RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 PCSK2P16519 638 aa9.86□□□□□ -0.83
TPM3-217ENST00000504663 SLC6A2P23975 617 aa9.86□□□□□ -0.83
TPM3-217ENST00000504663 FRKP42685 505 aaPredicted RBP9.86□□□□□ -0.83
TPM3-217ENST00000504663 TSFMP43897 325 aaKnown RBP9.86□□□□□ -0.83
TPM3-217ENST00000504663 ASMTP46597 345 aa9.86□□□□□ -0.83
TPM3-217ENST00000504663 PDX1P52945 283 aa9.86□□□□□ -0.83
TPM3-217ENST00000504663 PLA2G16P53816 162 aa9.86□□□□□ -0.83
TPM3-217ENST00000504663 MTTPP55157 894 aa9.86□□□□□ -0.83
TPM3-217ENST00000504663 TAS2R50P59544 299 aa9.86□□□□□ -0.83
TPM3-217ENST00000504663 RAB8AP61006 207 aa9.86□□□□□ -0.83
TPM3-217ENST00000504663 PSME3P61289 254 aa9.86□□□□□ -0.83
TPM3-217ENST00000504663 TRA2BP62995 288 aaKnown RBP9.86□□□□□ -0.83
TPM3-217ENST00000504663 CCL7P80098 99 aa9.86□□□□□ -0.83
TPM3-217ENST00000504663 COL9A2Q14055 689 aaPredicted RBP9.86□□□□□ -0.83
TPM3-217ENST00000504663 CAPRIN1Q14444 709 aaKnown RBP9.86□□□□□ -0.83
TPM3-217ENST00000504663 INAVAQ3KP66 663 aa9.86□□□□□ -0.83
TPM3-217ENST00000504663 PIGGQ5H8A4 983 aa9.86□□□□□ -0.83
TPM3-217ENST00000504663 NUP210LQ5VU65 1888 aa9.86□□□□□ -0.83
TPM3-217ENST00000504663 ARMC6Q6NXE6 501 aa9.86□□□□□ -0.83
TPM3-217ENST00000504663 MSANTD1Q6ZTZ1 278 aa9.86□□□□□ -0.83
TPM3-217ENST00000504663 MCATQ8IVS2 390 aaKnown RBP9.86□□□□□ -0.83
TPM3-217ENST00000504663 ULK2Q8IYT8 1036 aa9.86□□□□□ -0.83
TPM3-217ENST00000504663 DEFB107AQ8IZN7 70 aa9.86□□□□□ -0.83
TPM3-217ENST00000504663 FAM9CQ8IZT9 166 aa9.86□□□□□ -0.83
TPM3-217ENST00000504663 D2HGDHQ8N465 521 aa9.86□□□□□ -0.83
TPM3-217ENST00000504663 ACOT4Q8N9L9 421 aa9.86□□□□□ -0.83
TPM3-217ENST00000504663 FAM13CQ8NE31 585 aa9.86□□□□□ -0.83
TPM3-217ENST00000504663 OR6C4Q8NGE1 309 aa9.86□□□□□ -0.83
TPM3-217ENST00000504663 ZCCHC10Q8TBK6 192 aa9.86□□□□□ -0.83
TPM3-217ENST00000504663 NCSTNQ92542 709 aa9.86□□□□□ -0.83
TPM3-217ENST00000504663 TMEM125Q96AQ2 219 aa9.86□□□□□ -0.83
TPM3-217ENST00000504663 ROPN1LQ96C74 230 aa9.86□□□□□ -0.83
TPM3-217ENST00000504663 TCTN2Q96GX1 697 aa9.86□□□□□ -0.83
TPM3-217ENST00000504663 KCNC2Q96PR1 638 aa9.86□□□□□ -0.83
TPM3-217ENST00000504663 INPP5KQ9BT40 448 aa9.86□□□□□ -0.83
TPM3-217ENST00000504663 TBCDQ9BTW9 1192 aa9.86□□□□□ -0.83
TPM3-217ENST00000504663 TRIM8Q9BZR9 551 aa9.86□□□□□ -0.83
TPM3-217ENST00000504663 ZNF768Q9H5H4 540 aaKnown RBP9.86□□□□□ -0.83
TPM3-217ENST00000504663 IKZF5Q9H5V7 419 aa9.86□□□□□ -0.83
TPM3-217ENST00000504663 REEP4Q9H6H4 257 aa9.86□□□□□ -0.83
TPM3-217ENST00000504663 WDR41Q9HAD4 459 aa9.86□□□□□ -0.83
TPM3-217ENST00000504663 CMTM6Q9NX76 183 aa9.86□□□□□ -0.83
TPM3-217ENST00000504663 KCMF1Q9P0J7 381 aa9.86□□□□□ -0.83
TPM3-217ENST00000504663 TMEM181Q9P2C4 612 aa9.86□□□□□ -0.83
TPM3-217ENST00000504663 CD300AQ9UGN4 299 aa9.86□□□□□ -0.83
TPM3-217ENST00000504663 SLC7A8Q9UHI5 535 aa9.86□□□□□ -0.83
TPM3-217ENST00000504663 PACSIN3Q9UKS6 424 aa9.86□□□□□ -0.83
TPM3-217ENST00000504663 CES1P1Q9UKY3 287 aa9.86□□□□□ -0.83
TPM3-217ENST00000504663 ATXN7L1Q9ULK2 861 aaPredicted RBP9.86□□□□□ -0.83
TPM3-217ENST00000504663 ATG4BQ9Y4P1 393 aa9.86□□□□□ -0.83
TPM3-217ENST00000504663 PCDHA9Q9Y5H5 950 aa9.86□□□□□ -0.83
TPM3-217ENST00000504663 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.86□□□□□ -0.83
TPM3-217ENST00000504663 MUC6Q6W4X9 2439 aa9.86□□□□□ -0.83
TPM3-217ENST00000504663 SPTBP11277 2137 aa9.86□□□□□ -0.83
TPM3-217ENST00000504663 GNG14A0A1W2PPG7 69 aa9.85□□□□□ -0.83
TPM3-217ENST00000504663 A0A1W2PR48 441 aa9.85□□□□□ -0.83
TPM3-217ENST00000504663 ARHGAP10A1A4S6 786 aa9.85□□□□□ -0.83
TPM3-217ENST00000504663 WASHC1A8K0Z3 465 aa9.85□□□□□ -0.83
TPM3-217ENST00000504663 ANGPT2O15123 496 aa9.85□□□□□ -0.83
TPM3-217ENST00000504663 FOXS1O43638 330 aa9.85□□□□□ -0.83
TPM3-217ENST00000504663 CBFA2T3O75081 653 aa9.85□□□□□ -0.83
TPM3-217ENST00000504663 MYO1DO94832 1006 aa9.85□□□□□ -0.83
TPM3-217ENST00000504663 AIFM1O95831 613 aa9.85□□□□□ -0.83
TPM3-217ENST00000504663 IL6P05231 212 aa9.85□□□□□ -0.83
TPM3-217ENST00000504663 ANKRD34CP0C6C1 535 aa9.85□□□□□ -0.83
TPM3-217ENST00000504663 SLC35G6P0C7Q6 338 aa9.85□□□□□ -0.83
TPM3-217ENST00000504663 MSL3P1P0C860 447 aa9.85□□□□□ -0.83
TPM3-217ENST00000504663 DDCP20711 480 aa9.85□□□□□ -0.83
TPM3-217ENST00000504663 SSR2P43308 183 aa9.85□□□□□ -0.83
TPM3-217ENST00000504663 RASSF2P50749 326 aa9.85□□□□□ -0.83
TPM3-217ENST00000504663 MNAT1P51948 309 aa9.85□□□□□ -0.83
TPM3-217ENST00000504663 VSX2P58304 361 aaPredicted RBP9.85□□□□□ -0.83
TPM3-217ENST00000504663 STXBP1P61764 594 aaKnown RBP9.85□□□□□ -0.83
TPM3-217ENST00000504663 DUSP2Q05923 314 aa9.85□□□□□ -0.83
TPM3-217ENST00000504663 FOXM1Q08050 763 aa9.85□□□□□ -0.83
TPM3-217ENST00000504663 RGS1Q08116 209 aa9.85□□□□□ -0.83
TPM3-217ENST00000504663 GAB1Q13480 694 aa9.85□□□□□ -0.83
TPM3-217ENST00000504663 RUNX2Q13950 521 aa9.85□□□□□ -0.83
TPM3-217ENST00000504663 DPY19L1Q2PZI1 675 aa9.85□□□□□ -0.83
TPM3-217ENST00000504663 AMZ1Q400G9 498 aa9.85□□□□□ -0.83
TPM3-217ENST00000504663 CCNYL2Q5T2Q4 361 aa9.85□□□□□ -0.83
TPM3-217ENST00000504663 USP53Q70EK8 1073 aa9.85□□□□□ -0.83
TPM3-217ENST00000504663 ZNF551Q7Z340 670 aaPredicted RBP9.85□□□□□ -0.83
TPM3-217ENST00000504663 ARHGAP22Q7Z5H3 698 aa9.85□□□□□ -0.83
TPM3-217ENST00000504663 DHDDSQ86SQ9 333 aa9.85□□□□□ -0.83
TPM3-217ENST00000504663 SLITRK4Q8IW52 837 aa9.85□□□□□ -0.83
TPM3-217ENST00000504663 SLC15A3Q8IY34 581 aa9.85□□□□□ -0.83
TPM3-217ENST00000504663 CLECL1Q8IZS7 167 aa9.85□□□□□ -0.83
TPM3-217ENST00000504663 C10orf111Q8N326 155 aa9.85□□□□□ -0.83
TPM3-217ENST00000504663 TBC1D19Q8N5T2 526 aa9.85□□□□□ -0.83
TPM3-217ENST00000504663 CSNK1A1LQ8N752 337 aa9.85□□□□□ -0.83
TPM3-217ENST00000504663 FAM47BQ8NA70 645 aa9.85□□□□□ -0.83
TPM3-217ENST00000504663 CAMKVQ8NCB2 501 aa9.85□□□□□ -0.83
TPM3-217ENST00000504663 CDC26Q8NHZ8 85 aa9.85□□□□□ -0.83
TPM3-217ENST00000504663 IFI44Q8TCB0 444 aa9.85□□□□□ -0.83
TPM3-217ENST00000504663 LRRC58Q96CX6 371 aa9.85□□□□□ -0.83
TPM3-217ENST00000504663 MTERF3Q96E29 417 aa9.85□□□□□ -0.83
TPM3-217ENST00000504663 ZDHHC12Q96GR4 267 aa9.85□□□□□ -0.83
TPM3-217ENST00000504663 CCDC115Q96NT0 180 aa9.85□□□□□ -0.83
TPM3-217ENST00000504663 MAPKAP1Q9BPZ7 522 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms