RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, human

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIPBL-204	ENST00000504430	L2HGDH	Q9H9P8	463 aa		4.92	□□□□□ -1.62
NIPBL-204	ENST00000504430	SGK2	Q9HBY8	427 aa		4.92	□□□□□ -1.62
NIPBL-204	ENST00000504430	ZDHHC4	Q9NPG8	344 aa		4.92	□□□□□ -1.62
NIPBL-204	ENST00000504430	IL17B	Q9UHF5	180 aa		4.92	□□□□□ -1.62
NIPBL-204	ENST00000504430	KCNJ14	Q9UNX9	436 aa		4.92	□□□□□ -1.62
NIPBL-204	ENST00000504430	HEMK1	Q9Y5R4	338 aa	Predicted RBP	4.92	□□□□□ -1.62
NIPBL-204	ENST00000504430	MBLAC1	A4D2B0	266 aa	Predicted RBP	4.92	□□□□□ -1.62
NIPBL-204	ENST00000504430	PDXK	O00764	312 aa		4.92	□□□□□ -1.62
NIPBL-204	ENST00000504430	WBP4	O75554	376 aa	Known RBP	4.92	□□□□□ -1.62
NIPBL-204	ENST00000504430	TOP3B	O95985	862 aa	Known RBP	4.92	□□□□□ -1.62
NIPBL-204	ENST00000504430	KRT6A	P02538	564 aa		4.92	□□□□□ -1.62
NIPBL-204	ENST00000504430	HPX	P02790	462 aa		4.92	□□□□□ -1.62
NIPBL-204	ENST00000504430	MT-ND2	P03891	347 aa		4.92	□□□□□ -1.62
NIPBL-204	ENST00000504430	FCGR1A	P12314	374 aa		4.92	□□□□□ -1.62
NIPBL-204	ENST00000504430	ETS2	P15036	469 aa		4.92	□□□□□ -1.62
NIPBL-204	ENST00000504430	EZR	P15311	586 aa	Known RBP	4.92	□□□□□ -1.62
NIPBL-204	ENST00000504430	NKX2-1	P43699	371 aa	Predicted RBP	4.92	□□□□□ -1.62
NIPBL-204	ENST00000504430	NDST1	P52848	882 aa		4.92	□□□□□ -1.62
NIPBL-204	ENST00000504430	ZFP36L1	Q07352	338 aa	Known RBP	4.92	□□□□□ -1.62
NIPBL-204	ENST00000504430	CYP24A1	Q07973	514 aa		4.92	□□□□□ -1.62
NIPBL-204	ENST00000504430	MOG	Q16653	247 aa		4.92	□□□□□ -1.62
NIPBL-204	ENST00000504430	PNLIPRP3	Q17RR3	467 aa		4.92	□□□□□ -1.62
NIPBL-204	ENST00000504430	FAM102A	Q5T9C2	384 aa	Predicted RBP	4.92	□□□□□ -1.62
NIPBL-204	ENST00000504430	ABHD17B	Q5VST6	288 aa		4.92	□□□□□ -1.62
NIPBL-204	ENST00000504430	DHRS13	Q6UX07	377 aa		4.92	□□□□□ -1.62
NIPBL-204	ENST00000504430	TMPRSS11B	Q86T26	416 aa		4.92	□□□□□ -1.62
NIPBL-204	ENST00000504430	BOD1L2	Q8IYS8	172 aa		4.92	□□□□□ -1.62
NIPBL-204	ENST00000504430	SLC25A41	Q8N5S1	370 aa		4.92	□□□□□ -1.62
NIPBL-204	ENST00000504430	PARP16	Q8N5Y8	322 aa		4.92	□□□□□ -1.62
NIPBL-204	ENST00000504430	ALLC	Q8N6M5	410 aa		4.92	□□□□□ -1.62
NIPBL-204	ENST00000504430	CCNYL1	Q8N7R7	359 aa		4.92	□□□□□ -1.62
NIPBL-204	ENST00000504430	GLYATL2	Q8WU03	294 aa		4.92	□□□□□ -1.62
NIPBL-204	ENST00000504430	CD101	Q93033	1021 aa		4.92	□□□□□ -1.62
NIPBL-204	ENST00000504430	CCDC17	Q96LX7	622 aa		4.92	□□□□□ -1.62
NIPBL-204	ENST00000504430	SEPT5	Q99719	369 aa	Predicted RBP	4.92	□□□□□ -1.62
NIPBL-204	ENST00000504430	PCGF1	Q9BSM1	259 aa		4.92	□□□□□ -1.62
NIPBL-204	ENST00000504430	RAB1B	Q9H0U4	201 aa		4.92	□□□□□ -1.62
NIPBL-204	ENST00000504430	CD320	Q9NPF0	282 aa		4.92	□□□□□ -1.62
NIPBL-204	ENST00000504430	C8orf4	Q9NR00	106 aa		4.92	□□□□□ -1.62
NIPBL-204	ENST00000504430	PXMP2	Q9NR77	195 aa		4.92	□□□□□ -1.62
NIPBL-204	ENST00000504430	GRHL1	Q9NZI5	618 aa		4.92	□□□□□ -1.62
NIPBL-204	ENST00000504430	SLC17A7	Q9P2U7	560 aa		4.92	□□□□□ -1.62
NIPBL-204	ENST00000504430	POLK	Q9UBT6	870 aa		4.92	□□□□□ -1.62
NIPBL-204	ENST00000504430	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	4.92	□□□□□ -1.62
NIPBL-204	ENST00000504430	PUS1	Q9Y606	427 aa	Known RBP eCLIP	4.92	□□□□□ -1.62
NIPBL-204	ENST00000504430	KPTN	Q9Y664	436 aa		4.92	□□□□□ -1.62
NIPBL-204	ENST00000504430	TRAV26-1	A0A087WT03	109 aa		4.91	□□□□□ -1.62
NIPBL-204	ENST00000504430	IRF1	P10914	325 aa		4.91	□□□□□ -1.62
NIPBL-204	ENST00000504430	VPREB1	P12018	145 aa		4.91	□□□□□ -1.62
NIPBL-204	ENST00000504430	ZNF44	P15621	663 aa		4.91	□□□□□ -1.62
NIPBL-204	ENST00000504430	NT5E	P21589	574 aa		4.91	□□□□□ -1.62
NIPBL-204	ENST00000504430	ARRB2	P32121	409 aa		4.91	□□□□□ -1.62
NIPBL-204	ENST00000504430	CEACAM3	P40198	252 aa		4.91	□□□□□ -1.62
NIPBL-204	ENST00000504430	THOP1	P52888	689 aa		4.91	□□□□□ -1.62
NIPBL-204	ENST00000504430	COPB1	P53618	953 aa	Known RBP	4.91	□□□□□ -1.62
NIPBL-204	ENST00000504430	MLF1	P58340	268 aa		4.91	□□□□□ -1.62
NIPBL-204	ENST00000504430	RPL23A	P62750	156 aa	Known RBP	4.91	□□□□□ -1.62
NIPBL-204	ENST00000504430	HLX	Q14774	488 aa	Predicted RBP	4.91	□□□□□ -1.62
NIPBL-204	ENST00000504430	XKR4	Q5GH76	650 aa		4.91	□□□□□ -1.62
NIPBL-204	ENST00000504430	LCE2C	Q5TA81	110 aa		4.91	□□□□□ -1.62
NIPBL-204	ENST00000504430	ZNF517	Q6ZMY9	492 aa	Predicted RBP	4.91	□□□□□ -1.62
NIPBL-204	ENST00000504430	PRR23B	Q6ZRT6	265 aa		4.91	□□□□□ -1.62
NIPBL-204	ENST00000504430	DOK3	Q7L591	496 aa		4.91	□□□□□ -1.62
NIPBL-204	ENST00000504430	ZNF551	Q7Z340	670 aa	Predicted RBP	4.91	□□□□□ -1.62
NIPBL-204	ENST00000504430	OR1L4	Q8NGR5	311 aa		4.91	□□□□□ -1.62
NIPBL-204	ENST00000504430	COQ8B	Q96D53	544 aa		4.91	□□□□□ -1.62
NIPBL-204	ENST00000504430	DUS3L	Q96G46	650 aa	Known RBP	4.91	□□□□□ -1.62
NIPBL-204	ENST00000504430	CCT8L2	Q96SF2	557 aa		4.91	□□□□□ -1.62
NIPBL-204	ENST00000504430	TRMT61B	Q9BVS5	477 aa	Known RBP	4.91	□□□□□ -1.62
NIPBL-204	ENST00000504430	CCNB1IP1	Q9NPC3	277 aa		4.91	□□□□□ -1.62
NIPBL-204	ENST00000504430	ZNF302	Q9NR11	478 aa		4.91	□□□□□ -1.62
NIPBL-204	ENST00000504430	CDH9	Q9ULB4	789 aa		4.91	□□□□□ -1.62
NIPBL-204	ENST00000504430	NR2E1	Q9Y466	385 aa		4.91	□□□□□ -1.62
NIPBL-204	ENST00000504430	UGDH	O60701	494 aa		4.91	□□□□□ -1.62
NIPBL-204	ENST00000504430	JRK	O75564	520 aa		4.91	□□□□□ -1.62
NIPBL-204	ENST00000504430	ALOX5	P09917	674 aa		4.91	□□□□□ -1.62
NIPBL-204	ENST00000504430	CETP	P11597	493 aa		4.91	□□□□□ -1.62
NIPBL-204	ENST00000504430	GOT1	P17174	413 aa		4.91	□□□□□ -1.62
NIPBL-204	ENST00000504430	HNRNPH1	P31943	449 aa	Known RBP	4.91	□□□□□ -1.62
NIPBL-204	ENST00000504430	EPHX2	P34913	555 aa		4.91	□□□□□ -1.62
NIPBL-204	ENST00000504430	HNRNPH2	P55795	449 aa	Known RBP	4.91	□□□□□ -1.62
NIPBL-204	ENST00000504430	TXNL4A	P83876	142 aa	Known RBP	4.91	□□□□□ -1.62
NIPBL-204	ENST00000504430	CRYZ	Q08257	329 aa	Known RBP	4.91	□□□□□ -1.62
NIPBL-204	ENST00000504430	STXBP2	Q15833	593 aa		4.91	□□□□□ -1.62
NIPBL-204	ENST00000504430	OR2A2	Q6IF42	318 aa		4.91	□□□□□ -1.62
NIPBL-204	ENST00000504430	DPPA4	Q7L190	304 aa		4.91	□□□□□ -1.62
NIPBL-204	ENST00000504430	TFAP2D	Q7Z6R9	452 aa		4.91	□□□□□ -1.62
NIPBL-204	ENST00000504430	KBTBD2	Q8IY47	623 aa		4.91	□□□□□ -1.62
NIPBL-204	ENST00000504430	ZNF786	Q8N393	782 aa		4.91	□□□□□ -1.62
NIPBL-204	ENST00000504430	FGFRL1	Q8N441	504 aa		4.91	□□□□□ -1.62
NIPBL-204	ENST00000504430	LRRC17	Q8N6Y2	441 aa		4.91	□□□□□ -1.62
NIPBL-204	ENST00000504430	KY	Q8NBH2	561 aa		4.91	□□□□□ -1.62
NIPBL-204	ENST00000504430	SRFBP1	Q8NEF9	429 aa	Known RBP	4.91	□□□□□ -1.62
NIPBL-204	ENST00000504430	HM13	Q8TCT9	377 aa		4.91	□□□□□ -1.62
NIPBL-204	ENST00000504430	P3H4	Q92791	437 aa		4.91	□□□□□ -1.62
NIPBL-204	ENST00000504430	LPP	Q93052	612 aa		4.91	□□□□□ -1.62
NIPBL-204	ENST00000504430	PRMT6	Q96LA8	375 aa	Predicted RBP	4.91	□□□□□ -1.62
NIPBL-204	ENST00000504430	FICD	Q9BVA6	458 aa		4.91	□□□□□ -1.62
NIPBL-204	ENST00000504430	NSUN3	Q9H649	340 aa	Known RBP	4.91	□□□□□ -1.62
NIPBL-204	ENST00000504430	SEBOX	Q9HB31	216 aa	Predicted RBP	4.91	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms