RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 GJA4P35212 333 aa16.23■□□□□ 0.19
LIN54-204ENST00000505397 C9orf64Q5T6V5 341 aa16.23■□□□□ 0.19
LIN54-204ENST00000505397 MYDGFQ969H8 173 aa16.23■□□□□ 0.19
LIN54-204ENST00000505397 WRAP53Q9BUR4 548 aaKnown RBP16.23■□□□□ 0.19
LIN54-204ENST00000505397 BHLHE41Q9C0J9 482 aaPredicted RBP16.23■□□□□ 0.19
LIN54-204ENST00000505397 NXF2Q9GZY0 626 aaKnown RBP16.23■□□□□ 0.19
LIN54-204ENST00000505397 RUBCNLQ9H714 662 aa16.23■□□□□ 0.19
LIN54-204ENST00000505397 A3GALT2U3KPV4 340 aa16.23■□□□□ 0.19
LIN54-204ENST00000505397 SLC5A10A0PJK1 596 aa16.22■□□□□ 0.19
LIN54-204ENST00000505397 METTL15A6NJ78 407 aa16.22■□□□□ 0.19
LIN54-204ENST00000505397 PSMD11O00231 422 aa16.22■□□□□ 0.19
LIN54-204ENST00000505397 QSOX1O00391 747 aa16.22■□□□□ 0.19
LIN54-204ENST00000505397 PTX3P26022 381 aaPredicted RBP16.22■□□□□ 0.19
LIN54-204ENST00000505397 DNASE1L3Q13609 305 aa16.22■□□□□ 0.19
LIN54-204ENST00000505397 SYT16Q17RD7 645 aa16.22■□□□□ 0.19
LIN54-204ENST00000505397 ZNF385BQ569K4 471 aa16.22■□□□□ 0.19
LIN54-204ENST00000505397 ZNF648Q5T619 568 aaPredicted RBP16.22■□□□□ 0.19
LIN54-204ENST00000505397 DSG4Q86SJ6 1040 aa16.22■□□□□ 0.19
LIN54-204ENST00000505397 SLC5A8Q8N695 610 aa16.22■□□□□ 0.19
LIN54-204ENST00000505397 MCFD2Q8NI22 146 aa16.22■□□□□ 0.19
LIN54-204ENST00000505397 FOXJ1Q92949 421 aa16.22■□□□□ 0.19
LIN54-204ENST00000505397 AP2M1Q96CW1 435 aa16.22■□□□□ 0.19
LIN54-204ENST00000505397 MED8Q96G25 268 aa16.22■□□□□ 0.19
LIN54-204ENST00000505397 KXD1Q9BQD3 176 aa16.22■□□□□ 0.19
LIN54-204ENST00000505397 ZBTB20Q9HC78 741 aaPredicted RBP16.22■□□□□ 0.19
LIN54-204ENST00000505397 SCHIP1Q9P0W5 487 aaPredicted RBP16.22■□□□□ 0.19
LIN54-204ENST00000505397 PNMA8BQ9ULN7 279 aaPredicted RBP16.22■□□□□ 0.19
LIN54-204ENST00000505397 TESMINQ9Y4I5 508 aa16.22■□□□□ 0.19
LIN54-204ENST00000505397 PRAMEF25A6NGN4 478 aa16.22■□□□□ 0.19
LIN54-204ENST00000505397 AIREO43918 545 aa16.22■□□□□ 0.19
LIN54-204ENST00000505397 ANXA8P13928 327 aa16.22■□□□□ 0.19
LIN54-204ENST00000505397 OPRD1P41143 372 aa16.22■□□□□ 0.19
LIN54-204ENST00000505397 ZNF404Q494X3 552 aa16.22■□□□□ 0.19
LIN54-204ENST00000505397 TUBA3EQ6PEY2 450 aa16.22■□□□□ 0.19
LIN54-204ENST00000505397 SLC46A3Q7Z3Q1 461 aa16.22■□□□□ 0.19
LIN54-204ENST00000505397 OR10G2Q8NGC3 310 aa16.22■□□□□ 0.19
LIN54-204ENST00000505397 OR4A15Q8NGL6 344 aa16.22■□□□□ 0.19
LIN54-204ENST00000505397 PROX1Q92786 737 aa16.22■□□□□ 0.19
LIN54-204ENST00000505397 PKP4Q99569 1192 aa16.22■□□□□ 0.19
LIN54-204ENST00000505397 THSD1Q9NS62 852 aa16.22■□□□□ 0.19
LIN54-204ENST00000505397 ZNF226Q9NYT6 803 aa16.22■□□□□ 0.19
LIN54-204ENST00000505397 SPASTQ9UBP0 616 aa16.22■□□□□ 0.19
LIN54-204ENST00000505397 ZNF451Q9Y4E5 1061 aa16.22■□□□□ 0.19
LIN54-204ENST00000505397 MGAT4DA6NG13 374 aa16.21■□□□□ 0.19
LIN54-204ENST00000505397 TSPAN6O43657 245 aa16.21■□□□□ 0.19
LIN54-204ENST00000505397 SLC16A8O95907 504 aa16.21■□□□□ 0.19
LIN54-204ENST00000505397 ZNF8P17098 575 aaPredicted RBP16.21■□□□□ 0.19
LIN54-204ENST00000505397 CDC20Q12834 499 aa16.21■□□□□ 0.19
LIN54-204ENST00000505397 COX20Q5RI15 118 aa16.21■□□□□ 0.19
LIN54-204ENST00000505397 ZNF852Q6ZMS4 543 aa16.21■□□□□ 0.19
LIN54-204ENST00000505397 SLCO4C1Q6ZQN7 724 aa16.21■□□□□ 0.19
LIN54-204ENST00000505397 NUDT18Q6ZVK8 323 aa16.21■□□□□ 0.19
LIN54-204ENST00000505397 NCCRP1Q6ZVX7 275 aaPredicted RBP16.21■□□□□ 0.19
LIN54-204ENST00000505397 CCDC80Q76M96 950 aa16.21■□□□□ 0.19
LIN54-204ENST00000505397 TECPR1Q7Z6L1 1165 aa16.21■□□□□ 0.19
LIN54-204ENST00000505397 SFTPA1Q8IWL2 248 aa16.21■□□□□ 0.19
LIN54-204ENST00000505397 NRSN1Q8IZ57 195 aa16.21■□□□□ 0.19
LIN54-204ENST00000505397 MYADMQ96S97 322 aa16.21■□□□□ 0.19
LIN54-204ENST00000505397 TMEM245Q9H330 911 aa16.21■□□□□ 0.19
LIN54-204ENST00000505397 RLIMQ9NVW2 624 aa16.21■□□□□ 0.19
LIN54-204ENST00000505397 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.21■□□□□ 0.19
LIN54-204ENST00000505397 POFUT2Q9Y2G5 429 aa16.21■□□□□ 0.19
LIN54-204ENST00000505397 C1QTNF3-AMACRE9PGA6 284 aa16.21■□□□□ 0.19
LIN54-204ENST00000505397 CNOT3O75175 753 aaKnown RBP16.21■□□□□ 0.19
LIN54-204ENST00000505397 CTSKP43235 329 aa16.21■□□□□ 0.19
LIN54-204ENST00000505397 CTSCP53634 463 aa16.21■□□□□ 0.19
LIN54-204ENST00000505397 HBA1P69905 142 aa16.21■□□□□ 0.19
LIN54-204ENST00000505397 RBBP4Q09028 425 aa16.21■□□□□ 0.19
LIN54-204ENST00000505397 TIGD6Q17RP2 521 aa16.21■□□□□ 0.19
LIN54-204ENST00000505397 MICAQ29983 383 aa16.21■□□□□ 0.19
LIN54-204ENST00000505397 RAVER1Q8IY67 606 aaKnown RBP16.21■□□□□ 0.19
LIN54-204ENST00000505397 SPPL2AQ8TCT8 520 aa16.21■□□□□ 0.19
LIN54-204ENST00000505397 BTN2A2Q8WVV5 523 aa16.21■□□□□ 0.19
LIN54-204ENST00000505397 GDF15Q99988 308 aa16.21■□□□□ 0.19
LIN54-204ENST00000505397 RAPGEFL1Q9UHV5 662 aa16.21■□□□□ 0.19
LIN54-204ENST00000505397 UGT2A1Q9Y4X1 527 aa16.21■□□□□ 0.19
LIN54-204ENST00000505397 ISPDA4D126 451 aa16.2■□□□□ 0.18
LIN54-204ENST00000505397 TAF4O00268 1085 aa16.2■□□□□ 0.18
LIN54-204ENST00000505397 KAT7O95251 611 aa16.2■□□□□ 0.18
LIN54-204ENST00000505397 CATP04040 527 aaKnown RBP16.2■□□□□ 0.18
LIN54-204ENST00000505397 EPHX1P07099 455 aa16.2■□□□□ 0.18
LIN54-204ENST00000505397 GDI1P31150 447 aa16.2■□□□□ 0.18
LIN54-204ENST00000505397 BDKRB1P46663 353 aa16.2■□□□□ 0.18
LIN54-204ENST00000505397 CLK1P49759 484 aaKnown RBP16.2■□□□□ 0.18
LIN54-204ENST00000505397 METAP1P53582 386 aa16.2■□□□□ 0.18
LIN54-204ENST00000505397 RPS13P62277 151 aaKnown RBP16.2■□□□□ 0.18
LIN54-204ENST00000505397 EEF1A2Q05639 463 aaKnown RBP16.2■□□□□ 0.18
LIN54-204ENST00000505397 IFI44LQ53G44 452 aa16.2■□□□□ 0.18
LIN54-204ENST00000505397 NLRP8Q86W28 1048 aa16.2■□□□□ 0.18
LIN54-204ENST00000505397 LILRA3Q8N6C8 439 aaPredicted RBP16.2■□□□□ 0.18
LIN54-204ENST00000505397 RASGEF1AQ8N9B8 481 aa16.2■□□□□ 0.18
LIN54-204ENST00000505397 DENND6BQ8NEG7 585 aa16.2■□□□□ 0.18
LIN54-204ENST00000505397 OR52N2Q8NGI0 321 aa16.2■□□□□ 0.18
LIN54-204ENST00000505397 ARRDC3Q96B67 414 aa16.2■□□□□ 0.18
LIN54-204ENST00000505397 TMEM159Q96B96 161 aa16.2■□□□□ 0.18
LIN54-204ENST00000505397 VPS35Q96QK1 796 aa16.2■□□□□ 0.18
LIN54-204ENST00000505397 PLA2G2FQ9BZM2 168 aa16.2■□□□□ 0.18
LIN54-204ENST00000505397 TMEM38AQ9H6F2 299 aa16.2■□□□□ 0.18
LIN54-204ENST00000505397 REEP4Q9H6H4 257 aa16.2■□□□□ 0.18
LIN54-204ENST00000505397 SH3BP4Q9P0V3 963 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms