RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 MCATQ8IVS2 390 aaKnown RBP9.65□□□□□ -0.86
DDX41-203ENST00000504781 ACOT4Q8N9L9 421 aa9.65□□□□□ -0.86
DDX41-203ENST00000504781 GOT1L1Q8NHS2 421 aaPredicted RBP9.65□□□□□ -0.86
DDX41-203ENST00000504781 CLHC1Q8NHS4 586 aa9.65□□□□□ -0.86
DDX41-203ENST00000504781 DNAJB14Q8TBM8 379 aa9.65□□□□□ -0.86
DDX41-203ENST00000504781 TMEM125Q96AQ2 219 aa9.65□□□□□ -0.86
DDX41-203ENST00000504781 PPCDCQ96CD2 204 aa9.65□□□□□ -0.86
DDX41-203ENST00000504781 CLPTM1LQ96KA5 538 aa9.65□□□□□ -0.86
DDX41-203ENST00000504781 CCDC115Q96NT0 180 aa9.65□□□□□ -0.86
DDX41-203ENST00000504781 ANKRD27Q96NW4 1050 aa9.65□□□□□ -0.86
DDX41-203ENST00000504781 GBP5Q96PP8 586 aa9.65□□□□□ -0.86
DDX41-203ENST00000504781 SERINC2Q96SA4 455 aa9.65□□□□□ -0.86
DDX41-203ENST00000504781 DPYSL5Q9BPU6 564 aa9.65□□□□□ -0.86
DDX41-203ENST00000504781 EDEM2Q9BV94 578 aa9.65□□□□□ -0.86
DDX41-203ENST00000504781 FAIM2Q9BWQ8 316 aa9.65□□□□□ -0.86
DDX41-203ENST00000504781 MUC13Q9H3R2 512 aa9.65□□□□□ -0.86
DDX41-203ENST00000504781 KLHL31Q9H511 634 aa9.65□□□□□ -0.86
DDX41-203ENST00000504781 DCLRE1BQ9H816 532 aa9.65□□□□□ -0.86
DDX41-203ENST00000504781 CLK4Q9HAZ1 481 aaKnown RBP9.65□□□□□ -0.86
DDX41-203ENST00000504781 LHX9Q9NQ69 397 aa9.65□□□□□ -0.86
DDX41-203ENST00000504781 ENAMQ9NRM1 1142 aa9.65□□□□□ -0.86
DDX41-203ENST00000504781 MS4A12Q9NXJ0 267 aa9.65□□□□□ -0.86
DDX41-203ENST00000504781 SH3BP4Q9P0V3 963 aa9.65□□□□□ -0.86
DDX41-203ENST00000504781 PSME2Q9UL46 239 aa9.65□□□□□ -0.86
DDX41-203ENST00000504781 EXO1Q9UQ84 846 aaKnown RBP9.65□□□□□ -0.86
DDX41-203ENST00000504781 POMPQ9Y244 141 aa9.65□□□□□ -0.86
DDX41-203ENST00000504781 KLHL20Q9Y2M5 609 aa9.65□□□□□ -0.86
DDX41-203ENST00000504781 SLC22A7Q9Y694 548 aa9.65□□□□□ -0.86
DDX41-203ENST00000504781 PI4KAP42356 2102 aa9.65□□□□□ -0.86
DDX41-203ENST00000504781 IGHV1OR21-1A0A087WYE8 117 aa9.64□□□□□ -0.87
DDX41-203ENST00000504781 A0A0J9YVX5 310 aa9.64□□□□□ -0.87
DDX41-203ENST00000504781 TLCD2A6NGC4 264 aa9.64□□□□□ -0.87
DDX41-203ENST00000504781 SLC9B1P1A6NJY1 282 aa9.64□□□□□ -0.87
DDX41-203ENST00000504781 C4orf47A7E2U8 309 aa9.64□□□□□ -0.87
DDX41-203ENST00000504781 PATE3B3GLJ2 98 aa9.64□□□□□ -0.87
DDX41-203ENST00000504781 C9JVG2 144 aa9.64□□□□□ -0.87
DDX41-203ENST00000504781 H0YGG7 62 aa9.64□□□□□ -0.87
DDX41-203ENST00000504781 FXYD1O00168 92 aa9.64□□□□□ -0.87
DDX41-203ENST00000504781 RFXANKO14593 260 aa9.64□□□□□ -0.87
DDX41-203ENST00000504781 ACOT8O14734 319 aa9.64□□□□□ -0.87
DDX41-203ENST00000504781 KHNYNO15037 678 aaKnown RBP9.64□□□□□ -0.87
DDX41-203ENST00000504781 TOX3O15405 576 aaPredicted RBP9.64□□□□□ -0.87
DDX41-203ENST00000504781 ERI3O43414 337 aaKnown RBP9.64□□□□□ -0.87
DDX41-203ENST00000504781 FKBP6O75344 327 aa9.64□□□□□ -0.87
DDX41-203ENST00000504781 BCAS2O75934 225 aaPredicted RBP9.64□□□□□ -0.87
DDX41-203ENST00000504781 LRATO95237 230 aa9.64□□□□□ -0.87
DDX41-203ENST00000504781 ZBTB11O95625 1053 aaPredicted RBP9.64□□□□□ -0.87
DDX41-203ENST00000504781 ANP32DO95626 131 aa9.64□□□□□ -0.87
DDX41-203ENST00000504781 STAMBPO95630 424 aa9.64□□□□□ -0.87
DDX41-203ENST00000504781 C9P02748 559 aa9.64□□□□□ -0.87
DDX41-203ENST00000504781 ZNF883P0CG24 379 aa9.64□□□□□ -0.87
DDX41-203ENST00000504781 LAMP1P11279 417 aa9.64□□□□□ -0.87
DDX41-203ENST00000504781 PIM1P11309 404 aaPredicted RBP9.64□□□□□ -0.87
DDX41-203ENST00000504781 PPIBP23284 216 aaKnown RBP9.64□□□□□ -0.87
DDX41-203ENST00000504781 HTR1EP28566 365 aa9.64□□□□□ -0.87
DDX41-203ENST00000504781 CD1CP29017 333 aa9.64□□□□□ -0.87
DDX41-203ENST00000504781 SSR2P43308 183 aa9.64□□□□□ -0.87
DDX41-203ENST00000504781 CCT8P50990 548 aa9.64□□□□□ -0.87
DDX41-203ENST00000504781 DUSP3P51452 185 aaPredicted RBP9.64□□□□□ -0.87
DDX41-203ENST00000504781 LIMK1P53667 647 aa9.64□□□□□ -0.87
DDX41-203ENST00000504781 PLA2G16P53816 162 aa9.64□□□□□ -0.87
DDX41-203ENST00000504781 ARF3P61204 181 aaPredicted RBP9.64□□□□□ -0.87
DDX41-203ENST00000504781 MLC1Q15049 377 aa9.64□□□□□ -0.87
DDX41-203ENST00000504781 CLPPQ16740 277 aaPredicted RBP9.64□□□□□ -0.87
DDX41-203ENST00000504781 OR4F3Q6IEY1 312 aa9.64□□□□□ -0.87
DDX41-203ENST00000504781 DBX2Q6ZNG2 339 aa9.64□□□□□ -0.87
DDX41-203ENST00000504781 DHDDSQ86SQ9 333 aa9.64□□□□□ -0.87
DDX41-203ENST00000504781 TRIM73Q86UV7 250 aa9.64□□□□□ -0.87
DDX41-203ENST00000504781 KMT5CQ86Y97 462 aa9.64□□□□□ -0.87
DDX41-203ENST00000504781 SLC35F3Q8IY50 421 aa9.64□□□□□ -0.87
DDX41-203ENST00000504781 C19orf47Q8N9M1 422 aaKnown RBP9.64□□□□□ -0.87
DDX41-203ENST00000504781 TNIP2Q8NFZ5 429 aa9.64□□□□□ -0.87
DDX41-203ENST00000504781 UTP15Q8TED0 518 aaKnown RBP9.64□□□□□ -0.87
DDX41-203ENST00000504781 WDR60Q8WVS4 1066 aa9.64□□□□□ -0.87
DDX41-203ENST00000504781 NCSTNQ92542 709 aa9.64□□□□□ -0.87
DDX41-203ENST00000504781 JADE3Q92613 823 aa9.64□□□□□ -0.87
DDX41-203ENST00000504781 POP5Q969H6 163 aaKnown RBP9.64□□□□□ -0.87
DDX41-203ENST00000504781 GFM2Q969S9 779 aaKnown RBP9.64□□□□□ -0.87
DDX41-203ENST00000504781 ASB9Q96DX5 294 aa9.64□□□□□ -0.87
DDX41-203ENST00000504781 TEFMQ96QE5 360 aaKnown RBP9.64□□□□□ -0.87
DDX41-203ENST00000504781 MAP3K3Q99759 626 aa9.64□□□□□ -0.87
DDX41-203ENST00000504781 ECSITQ9BQ95 431 aa9.64□□□□□ -0.87
DDX41-203ENST00000504781 NPLQ9BXD5 320 aaPredicted RBP9.64□□□□□ -0.87
DDX41-203ENST00000504781 PAIP1Q9H074 479 aaKnown RBP9.64□□□□□ -0.87
DDX41-203ENST00000504781 IL1RL2Q9HB29 575 aa9.64□□□□□ -0.87
DDX41-203ENST00000504781 IL21RQ9HBE5 538 aa9.64□□□□□ -0.87
DDX41-203ENST00000504781 PDE7BQ9NP56 450 aa9.64□□□□□ -0.87
DDX41-203ENST00000504781 SERHLQ9NQF3 203 aa9.64□□□□□ -0.87
DDX41-203ENST00000504781 EVA1BQ9NVM1 165 aa9.64□□□□□ -0.87
DDX41-203ENST00000504781 LYARQ9NX58 379 aaKnown RBP9.64□□□□□ -0.87
DDX41-203ENST00000504781 SLAMF8Q9P0V8 285 aa9.64□□□□□ -0.87
DDX41-203ENST00000504781 SUCOQ9UBS9 1254 aaKnown RBP9.64□□□□□ -0.87
DDX41-203ENST00000504781 ASB4Q9Y574 426 aa9.64□□□□□ -0.87
DDX41-203ENST00000504781 PCDHB14Q9Y5E9 798 aa9.64□□□□□ -0.87
DDX41-203ENST00000504781 PCDHGB2Q9Y5G2 931 aa9.64□□□□□ -0.87
DDX41-203ENST00000504781 LOC105369274A0A096LPK9 316 aa9.63□□□□□ -0.87
DDX41-203ENST00000504781 TRBV5-3A0A0A0MS03 114 aa9.63□□□□□ -0.87
DDX41-203ENST00000504781 LOC102723532A0A0G2JNH3 316 aa9.63□□□□□ -0.87
DDX41-203ENST00000504781 A0A1W2PRB8 838 aa9.63□□□□□ -0.87
DDX41-203ENST00000504781 C1orf226A1L170 272 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms