RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 COPS7BQ9H9Q2 264 aaPredicted RBP12.55□□□□□ -0.4
PDLIM7-212ENST00000504380 BRF2Q9HAW0 419 aa12.55□□□□□ -0.4
PDLIM7-212ENST00000504380 PSD3Q9NYI0 1048 aa12.55□□□□□ -0.4
PDLIM7-212ENST00000504380 VPS29Q9UBQ0 182 aa12.55□□□□□ -0.4
PDLIM7-212ENST00000504380 GPN3Q9UHW5 284 aaPredicted RBP12.55□□□□□ -0.4
PDLIM7-212ENST00000504380 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.55□□□□□ -0.4
PDLIM7-212ENST00000504380 CCL27Q9Y4X3 112 aa12.55□□□□□ -0.4
PDLIM7-212ENST00000504380 AHCTF1Q8WYP5 2266 aa12.55□□□□□ -0.4
PDLIM7-212ENST00000504380 ATP6AP2A0A1C7CYW4 349 aa12.54□□□□□ -0.4
PDLIM7-212ENST00000504380 ARHGAP10A1A4S6 786 aa12.54□□□□□ -0.4
PDLIM7-212ENST00000504380 SERTM1A2A2V5 107 aa12.54□□□□□ -0.4
PDLIM7-212ENST00000504380 TCP11X1B4DZS4 312 aa12.54□□□□□ -0.4
PDLIM7-212ENST00000504380 C9J4A7 227 aa12.54□□□□□ -0.4
PDLIM7-212ENST00000504380 H0YIG0 161 aa12.54□□□□□ -0.4
PDLIM7-212ENST00000504380 SLC28A1O00337 649 aa12.54□□□□□ -0.4
PDLIM7-212ENST00000504380 TERTO14746 1132 aaKnown RBP12.54□□□□□ -0.4
PDLIM7-212ENST00000504380 B3GALT2O43825 422 aa12.54□□□□□ -0.4
PDLIM7-212ENST00000504380 TMPRSS11DO60235 418 aa12.54□□□□□ -0.4
PDLIM7-212ENST00000504380 ATP6AP2O75787 350 aa12.54□□□□□ -0.4
PDLIM7-212ENST00000504380 ONECUT2O95948 504 aa12.54□□□□□ -0.4
PDLIM7-212ENST00000504380 KLK1P06870 262 aa12.54□□□□□ -0.4
PDLIM7-212ENST00000504380 EIF2S3P41091 472 aaKnown RBP12.54□□□□□ -0.4
PDLIM7-212ENST00000504380 MTTPP55157 894 aa12.54□□□□□ -0.4
PDLIM7-212ENST00000504380 TGM3Q08188 693 aa12.54□□□□□ -0.4
PDLIM7-212ENST00000504380 SLAMF1Q13291 335 aa12.54□□□□□ -0.4
PDLIM7-212ENST00000504380 DSG2Q14126 1118 aa12.54□□□□□ -0.4
PDLIM7-212ENST00000504380 Q6ZSR9 355 aa12.54□□□□□ -0.4
PDLIM7-212ENST00000504380 COMMD6Q7Z4G1 85 aa12.54□□□□□ -0.4
PDLIM7-212ENST00000504380 TRIM46Q7Z4K8 759 aa12.54□□□□□ -0.4
PDLIM7-212ENST00000504380 LAPTM4BQ86VI4 370 aa12.54□□□□□ -0.4
PDLIM7-212ENST00000504380 METTL4Q8N3J2 472 aa12.54□□□□□ -0.4
PDLIM7-212ENST00000504380 GBP7Q8N8V2 638 aaPredicted RBP12.54□□□□□ -0.4
PDLIM7-212ENST00000504380 ZNF248Q8NDW4 579 aa12.54□□□□□ -0.4
PDLIM7-212ENST00000504380 SNIP1Q8TAD8 396 aaKnown RBP12.54□□□□□ -0.4
PDLIM7-212ENST00000504380 CHTF18Q8WVB6 975 aa12.54□□□□□ -0.4
PDLIM7-212ENST00000504380 UCN3Q969E3 161 aa12.54□□□□□ -0.4
PDLIM7-212ENST00000504380 MVB12AQ96EY5 273 aa12.54□□□□□ -0.4
PDLIM7-212ENST00000504380 THOC1Q96FV9 657 aaKnown RBP12.54□□□□□ -0.4
PDLIM7-212ENST00000504380 SERINC2Q96SA4 455 aa12.54□□□□□ -0.4
PDLIM7-212ENST00000504380 MAPKAP1Q9BPZ7 522 aa12.54□□□□□ -0.4
PDLIM7-212ENST00000504380 CENPKQ9BS16 269 aa12.54□□□□□ -0.4
PDLIM7-212ENST00000504380 EBPLQ9BY08 206 aa12.54□□□□□ -0.4
PDLIM7-212ENST00000504380 NUF2Q9BZD4 464 aa12.54□□□□□ -0.4
PDLIM7-212ENST00000504380 DKK4Q9UBT3 224 aa12.54□□□□□ -0.4
PDLIM7-212ENST00000504380 HAO1Q9UJM8 370 aa12.54□□□□□ -0.4
PDLIM7-212ENST00000504380 FBXW2Q9UKT8 454 aa12.54□□□□□ -0.4
PDLIM7-212ENST00000504380 PPT2Q9UMR5 302 aa12.54□□□□□ -0.4
PDLIM7-212ENST00000504380 FARSAQ9Y285 508 aaKnown RBP12.54□□□□□ -0.4
PDLIM7-212ENST00000504380 NBEAQ8NFP9 2946 aa12.53□□□□□ -0.4
PDLIM7-212ENST00000504380 A0A0A6YYD5 115 aa12.53□□□□□ -0.4
PDLIM7-212ENST00000504380 PEX11AO75192 247 aa12.53□□□□□ -0.4
PDLIM7-212ENST00000504380 PRKRAO75569 313 aaKnown RBP12.53□□□□□ -0.4
PDLIM7-212ENST00000504380 CDC123O75794 336 aaPredicted RBP12.53□□□□□ -0.4
PDLIM7-212ENST00000504380 PIM1P11309 404 aaPredicted RBP12.53□□□□□ -0.4
PDLIM7-212ENST00000504380 HSD3B1P14060 373 aa12.53□□□□□ -0.4
PDLIM7-212ENST00000504380 HIST1H1TP22492 207 aaPredicted RBP12.53□□□□□ -0.4
PDLIM7-212ENST00000504380 HSD3B2P26439 372 aa12.53□□□□□ -0.4
PDLIM7-212ENST00000504380 TPP2P29144 1249 aaPredicted RBP12.53□□□□□ -0.4
PDLIM7-212ENST00000504380 MDH1P40925 334 aaKnown RBP12.53□□□□□ -0.4
PDLIM7-212ENST00000504380 XCR1P46094 333 aa12.53□□□□□ -0.4
PDLIM7-212ENST00000504380 EFNA3P52797 238 aa12.53□□□□□ -0.4
PDLIM7-212ENST00000504380 LIM2P55344 173 aa12.53□□□□□ -0.4
PDLIM7-212ENST00000504380 RAE1P78406 368 aaKnown RBP12.53□□□□□ -0.4
PDLIM7-212ENST00000504380 NCF4Q15080 339 aa12.53□□□□□ -0.4
PDLIM7-212ENST00000504380 NR6A1Q15406 480 aa12.53□□□□□ -0.4
PDLIM7-212ENST00000504380 NKG7Q16617 165 aa12.53□□□□□ -0.4
PDLIM7-212ENST00000504380 GALNTL6Q49A17 601 aa12.53□□□□□ -0.4
PDLIM7-212ENST00000504380 C10orf62Q5T681 223 aaPredicted RBP12.53□□□□□ -0.4
PDLIM7-212ENST00000504380 VWA5B1Q5TIE3 1220 aa12.53□□□□□ -0.4
PDLIM7-212ENST00000504380 MRPL14Q6P1L8 145 aaKnown RBP12.53□□□□□ -0.4
PDLIM7-212ENST00000504380 WDR75Q8IWA0 830 aaKnown RBP12.53□□□□□ -0.4
PDLIM7-212ENST00000504380 ZC3H7AQ8IWR0 971 aaKnown RBP12.53□□□□□ -0.4
PDLIM7-212ENST00000504380 FAM47BQ8NA70 645 aa12.53□□□□□ -0.4
PDLIM7-212ENST00000504380 SRFBP1Q8NEF9 429 aaKnown RBP12.53□□□□□ -0.4
PDLIM7-212ENST00000504380 STT3BQ8TCJ2 826 aa12.53□□□□□ -0.4
PDLIM7-212ENST00000504380 CSF3RQ99062 836 aa12.53□□□□□ -0.4
PDLIM7-212ENST00000504380 DPH2Q9BQC3 489 aaPredicted RBP12.53□□□□□ -0.4
PDLIM7-212ENST00000504380 MESP1Q9BRJ9 268 aa12.53□□□□□ -0.4
PDLIM7-212ENST00000504380 GPN2Q9H9Y4 310 aaPredicted RBP12.53□□□□□ -0.4
PDLIM7-212ENST00000504380 ZNF282Q9UDV7 671 aaPredicted RBP12.53□□□□□ -0.4
PDLIM7-212ENST00000504380 PTRH2Q9Y3E5 179 aaKnown RBP12.53□□□□□ -0.4
PDLIM7-212ENST00000504380 MAP4K5Q9Y4K4 846 aa12.53□□□□□ -0.4
PDLIM7-212ENST00000504380 FLNBO75369 2602 aaKnown RBP12.52□□□□□ -0.4
PDLIM7-212ENST00000504380 GCN1Q92616 2671 aaKnown RBP12.52□□□□□ -0.41
PDLIM7-212ENST00000504380 FREM2Q5SZK8 3169 aa12.52□□□□□ -0.41
PDLIM7-212ENST00000504380 MYOCOSA0A1B0GUC4 107 aa12.52□□□□□ -0.41
PDLIM7-212ENST00000504380 WASHC1A8K0Z3 465 aa12.52□□□□□ -0.41
PDLIM7-212ENST00000504380 POLR3GO15318 223 aaPredicted RBP12.52□□□□□ -0.41
PDLIM7-212ENST00000504380 EFSO43281 561 aa12.52□□□□□ -0.41
PDLIM7-212ENST00000504380 RGS14O43566 566 aa12.52□□□□□ -0.41
PDLIM7-212ENST00000504380 B4GALT2O60909 372 aa12.52□□□□□ -0.41
PDLIM7-212ENST00000504380 SEC22BO75396 215 aa12.52□□□□□ -0.41
PDLIM7-212ENST00000504380 SEMA3DO95025 777 aa12.52□□□□□ -0.41
PDLIM7-212ENST00000504380 ZGLP1P0C6A0 271 aa12.52□□□□□ -0.41
PDLIM7-212ENST00000504380 ITPKBP27987 946 aa12.52□□□□□ -0.41
PDLIM7-212ENST00000504380 HNRNPFP52597 415 aaKnown RBP12.52□□□□□ -0.41
PDLIM7-212ENST00000504380 HNRNPH2P55795 449 aaKnown RBP12.52□□□□□ -0.41
PDLIM7-212ENST00000504380 RPS15P62841 145 aaKnown RBP12.52□□□□□ -0.41
PDLIM7-212ENST00000504380 OCA2Q04671 838 aa12.52□□□□□ -0.41
PDLIM7-212ENST00000504380 ZNF33BQ06732 778 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms