RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 CYP4X1Q8N118 509 aa12.04□□□□□ -0.48
HSPG2-213ENST00000498495 ARMC2Q8NEN0 867 aa12.04□□□□□ -0.48
HSPG2-213ENST00000498495 OR52B6Q8NGF0 335 aa12.04□□□□□ -0.48
HSPG2-213ENST00000498495 BRIX1Q8TDN6 353 aaKnown RBP12.04□□□□□ -0.48
HSPG2-213ENST00000498495 ADAMTS18Q8TE60 1221 aa12.04□□□□□ -0.48
HSPG2-213ENST00000498495 EPS8L3Q8TE67 593 aaKnown RBP12.04□□□□□ -0.48
HSPG2-213ENST00000498495 TSLPQ969D9 159 aa12.04□□□□□ -0.48
HSPG2-213ENST00000498495 RGMAQ96B86 450 aa12.04□□□□□ -0.48
HSPG2-213ENST00000498495 MTFMTQ96DP5 389 aaKnown RBP12.04□□□□□ -0.48
HSPG2-213ENST00000498495 NSUN5Q96P11 429 aaKnown RBP12.04□□□□□ -0.48
HSPG2-213ENST00000498495 LMF1Q96S06 567 aa12.04□□□□□ -0.48
HSPG2-213ENST00000498495 MTERF1Q99551 399 aaKnown RBP12.04□□□□□ -0.48
HSPG2-213ENST00000498495 LPAR4Q99677 370 aa12.04□□□□□ -0.48
HSPG2-213ENST00000498495 EPN3Q9H201 632 aa12.04□□□□□ -0.48
HSPG2-213ENST00000498495 EPS8L2Q9H6S3 715 aa12.04□□□□□ -0.48
HSPG2-213ENST00000498495 ZBTB20Q9HC78 741 aaPredicted RBP12.04□□□□□ -0.48
HSPG2-213ENST00000498495 ZBTB26Q9HCK0 441 aa12.04□□□□□ -0.48
HSPG2-213ENST00000498495 SLAMF7Q9NQ25 335 aa12.04□□□□□ -0.48
HSPG2-213ENST00000498495 PRDM9Q9NQV7 894 aa12.04□□□□□ -0.48
HSPG2-213ENST00000498495 PRTFDC1Q9NRG1 225 aa12.04□□□□□ -0.48
HSPG2-213ENST00000498495 PTGFRNQ9P2B2 879 aa12.04□□□□□ -0.48
HSPG2-213ENST00000498495 DAPP1Q9UN19 280 aa12.04□□□□□ -0.48
HSPG2-213ENST00000498495 MRPS33Q9Y291 106 aaKnown RBP12.04□□□□□ -0.48
HSPG2-213ENST00000498495 COL6A6A6NMZ7 2263 aa12.04□□□□□ -0.48
HSPG2-213ENST00000498495 PIEZO2Q9H5I5 2752 aa12.03□□□□□ -0.48
HSPG2-213ENST00000498495 FOXO6A8MYZ6 492 aa12.03□□□□□ -0.48
HSPG2-213ENST00000498495 RTCAO00442 366 aaKnown RBP12.03□□□□□ -0.48
HSPG2-213ENST00000498495 DLX3O60479 287 aa12.03□□□□□ -0.48
HSPG2-213ENST00000498495 GLRA3O75311 464 aa12.03□□□□□ -0.48
HSPG2-213ENST00000498495 CELA2AP08217 269 aa12.03□□□□□ -0.48
HSPG2-213ENST00000498495 RPS17P08708 135 aaKnown RBP12.03□□□□□ -0.48
HSPG2-213ENST00000498495 IMPDH1P20839 514 aa12.03□□□□□ -0.48
HSPG2-213ENST00000498495 ATP5F1P24539 256 aaPredicted RBP12.03□□□□□ -0.48
HSPG2-213ENST00000498495 CERS1P27544 350 aa12.03□□□□□ -0.48
HSPG2-213ENST00000498495 NEK2P51955 445 aa12.03□□□□□ -0.48
HSPG2-213ENST00000498495 RAP1GDS1P52306 607 aa12.03□□□□□ -0.48
HSPG2-213ENST00000498495 LIM2P55344 173 aa12.03□□□□□ -0.48
HSPG2-213ENST00000498495 IFFO1Q0D2I5 559 aa12.03□□□□□ -0.48
HSPG2-213ENST00000498495 EXT1Q16394 746 aa12.03□□□□□ -0.48
HSPG2-213ENST00000498495 CRB2Q5IJ48 1285 aa12.03□□□□□ -0.48
HSPG2-213ENST00000498495 OR4C11Q6IEV9 310 aa12.03□□□□□ -0.48
HSPG2-213ENST00000498495 PAPD4Q6PIY7 484 aaKnown RBP12.03□□□□□ -0.48
HSPG2-213ENST00000498495 LINC00696Q6ZRV3 163 aa12.03□□□□□ -0.48
HSPG2-213ENST00000498495 UBE3DQ7Z6J8 389 aa12.03□□□□□ -0.48
HSPG2-213ENST00000498495 SLC22A9Q8IVM8 553 aa12.03□□□□□ -0.48
HSPG2-213ENST00000498495 RNF175Q8N4F7 328 aa12.03□□□□□ -0.48
HSPG2-213ENST00000498495 SIRT6Q8N6T7 355 aa12.03□□□□□ -0.48
HSPG2-213ENST00000498495 ACOT4Q8N9L9 421 aa12.03□□□□□ -0.48
HSPG2-213ENST00000498495 OR4F6Q8NGB9 312 aa12.03□□□□□ -0.48
HSPG2-213ENST00000498495 DNAJB14Q8TBM8 379 aa12.03□□□□□ -0.48
HSPG2-213ENST00000498495 WDR20Q8TBZ3 569 aa12.03□□□□□ -0.48
HSPG2-213ENST00000498495 AENQ8WTP8 325 aaKnown RBP12.03□□□□□ -0.48
HSPG2-213ENST00000498495 PSMF1Q92530 271 aa12.03□□□□□ -0.48
HSPG2-213ENST00000498495 PNPLA2Q96AD5 504 aa12.03□□□□□ -0.48
HSPG2-213ENST00000498495 MAGEB10Q96LZ2 347 aaPredicted RBP12.03□□□□□ -0.48
HSPG2-213ENST00000498495 C1QTNF3Q9BXJ4 246 aa12.03□□□□□ -0.48
HSPG2-213ENST00000498495 PARD6BQ9BYG5 372 aa12.03□□□□□ -0.48
HSPG2-213ENST00000498495 TRIM4Q9C037 500 aa12.03□□□□□ -0.48
HSPG2-213ENST00000498495 DMRT3Q9NQL9 472 aa12.03□□□□□ -0.48
HSPG2-213ENST00000498495 PSD3Q9NYI0 1048 aa12.03□□□□□ -0.48
HSPG2-213ENST00000498495 GRID1Q9ULK0 1009 aa12.03□□□□□ -0.48
HSPG2-213ENST00000498495 MMACHCQ9Y4U1 282 aa12.03□□□□□ -0.48
HSPG2-213ENST00000498495 SPACA6W5XKT8 324 aa12.03□□□□□ -0.48
HSPG2-213ENST00000498495 ATRXP46100 2492 aa12.03□□□□□ -0.48
HSPG2-213ENST00000498495 A8MUA0 341 aa12.02□□□□□ -0.49
HSPG2-213ENST00000498495 A8MUI8 341 aa12.02□□□□□ -0.49
HSPG2-213ENST00000498495 FOXE1O00358 373 aaPredicted RBP12.02□□□□□ -0.49
HSPG2-213ENST00000498495 OTCP00480 354 aa12.02□□□□□ -0.49
HSPG2-213ENST00000498495 NUDT17P0C025 328 aa12.02□□□□□ -0.49
HSPG2-213ENST00000498495 ITGAMP11215 1152 aa12.02□□□□□ -0.49
HSPG2-213ENST00000498495 TSPAN8P19075 237 aa12.02□□□□□ -0.49
HSPG2-213ENST00000498495 MAOAP21397 527 aa12.02□□□□□ -0.49
HSPG2-213ENST00000498495 HIST1H1TP22492 207 aaPredicted RBP12.02□□□□□ -0.49
HSPG2-213ENST00000498495 ATP5A1P25705 553 aaKnown RBP12.02□□□□□ -0.49
HSPG2-213ENST00000498495 CRHR1P34998 444 aa12.02□□□□□ -0.49
HSPG2-213ENST00000498495 SSR2P43308 183 aa12.02□□□□□ -0.49
HSPG2-213ENST00000498495 TSFMP43897 325 aaKnown RBP12.02□□□□□ -0.49
HSPG2-213ENST00000498495 ARFIP1P53367 373 aa12.02□□□□□ -0.49
HSPG2-213ENST00000498495 MLLT10P55197 1068 aa12.02□□□□□ -0.49
HSPG2-213ENST00000498495 HSD17B7P56937 341 aa12.02□□□□□ -0.49
HSPG2-213ENST00000498495 HERVK_113P63132 956 aa12.02□□□□□ -0.49
HSPG2-213ENST00000498495 CLCQ05315 142 aa12.02□□□□□ -0.49
HSPG2-213ENST00000498495 IFT88Q13099 833 aa12.02□□□□□ -0.49
HSPG2-213ENST00000498495 SLC13A2Q13183 592 aa12.02□□□□□ -0.49
HSPG2-213ENST00000498495 SLAMF1Q13291 335 aa12.02□□□□□ -0.49
HSPG2-213ENST00000498495 MFAP5Q13361 173 aa12.02□□□□□ -0.49
HSPG2-213ENST00000498495 PLEKHN1Q494U1 663 aaPredicted RBP12.02□□□□□ -0.49
HSPG2-213ENST00000498495 UNC50Q53HI1 259 aa12.02□□□□□ -0.49
HSPG2-213ENST00000498495 ZNF678Q5SXM1 525 aa12.02□□□□□ -0.49
HSPG2-213ENST00000498495 SLC6A19Q695T7 634 aa12.02□□□□□ -0.49
HSPG2-213ENST00000498495 PLAG1Q6DJT9 500 aa12.02□□□□□ -0.49
HSPG2-213ENST00000498495 IGFL2Q6UWQ7 119 aa12.02□□□□□ -0.49
HSPG2-213ENST00000498495 SH2D5Q6ZV89 423 aa12.02□□□□□ -0.49
HSPG2-213ENST00000498495 RPS27LQ71UM5 84 aaKnown RBP12.02□□□□□ -0.49
HSPG2-213ENST00000498495 ZNF595Q8IYB9 648 aa12.02□□□□□ -0.49
HSPG2-213ENST00000498495 AMER2Q8N7J2 671 aa12.02□□□□□ -0.49
HSPG2-213ENST00000498495 OR2W6PQ8NHA6 318 aa12.02□□□□□ -0.49
HSPG2-213ENST00000498495 M1APQ8TC57 530 aa12.02□□□□□ -0.49
HSPG2-213ENST00000498495 TRPC4APQ8TEL6 797 aa12.02□□□□□ -0.49
HSPG2-213ENST00000498495 ZNF483Q8TF39 744 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms