RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 CD46P15529 392 aa15.19■□□□□ 0.02
SCLT1-204ENST00000503215 CERS1P27544 350 aa15.19■□□□□ 0.02
SCLT1-204ENST00000503215 PER3P56645 1201 aa15.19■□□□□ 0.02
SCLT1-204ENST00000503215 ATP6V0D1P61421 351 aa15.19■□□□□ 0.02
SCLT1-204ENST00000503215 GUCY2DQ02846 1103 aa15.19■□□□□ 0.02
SCLT1-204ENST00000503215 MAPKAPK3Q16644 382 aa15.19■□□□□ 0.02
SCLT1-204ENST00000503215 PDK4Q16654 411 aa15.19■□□□□ 0.02
SCLT1-204ENST00000503215 ADPRMQ3LIE5 342 aa15.19■□□□□ 0.02
SCLT1-204ENST00000503215 GRTP1Q5TC63 336 aa15.19■□□□□ 0.02
SCLT1-204ENST00000503215 C16orf47Q6ZP98 133 aaPredicted RBP15.19■□□□□ 0.02
SCLT1-204ENST00000503215 CLNKQ7Z7G1 428 aa15.19■□□□□ 0.02
SCLT1-204ENST00000503215 KRT78Q8N1N4 520 aa15.19■□□□□ 0.02
SCLT1-204ENST00000503215 TCAIMQ8N3R3 496 aa15.19■□□□□ 0.02
SCLT1-204ENST00000503215 FAM47BQ8NA70 645 aa15.19■□□□□ 0.02
SCLT1-204ENST00000503215 APCDD1LQ8NCL9 501 aa15.19■□□□□ 0.02
SCLT1-204ENST00000503215 PDPRQ8NCN5 879 aa15.19■□□□□ 0.02
SCLT1-204ENST00000503215 WDR34Q96EX3 536 aa15.19■□□□□ 0.02
SCLT1-204ENST00000503215 FAR2Q96K12 515 aa15.19■□□□□ 0.02
SCLT1-204ENST00000503215 FRMD6Q96NE9 622 aa15.19■□□□□ 0.02
SCLT1-204ENST00000503215 REXO4Q9GZR2 422 aaKnown RBP15.19■□□□□ 0.02
SCLT1-204ENST00000503215 PRDM7Q9NQW5 492 aa15.19■□□□□ 0.02
SCLT1-204ENST00000503215 PNO1Q9NRX1 252 aaKnown RBP15.19■□□□□ 0.02
SCLT1-204ENST00000503215 RNF112Q9ULX5 631 aa15.19■□□□□ 0.02
SCLT1-204ENST00000503215 NPIPA1Q9UND3 350 aa15.19■□□□□ 0.02
SCLT1-204ENST00000503215 UTP11Q9Y3A2 253 aaKnown RBP15.19■□□□□ 0.02
SCLT1-204ENST00000503215 PCDHGB6Q9Y5F9 930 aa15.19■□□□□ 0.02
SCLT1-204ENST00000503215 ASPDHA6ND91 283 aa15.18■□□□□ 0.02
SCLT1-204ENST00000503215 ANKDD1BA6NHY2 528 aa15.18■□□□□ 0.02
SCLT1-204ENST00000503215 UBXN8O00124 270 aa15.18■□□□□ 0.02
SCLT1-204ENST00000503215 CCL21O00585 134 aa15.18■□□□□ 0.02
SCLT1-204ENST00000503215 CYR61O00622 381 aa15.18■□□□□ 0.02
SCLT1-204ENST00000503215 CLGNO14967 610 aa15.18■□□□□ 0.02
SCLT1-204ENST00000503215 PRKNO60260 465 aaPredicted RBP15.18■□□□□ 0.02
SCLT1-204ENST00000503215 CCNT2O60583 730 aaKnown RBP15.18■□□□□ 0.02
SCLT1-204ENST00000503215 GSTA2P09210 222 aa15.18■□□□□ 0.02
SCLT1-204ENST00000503215 TFEBP19484 476 aa15.18■□□□□ 0.02
SCLT1-204ENST00000503215 EEF1DP29692 281 aaKnown RBP15.18■□□□□ 0.02
SCLT1-204ENST00000503215 SPRP35270 261 aaPredicted RBP15.18■□□□□ 0.02
SCLT1-204ENST00000503215 RAB38P57729 211 aa15.18■□□□□ 0.02
SCLT1-204ENST00000503215 CHIT1Q13231 466 aa15.18■□□□□ 0.02
SCLT1-204ENST00000503215 SLMAPQ14BN4 828 aa15.18■□□□□ 0.02
SCLT1-204ENST00000503215 C3AR1Q16581 482 aa15.18■□□□□ 0.02
SCLT1-204ENST00000503215 CDKL4Q5MAI5 379 aa15.18■□□□□ 0.02
SCLT1-204ENST00000503215 SLC25A25Q6KCM7 469 aa15.18■□□□□ 0.02
SCLT1-204ENST00000503215 ABHD17CQ6PCB6 329 aa15.18■□□□□ 0.02
SCLT1-204ENST00000503215 SIAH3Q8IW03 269 aa15.18■□□□□ 0.02
SCLT1-204ENST00000503215 LGI4Q8N135 537 aa15.18■□□□□ 0.02
SCLT1-204ENST00000503215 TTLQ8NG68 377 aa15.18■□□□□ 0.02
SCLT1-204ENST00000503215 OR2L5Q8NG80 312 aa15.18■□□□□ 0.02
SCLT1-204ENST00000503215 ITLN2Q8WWU7 325 aaPredicted RBP15.18■□□□□ 0.02
SCLT1-204ENST00000503215 NXNL1Q96CM4 212 aa15.18■□□□□ 0.02
SCLT1-204ENST00000503215 MRRFQ96E11 262 aaKnown RBP15.18■□□□□ 0.02
SCLT1-204ENST00000503215 CCDC120Q96HB5 630 aa15.18■□□□□ 0.02
SCLT1-204ENST00000503215 CAPS2Q9BXY5 557 aa15.18■□□□□ 0.02
SCLT1-204ENST00000503215 EHD1Q9H4M9 534 aa15.18■□□□□ 0.02
SCLT1-204ENST00000503215 CNOT10Q9H9A5 744 aaKnown RBP15.18■□□□□ 0.02
SCLT1-204ENST00000503215 LIN28AQ9H9Z2 209 aaKnown RBP15.18■□□□□ 0.02
SCLT1-204ENST00000503215 PRTFDC1Q9NRG1 225 aa15.18■□□□□ 0.02
SCLT1-204ENST00000503215 MMACHCQ9Y4U1 282 aa15.18■□□□□ 0.02
SCLT1-204ENST00000503215 TRBV11-1A0A0K0K1C0 115 aa15.17■□□□□ 0.02
SCLT1-204ENST00000503215 HMX2A2RU54 273 aa15.17■□□□□ 0.02
SCLT1-204ENST00000503215 RTCAO00442 366 aaKnown RBP15.17■□□□□ 0.02
SCLT1-204ENST00000503215 B3GALT2O43825 422 aa15.17■□□□□ 0.02
SCLT1-204ENST00000503215 SLC25A12O75746 678 aa15.17■□□□□ 0.02
SCLT1-204ENST00000503215 GRNP28799 593 aaKnown RBP15.17■□□□□ 0.02
SCLT1-204ENST00000503215 CA7P43166 264 aa15.17■□□□□ 0.02
SCLT1-204ENST00000503215 GPR143P51810 404 aa15.17■□□□□ 0.02
SCLT1-204ENST00000503215 LIM2P55344 173 aa15.17■□□□□ 0.02
SCLT1-204ENST00000503215 HSF1Q00613 529 aa15.17■□□□□ 0.02
SCLT1-204ENST00000503215 IRF9Q00978 393 aa15.17■□□□□ 0.02
SCLT1-204ENST00000503215 ALDH6A1Q02252 535 aaKnown RBP15.17■□□□□ 0.02
SCLT1-204ENST00000503215 SLC13A2Q13183 592 aa15.17■□□□□ 0.02
SCLT1-204ENST00000503215 BMPR2Q13873 1038 aa15.17■□□□□ 0.02
SCLT1-204ENST00000503215 ZNF793Q6ZN11 406 aa15.17■□□□□ 0.02
SCLT1-204ENST00000503215 RAPH1Q70E73 1250 aa15.17■□□□□ 0.02
SCLT1-204ENST00000503215 RNF175Q8N4F7 328 aa15.17■□□□□ 0.02
SCLT1-204ENST00000503215 CPSF7Q8N684 471 aaKnown RBP15.17■□□□□ 0.02
SCLT1-204ENST00000503215 ARMC2Q8NEN0 867 aa15.17■□□□□ 0.02
SCLT1-204ENST00000503215 B3GNT7Q8NFL0 401 aa15.17■□□□□ 0.02
SCLT1-204ENST00000503215 PTCD3Q96EY7 689 aaKnown RBP15.17■□□□□ 0.02
SCLT1-204ENST00000503215 GPR137Q96N19 417 aa15.17■□□□□ 0.02
SCLT1-204ENST00000503215 ATOH8Q96SQ7 321 aa15.17■□□□□ 0.02
SCLT1-204ENST00000503215 NPLQ9BXD5 320 aaPredicted RBP15.17■□□□□ 0.02
SCLT1-204ENST00000503215 DEFB126Q9BYW3 111 aa15.17■□□□□ 0.02
SCLT1-204ENST00000503215 CD244Q9BZW8 370 aa15.17■□□□□ 0.02
SCLT1-204ENST00000503215 KCMF1Q9P0J7 381 aa15.17■□□□□ 0.02
SCLT1-204ENST00000503215 TINAGQ9UJW2 476 aa15.17■□□□□ 0.02
SCLT1-204ENST00000503215 CREBBPQ92793 2442 aa15.17■□□□□ 0.02
SCLT1-204ENST00000503215 SLC19A2O60779 497 aa15.16■□□□□ 0.02
SCLT1-204ENST00000503215 MTHFD2P13995 350 aa15.16■□□□□ 0.02
SCLT1-204ENST00000503215 PRF1P14222 555 aa15.16■□□□□ 0.02
SCLT1-204ENST00000503215 CYB561P49447 251 aa15.16■□□□□ 0.02
SCLT1-204ENST00000503215 HLCSP50747 726 aa15.16■□□□□ 0.02
SCLT1-204ENST00000503215 IRF8Q02556 426 aa15.16■□□□□ 0.02
SCLT1-204ENST00000503215 ILF2Q12905 390 aaKnown RBP15.16■□□□□ 0.02
SCLT1-204ENST00000503215 SP5Q6BEB4 398 aaPredicted RBP15.16■□□□□ 0.02
SCLT1-204ENST00000503215 NCCRP1Q6ZVX7 275 aaPredicted RBP15.16■□□□□ 0.02
SCLT1-204ENST00000503215 ZNF572Q7Z3I7 529 aaPredicted RBP15.16■□□□□ 0.02
SCLT1-204ENST00000503215 CHERPQ8IWX8 916 aaKnown RBP15.16■□□□□ 0.02
SCLT1-204ENST00000503215 ARMC10Q8N2F6 343 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms