RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 SEPHS1P49903 392 aa7.81□□□□□ -1.16
CDC42SE2-208ENST00000505065 IDH3AP50213 366 aa7.81□□□□□ -1.16
CDC42SE2-208ENST00000505065 CYP4F3Q08477 520 aa7.81□□□□□ -1.16
CDC42SE2-208ENST00000505065 SLC9A5Q14940 896 aa7.81□□□□□ -1.16
CDC42SE2-208ENST00000505065 NKG7Q16617 165 aa7.81□□□□□ -1.16
CDC42SE2-208ENST00000505065 MPEG1Q2M385 716 aa7.81□□□□□ -1.16
CDC42SE2-208ENST00000505065 C6orf136Q5SQH8 315 aa7.81□□□□□ -1.16
CDC42SE2-208ENST00000505065 HHATQ5VTY9 493 aa7.81□□□□□ -1.16
CDC42SE2-208ENST00000505065 SPATA19Q7Z5L4 167 aa7.81□□□□□ -1.16
CDC42SE2-208ENST00000505065 PLD3Q8IV08 490 aa7.81□□□□□ -1.16
CDC42SE2-208ENST00000505065 CDYL2Q8N8U2 506 aa7.81□□□□□ -1.16
CDC42SE2-208ENST00000505065 ACOT4Q8N9L9 421 aa7.81□□□□□ -1.16
CDC42SE2-208ENST00000505065 SLC45A3Q96JT2 553 aa7.81□□□□□ -1.16
CDC42SE2-208ENST00000505065 F2RL3Q96RI0 385 aa7.81□□□□□ -1.16
CDC42SE2-208ENST00000505065 TRIM45Q9H8W5 580 aaPredicted RBP7.81□□□□□ -1.16
CDC42SE2-208ENST00000505065 ACSS2Q9NR19 701 aa7.81□□□□□ -1.16
CDC42SE2-208ENST00000505065 NAALAD2Q9Y3Q0 740 aa7.81□□□□□ -1.16
CDC42SE2-208ENST00000505065 PCDHA9Q9Y5H5 950 aa7.81□□□□□ -1.16
CDC42SE2-208ENST00000505065 USH1CQ9Y6N9 552 aa7.81□□□□□ -1.16
CDC42SE2-208ENST00000505065 ITPR1Q14643 2758 aa7.81□□□□□ -1.16
CDC42SE2-208ENST00000505065 PABPN1LA6NDY0 278 aaKnown RBP7.81□□□□□ -1.16
CDC42SE2-208ENST00000505065 RAD1O60671 282 aa7.81□□□□□ -1.16
CDC42SE2-208ENST00000505065 ULK1O75385 1050 aa7.81□□□□□ -1.16
CDC42SE2-208ENST00000505065 CHAF1BQ13112 559 aa7.81□□□□□ -1.16
CDC42SE2-208ENST00000505065 MSANTD1Q6ZTZ1 278 aa7.81□□□□□ -1.16
CDC42SE2-208ENST00000505065 ZNF595Q8IYB9 648 aa7.81□□□□□ -1.16
CDC42SE2-208ENST00000505065 OR2Y1Q8NGV0 311 aa7.81□□□□□ -1.16
CDC42SE2-208ENST00000505065 ZNF675Q8TD23 568 aa7.81□□□□□ -1.16
CDC42SE2-208ENST00000505065 SREK1Q8WXA9 508 aaKnown RBP7.81□□□□□ -1.16
CDC42SE2-208ENST00000505065 AKIRIN1Q9H9L7 192 aaPredicted RBP7.81□□□□□ -1.16
CDC42SE2-208ENST00000505065 SDR39U1Q9NRG7 319 aaPredicted RBP7.81□□□□□ -1.16
CDC42SE2-208ENST00000505065 C1orf109Q9NX04 203 aa7.81□□□□□ -1.16
CDC42SE2-208ENST00000505065 KLHL14Q9P2G3 628 aa7.81□□□□□ -1.16
CDC42SE2-208ENST00000505065 BMP10O95393 424 aa7.81□□□□□ -1.16
CDC42SE2-208ENST00000505065 SDC1P18827 310 aa7.81□□□□□ -1.16
CDC42SE2-208ENST00000505065 S1PR1P21453 382 aa7.81□□□□□ -1.16
CDC42SE2-208ENST00000505065 HSD17B7P56937 341 aa7.81□□□□□ -1.16
CDC42SE2-208ENST00000505065 ERVK-8P63133 956 aa7.81□□□□□ -1.16
CDC42SE2-208ENST00000505065 NKAIN1Q4KMZ8 207 aa7.81□□□□□ -1.16
CDC42SE2-208ENST00000505065 SPDYAQ5MJ70 313 aa7.81□□□□□ -1.16
CDC42SE2-208ENST00000505065 METTL21CQ5VZV1 264 aa7.81□□□□□ -1.16
CDC42SE2-208ENST00000505065 C8orf82Q6P1X6 216 aaPredicted RBP7.81□□□□□ -1.16
CDC42SE2-208ENST00000505065 ZNF304Q9HCX3 659 aa7.81□□□□□ -1.16
CDC42SE2-208ENST00000505065 MLXIPLQ9NP71 852 aa7.81□□□□□ -1.16
CDC42SE2-208ENST00000505065 SLCO1B3Q9NPD5 702 aa7.81□□□□□ -1.16
CDC42SE2-208ENST00000505065 MS4A12Q9NXJ0 267 aa7.81□□□□□ -1.16
CDC42SE2-208ENST00000505065 PTGDR2Q9Y5Y4 395 aa7.81□□□□□ -1.16
CDC42SE2-208ENST00000505065 A0A1W2PR48 441 aa7.8□□□□□ -1.16
CDC42SE2-208ENST00000505065 A8MU76 341 aa7.8□□□□□ -1.16
CDC42SE2-208ENST00000505065 RASSF9O75901 435 aa7.8□□□□□ -1.16
CDC42SE2-208ENST00000505065 ATP1B1P05026 303 aa7.8□□□□□ -1.16
CDC42SE2-208ENST00000505065 DRD2P14416 443 aa7.8□□□□□ -1.16
CDC42SE2-208ENST00000505065 TSPAN8P19075 237 aa7.8□□□□□ -1.16
CDC42SE2-208ENST00000505065 PTPN4P29074 926 aa7.8□□□□□ -1.16
CDC42SE2-208ENST00000505065 NEK2P51955 445 aa7.8□□□□□ -1.16
CDC42SE2-208ENST00000505065 WNT3P56703 355 aa7.8□□□□□ -1.16
CDC42SE2-208ENST00000505065 RFTN2Q52LD8 501 aaPredicted RBP7.8□□□□□ -1.16
CDC42SE2-208ENST00000505065 C3orf38Q5JPI3 329 aa7.8□□□□□ -1.16
CDC42SE2-208ENST00000505065 DTWD1Q8N5C7 304 aa7.8□□□□□ -1.16
CDC42SE2-208ENST00000505065 ZNF441Q8N8Z8 693 aa7.8□□□□□ -1.16
CDC42SE2-208ENST00000505065 METTL6Q8TCB7 284 aa7.8□□□□□ -1.16
CDC42SE2-208ENST00000505065 IMMP1LQ96LU5 166 aa7.8□□□□□ -1.16
CDC42SE2-208ENST00000505065 PPP3R2Q96LZ3 170 aa7.8□□□□□ -1.16
CDC42SE2-208ENST00000505065 AKTIPQ9H8T0 292 aa7.8□□□□□ -1.16
CDC42SE2-208ENST00000505065 KCNK9Q9NPC2 374 aa7.8□□□□□ -1.16
CDC42SE2-208ENST00000505065 THSD1Q9NS62 852 aa7.8□□□□□ -1.16
CDC42SE2-208ENST00000505065 AKAP7Q9P0M2 348 aaPredicted RBP7.8□□□□□ -1.16
CDC42SE2-208ENST00000505065 CDC14AQ9UNH5 594 aa7.8□□□□□ -1.16
CDC42SE2-208ENST00000505065 TIMM22Q9Y584 194 aa7.8□□□□□ -1.16
CDC42SE2-208ENST00000505065 SCN3AQ9NY46 2000 aa7.8□□□□□ -1.16
CDC42SE2-208ENST00000505065 ANKDD1BA6NHY2 528 aa7.8□□□□□ -1.16
CDC42SE2-208ENST00000505065 RGS14O43566 566 aa7.8□□□□□ -1.16
CDC42SE2-208ENST00000505065 SLITRK5O94991 958 aa7.8□□□□□ -1.16
CDC42SE2-208ENST00000505065 FURINP09958 794 aa7.8□□□□□ -1.16
CDC42SE2-208ENST00000505065 PIM1P11309 404 aaPredicted RBP7.8□□□□□ -1.16
CDC42SE2-208ENST00000505065 WT1P19544 449 aaPredicted RBP7.8□□□□□ -1.16
CDC42SE2-208ENST00000505065 PTPN6P29350 595 aa7.8□□□□□ -1.16
CDC42SE2-208ENST00000505065 PRAMEF17Q5VTA0 474 aa7.8□□□□□ -1.16
CDC42SE2-208ENST00000505065 NOXRED1Q6NXP6 359 aa7.8□□□□□ -1.16
CDC42SE2-208ENST00000505065 SLC48A1Q6P1K1 146 aa7.8□□□□□ -1.16
CDC42SE2-208ENST00000505065 IGFL2Q6UWQ7 119 aa7.8□□□□□ -1.16
CDC42SE2-208ENST00000505065 NUDT13Q86X67 352 aa7.8□□□□□ -1.16
CDC42SE2-208ENST00000505065 PROSER1Q86XN7 944 aa7.8□□□□□ -1.16
CDC42SE2-208ENST00000505065 OR8J2Q8NGG1 315 aa7.8□□□□□ -1.16
CDC42SE2-208ENST00000505065 SUN3Q8TAQ9 357 aa7.8□□□□□ -1.16
CDC42SE2-208ENST00000505065 KLHL25Q9H0H3 589 aa7.8□□□□□ -1.16
CDC42SE2-208ENST00000505065 PRORYQ9H606 182 aa7.8□□□□□ -1.16
CDC42SE2-208ENST00000505065 CLMPQ9H6B4 373 aa7.8□□□□□ -1.16
CDC42SE2-208ENST00000505065 HEY2Q9UBP5 337 aa7.8□□□□□ -1.16
CDC42SE2-208ENST00000505065 DLGAP4Q9Y2H0 992 aa7.8□□□□□ -1.16
CDC42SE2-208ENST00000505065 EML6Q6ZMW3 1958 aa7.8□□□□□ -1.16
CDC42SE2-208ENST00000505065 TRPC5OSA6NMA1 111 aa7.8□□□□□ -1.16
CDC42SE2-208ENST00000505065 KIAA0754O94854 1291 aa7.8□□□□□ -1.16
CDC42SE2-208ENST00000505065 IGHEP01854 428 aa7.8□□□□□ -1.16
CDC42SE2-208ENST00000505065 IGKV3-11P04433 115 aa7.8□□□□□ -1.16
CDC42SE2-208ENST00000505065 GPX3P22352 226 aa7.8□□□□□ -1.16
CDC42SE2-208ENST00000505065 KLC1Q07866 573 aa7.8□□□□□ -1.16
CDC42SE2-208ENST00000505065 CPSF6Q16630 551 aaKnown RBP eCLIP7.8□□□□□ -1.16
CDC42SE2-208ENST00000505065 SLC9B1Q4ZJI4 515 aa7.8□□□□□ -1.16
CDC42SE2-208ENST00000505065 PPP1R32Q7Z5V6 425 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms