 aaKnown RBP3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 TLX2O43763 284 aaPredicted RBP3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 GLRA3O75311 464 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 SPAG6O75602 509 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 DFFBO76075 338 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 TOMM40O96008 361 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 MT-ND2P03891 347 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 ATP1B1P05026 303 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 EPB41P11171 864 aaKnown RBP3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 TMOD1P28289 359 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 OTX2P32243 289 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 SLC6A8P48029 635 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 DNA2P51530 1060 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 CCR4P51679 360 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 GAS1P54826 345 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 SGCGQ13326 291 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 RIPK1Q13546 671 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 GPR50Q13585 617 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 GRB14Q14449 540 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 RBM39Q14498 530 aaKnown RBP3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 TMEM132DQ14C87 1099 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 HEPACAMQ14CZ8 416 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 ZKSCAN8Q15776 578 aaPredicted RBP3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 SLC36A3Q495N2 470 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 NADK2Q4G0N4 442 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 GPAT3Q53EU6 434 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 MPPE1Q53F39 396 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 CFAP157Q5JU67 520 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 SPATA46Q5T0L3 261 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 WBP2NLQ6ICG8 309 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 CENPPQ6IPU0 288 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 TCEAL6Q6IPX3 200 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 LRRC8BQ6P9F7 803 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 CREB3L2Q70SY1 520 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 SLC24A5Q71RS6 500 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 ADGRD2Q7Z7M1 963 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 YRDCQ86U90 279 aaKnown RBP3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 RPAINQ86UA6 219 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 GPC2Q8N158 579 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 ELMOD1Q8N336 334 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 FAM89BQ8N5H3 189 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 CCDC185Q8N715 623 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 FADS6Q8N9I5 356 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 OR13C5Q8NGS8 318 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 NXPE2Q96DL1 559 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 BPIFA2Q96DR5 249 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 THOC3Q96J01 351 aaKnown RBP3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 LMLNQ96KR4 655 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 MARK4Q96L34 752 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms