RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 ACRV1P26436 265 aa4.86□□□□□ -1.63
FXN-205ENST00000498653 TEAD1P28347 426 aa4.86□□□□□ -1.63
FXN-205ENST00000498653 AKT1P31749 480 aa4.86□□□□□ -1.63
FXN-205ENST00000498653 PTGER1P34995 402 aa4.86□□□□□ -1.63
FXN-205ENST00000498653 MSH2P43246 934 aa4.86□□□□□ -1.63
FXN-205ENST00000498653 GNPDA1P46926 289 aa4.86□□□□□ -1.63
FXN-205ENST00000498653 ZFP36L2P47974 494 aaKnown RBP4.86□□□□□ -1.63
FXN-205ENST00000498653 TTPAP49638 278 aa4.86□□□□□ -1.63
FXN-205ENST00000498653 CDKN1CP49918 316 aaPredicted RBP4.86□□□□□ -1.63
FXN-205ENST00000498653 CSE1LP55060 971 aaKnown RBP4.86□□□□□ -1.63
FXN-205ENST00000498653 EIF3BP55884 814 aaKnown RBP4.86□□□□□ -1.63
FXN-205ENST00000498653 ATP5J2P56134 94 aa4.86□□□□□ -1.63
FXN-205ENST00000498653 VLDLRP98155 873 aa4.86□□□□□ -1.63
FXN-205ENST00000498653 ACY1Q03154 408 aa4.86□□□□□ -1.63
FXN-205ENST00000498653 IFFO1Q0D2I5 559 aa4.86□□□□□ -1.63
FXN-205ENST00000498653 ILF2Q12905 390 aaKnown RBP4.86□□□□□ -1.63
FXN-205ENST00000498653 GTF2H3Q13889 308 aa4.86□□□□□ -1.63
FXN-205ENST00000498653 SLC29A2Q14542 456 aa4.86□□□□□ -1.63
FXN-205ENST00000498653 GPR19Q15760 415 aa4.86□□□□□ -1.63
FXN-205ENST00000498653 UAP1Q16222 522 aaPredicted RBP4.86□□□□□ -1.63
FXN-205ENST00000498653 KBTBD12Q3ZCT8 623 aa4.86□□□□□ -1.63
FXN-205ENST00000498653 ATP13A5Q4VNC0 1218 aa4.86□□□□□ -1.63
FXN-205ENST00000498653 ZNF789Q5FWF6 425 aa4.86□□□□□ -1.63
FXN-205ENST00000498653 LDLRAP1Q5SW96 308 aa4.86□□□□□ -1.63
FXN-205ENST00000498653 SFRP5Q5T4F7 317 aa4.86□□□□□ -1.63
FXN-205ENST00000498653 TEDDM1Q5T9Z0 273 aa4.86□□□□□ -1.63
FXN-205ENST00000498653 RNF187Q5TA31 235 aaPredicted RBP4.86□□□□□ -1.63
FXN-205ENST00000498653 GARNL3Q5VVW2 1013 aa4.86□□□□□ -1.63
FXN-205ENST00000498653 ZNF470Q6ECI4 717 aa4.86□□□□□ -1.63
FXN-205ENST00000498653 FBXO38Q6PIJ6 1188 aa4.86□□□□□ -1.63
FXN-205ENST00000498653 FAM92BQ6ZTR7 304 aa4.86□□□□□ -1.63
FXN-205ENST00000498653 KIAA0408Q6ZU52 694 aa4.86□□□□□ -1.63
FXN-205ENST00000498653 MICALCLQ6ZW33 695 aa4.86□□□□□ -1.63
FXN-205ENST00000498653 MARK2Q7KZI7 788 aaKnown RBP4.86□□□□□ -1.63
FXN-205ENST00000498653 WDR53Q7Z5U6 358 aaPredicted RBP4.86□□□□□ -1.63
FXN-205ENST00000498653 SLC26A11Q86WA9 606 aa4.86□□□□□ -1.63
FXN-205ENST00000498653 SERPINA9Q86WD7 417 aa4.86□□□□□ -1.63
FXN-205ENST00000498653 CILP2Q8IUL8 1156 aa4.86□□□□□ -1.63
FXN-205ENST00000498653 PHYKPLQ8IUZ5 450 aa4.86□□□□□ -1.63
FXN-205ENST00000498653 LINC01560Q8TB33 94 aa4.86□□□□□ -1.63
FXN-205ENST00000498653 FAM216AQ8WUB2 273 aa4.86□□□□□ -1.63
FXN-205ENST00000498653 HEXDCQ8WVB3 486 aa4.86□□□□□ -1.63
FXN-205ENST00000498653 GLYATL1Q969I3 302 aa4.86□□□□□ -1.63
FXN-205ENST00000498653 DCUN1D1Q96GG9 259 aa4.86□□□□□ -1.63
FXN-205ENST00000498653 VPS35Q96QK1 796 aa4.86□□□□□ -1.63
FXN-205ENST00000498653 COPS8Q99627 209 aa4.86□□□□□ -1.63
FXN-205ENST00000498653 CPNE1Q99829 537 aa4.86□□□□□ -1.63
FXN-205ENST00000498653 DPH2Q9BQC3 489 aaPredicted RBP4.86□□□□□ -1.63
FXN-205ENST00000498653 TP63Q9H3D4 680 aaPredicted RBP4.86□□□□□ -1.63
FXN-205ENST00000498653 ACBD3Q9H3P7 528 aa4.86□□□□□ -1.63
FXN-205ENST00000498653 WDR26Q9H7D7 661 aa4.86□□□□□ -1.63
FXN-205ENST00000498653 RMI1Q9H9A7 625 aa4.86□□□□□ -1.63
FXN-205ENST00000498653 PPCSQ9HAB8 311 aa4.86□□□□□ -1.63
FXN-205ENST00000498653 UBTD1Q9HAC8 227 aa4.86□□□□□ -1.63
FXN-205ENST00000498653 PHPT1Q9NRX4 125 aaPredicted RBP4.86□□□□□ -1.63
FXN-205ENST00000498653 INTS10Q9NVR2 710 aaKnown RBP4.86□□□□□ -1.63
FXN-205ENST00000498653 SMOXQ9NWM0 555 aa4.86□□□□□ -1.63
FXN-205ENST00000498653 IL1RAPL1Q9NZN1 696 aa4.86□□□□□ -1.63
FXN-205ENST00000498653 VPS18Q9P253 973 aa4.86□□□□□ -1.63
FXN-205ENST00000498653 MARCH4Q9P2E8 410 aaPredicted RBP4.86□□□□□ -1.63
FXN-205ENST00000498653 TXNDC16Q9P2K2 825 aa4.86□□□□□ -1.63
FXN-205ENST00000498653 GNPTGQ9UJJ9 305 aa4.86□□□□□ -1.63
FXN-205ENST00000498653 FBXO5Q9UKT4 447 aa4.86□□□□□ -1.63
FXN-205ENST00000498653 SUFUQ9UMX1 484 aa4.86□□□□□ -1.63
FXN-205ENST00000498653 IKBKGQ9Y6K9 419 aa4.86□□□□□ -1.63
FXN-205ENST00000498653 UBA6A0AVT1 1052 aaPredicted RBP4.85□□□□□ -1.63
FXN-205ENST00000498653 AGAP14A8MT82 685 aa4.85□□□□□ -1.63
FXN-205ENST00000498653 CXorf49A8MYA2 514 aaPredicted RBP4.85□□□□□ -1.63
FXN-205ENST00000498653 C9J4A7 227 aa4.85□□□□□ -1.63
FXN-205ENST00000498653 F8W8V4 182 aa4.85□□□□□ -1.63
FXN-205ENST00000498653 DYNC1I1O14576 645 aa4.85□□□□□ -1.63
FXN-205ENST00000498653 VEGFDO43915 354 aa4.85□□□□□ -1.63
FXN-205ENST00000498653 SLITRK5O94991 958 aa4.85□□□□□ -1.63
FXN-205ENST00000498653 ASMTLO95671 621 aa4.85□□□□□ -1.63
FXN-205ENST00000498653 ONECUT2O95948 504 aa4.85□□□□□ -1.63
FXN-205ENST00000498653 SOD1P00441 154 aa4.85□□□□□ -1.63
FXN-205ENST00000498653 SHBGP04278 402 aa4.85□□□□□ -1.63
FXN-205ENST00000498653 INHBAP08476 426 aa4.85□□□□□ -1.63
FXN-205ENST00000498653 NUDT17P0C025 328 aa4.85□□□□□ -1.63
FXN-205ENST00000498653 PRSS56P0CW18 603 aa4.85□□□□□ -1.63
FXN-205ENST00000498653 MYCLP1P12525 358 aaPredicted RBP4.85□□□□□ -1.63
FXN-205ENST00000498653 ZNF7P17097 686 aaPredicted RBP4.85□□□□□ -1.63
FXN-205ENST00000498653 SPRP35270 261 aaPredicted RBP4.85□□□□□ -1.63
FXN-205ENST00000498653 PTGS2P35354 604 aa4.85□□□□□ -1.63
FXN-205ENST00000498653 TRIM23P36406 574 aa4.85□□□□□ -1.63
FXN-205ENST00000498653 GP5P40197 560 aa4.85□□□□□ -1.63
FXN-205ENST00000498653 SLC1A2P43004 574 aa4.85□□□□□ -1.63
FXN-205ENST00000498653 CAPZBP47756 277 aa4.85□□□□□ -1.63
FXN-205ENST00000498653 CD151P48509 253 aa4.85□□□□□ -1.63
FXN-205ENST00000498653 SERPINB9P50453 376 aa4.85□□□□□ -1.63
FXN-205ENST00000498653 MPP1Q00013 466 aa4.85□□□□□ -1.63
FXN-205ENST00000498653 CDK3Q00526 305 aa4.85□□□□□ -1.63
FXN-205ENST00000498653 CLCQ05315 142 aa4.85□□□□□ -1.63
FXN-205ENST00000498653 CTBP1Q13363 440 aa4.85□□□□□ -1.63
FXN-205ENST00000498653 LRP8Q14114 963 aa4.85□□□□□ -1.63
FXN-205ENST00000498653 SEMA3AQ14563 771 aa4.85□□□□□ -1.63
FXN-205ENST00000498653 ITIH4Q14624 930 aa4.85□□□□□ -1.63
FXN-205ENST00000498653 CASP8Q14790 479 aa4.85□□□□□ -1.63
FXN-205ENST00000498653 EFTUD2Q15029 972 aaKnown RBP eCLIP4.85□□□□□ -1.63
FXN-205ENST00000498653 TYSND1Q2T9J0 566 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms