RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 RHOXF2Q9BQY4 288 aa17.26■□□□□ 0.35
HOXD11-202ENST00000498438 MS4A8Q9BY19 250 aa17.26■□□□□ 0.35
HOXD11-202ENST00000498438 RNF32Q9H0A6 362 aa17.26■□□□□ 0.35
HOXD11-202ENST00000498438 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.26■□□□□ 0.35
HOXD11-202ENST00000498438 COPS7BQ9H9Q2 264 aaPredicted RBP17.26■□□□□ 0.35
HOXD11-202ENST00000498438 NECTIN3Q9NQS3 549 aa17.26■□□□□ 0.35
HOXD11-202ENST00000498438 ZNF180Q9UJW8 692 aa17.26■□□□□ 0.35
HOXD11-202ENST00000498438 TRAV17A0A0B4J275 112 aa17.25■□□□□ 0.35
HOXD11-202ENST00000498438 EXOC1LA0A1B0GW35 172 aa17.25■□□□□ 0.35
HOXD11-202ENST00000498438 TRIM49D1C9J1S8 452 aa17.25■□□□□ 0.35
HOXD11-202ENST00000498438 ABHD2P08910 425 aa17.25■□□□□ 0.35
HOXD11-202ENST00000498438 MTTPP55157 894 aa17.25■□□□□ 0.35
HOXD11-202ENST00000498438 TGM3Q08188 693 aa17.25■□□□□ 0.35
HOXD11-202ENST00000498438 GRHL2Q6ISB3 625 aa17.25■□□□□ 0.35
HOXD11-202ENST00000498438 H3F3CQ6NXT2 135 aa17.25■□□□□ 0.35
HOXD11-202ENST00000498438 LRRN4CLQ8ND94 238 aa17.25■□□□□ 0.35
HOXD11-202ENST00000498438 ARMC2Q8NEN0 867 aa17.25■□□□□ 0.35
HOXD11-202ENST00000498438 OR7G3Q8NG95 312 aa17.25■□□□□ 0.35
HOXD11-202ENST00000498438 ADAMTS18Q8TE60 1221 aa17.25■□□□□ 0.35
HOXD11-202ENST00000498438 GRHL3Q8TE85 626 aa17.25■□□□□ 0.35
HOXD11-202ENST00000498438 SERINC2Q96SA4 455 aa17.25■□□□□ 0.35
HOXD11-202ENST00000498438 AGPAT4Q9NRZ5 378 aa17.25■□□□□ 0.35
HOXD11-202ENST00000498438 STMN3Q9NZ72 180 aa17.25■□□□□ 0.35
HOXD11-202ENST00000498438 MMACHCQ9Y4U1 282 aa17.25■□□□□ 0.35
HOXD11-202ENST00000498438 USP9YO00507 2555 aaPredicted RBP17.25■□□□□ 0.35
HOXD11-202ENST00000498438 OR5H15A6NDH6 313 aa17.24■□□□□ 0.35
HOXD11-202ENST00000498438 SAGE2PA6NJ88 616 aa17.24■□□□□ 0.35
HOXD11-202ENST00000498438 SH3BGRLO75368 114 aa17.24■□□□□ 0.35
HOXD11-202ENST00000498438 SIX3O95343 332 aaPredicted RBP17.24■□□□□ 0.35
HOXD11-202ENST00000498438 CBX6O95503 412 aa17.24■□□□□ 0.35
HOXD11-202ENST00000498438 CNTFP26441 200 aa17.24■□□□□ 0.35
HOXD11-202ENST00000498438 SERPINB1P30740 379 aa17.24■□□□□ 0.35
HOXD11-202ENST00000498438 HNRNPFP52597 415 aaKnown RBP17.24■□□□□ 0.35
HOXD11-202ENST00000498438 LIM2P55344 173 aa17.24■□□□□ 0.35
HOXD11-202ENST00000498438 GTF2H2Q13888 395 aa17.24■□□□□ 0.35
HOXD11-202ENST00000498438 PCBP2Q15366 365 aaKnown RBP eCLIP17.24■□□□□ 0.35
HOXD11-202ENST00000498438 EIF2S3LQ2VIR3 472 aaKnown RBP17.24■□□□□ 0.35
HOXD11-202ENST00000498438 ACER2Q5QJU3 275 aa17.24■□□□□ 0.35
HOXD11-202ENST00000498438 FHL5Q5TD97 284 aa17.24■□□□□ 0.35
HOXD11-202ENST00000498438 RPUSD3Q6P087 351 aaKnown RBP17.24■□□□□ 0.35
HOXD11-202ENST00000498438 GTF2H2CQ6P1K8 395 aa17.24■□□□□ 0.35
HOXD11-202ENST00000498438 GOLGA7Q7Z5G4 137 aa17.24■□□□□ 0.35
HOXD11-202ENST00000498438 UBE3DQ7Z6J8 389 aa17.24■□□□□ 0.35
HOXD11-202ENST00000498438 MYLK4Q86YV6 388 aaPredicted RBP17.24■□□□□ 0.35
HOXD11-202ENST00000498438 CRLF3Q8IUI8 442 aa17.24■□□□□ 0.35
HOXD11-202ENST00000498438 SCUBE1Q8IWY4 988 aa17.24■□□□□ 0.35
HOXD11-202ENST00000498438 BEST3Q8N1M1 668 aa17.24■□□□□ 0.35
HOXD11-202ENST00000498438 TMEM52Q8NDY8 209 aa17.24■□□□□ 0.35
HOXD11-202ENST00000498438 SCYL1Q96KG9 808 aa17.24■□□□□ 0.35
HOXD11-202ENST00000498438 ZNF354BQ96LW1 612 aa17.24■□□□□ 0.35
HOXD11-202ENST00000498438 KCNC2Q96PR1 638 aa17.24■□□□□ 0.35
HOXD11-202ENST00000498438 CSF3RQ99062 836 aa17.24■□□□□ 0.35
HOXD11-202ENST00000498438 NPAS2Q99743 824 aa17.24■□□□□ 0.35
HOXD11-202ENST00000498438 ACTR8Q9H981 624 aa17.24■□□□□ 0.35
HOXD11-202ENST00000498438 PRDM7Q9NQW5 492 aa17.24■□□□□ 0.35
HOXD11-202ENST00000498438 XPR1Q9UBH6 696 aa17.24■□□□□ 0.35
HOXD11-202ENST00000498438 SPTBN1Q01082 2364 aaKnown RBP17.24■□□□□ 0.35
HOXD11-202ENST00000498438 POLEQ07864 2286 aa17.23■□□□□ 0.35
HOXD11-202ENST00000498438 A8MUA0 341 aa17.23■□□□□ 0.35
HOXD11-202ENST00000498438 RTCAO00442 366 aaKnown RBP17.23■□□□□ 0.35
HOXD11-202ENST00000498438 MAN1A2O60476 641 aa17.23■□□□□ 0.35
HOXD11-202ENST00000498438 TGFB1P01137 390 aa17.23■□□□□ 0.35
HOXD11-202ENST00000498438 RBP1P09455 135 aa17.23■□□□□ 0.35
HOXD11-202ENST00000498438 FAM153BP0C7A2 387 aa17.23■□□□□ 0.35
HOXD11-202ENST00000498438 TAS2R50P59544 299 aa17.23■□□□□ 0.35
HOXD11-202ENST00000498438 DDX39BQ13838 428 aaKnown RBP17.23■□□□□ 0.35
HOXD11-202ENST00000498438 MEP1AQ16819 746 aa17.23■□□□□ 0.35
HOXD11-202ENST00000498438 TSNAXIP1Q2TAA8 658 aa17.23■□□□□ 0.35
HOXD11-202ENST00000498438 FAM153CQ494X1 144 aa17.23■□□□□ 0.35
HOXD11-202ENST00000498438 TMEM35AQ53FP2 167 aa17.23■□□□□ 0.35
HOXD11-202ENST00000498438 FAM180AQ6UWF9 173 aa17.23■□□□□ 0.35
HOXD11-202ENST00000498438 ZNF793Q6ZN11 406 aa17.23■□□□□ 0.35
HOXD11-202ENST00000498438 TRMT10CQ7L0Y3 403 aaKnown RBP17.23■□□□□ 0.35
HOXD11-202ENST00000498438 RNF175Q8N4F7 328 aa17.23■□□□□ 0.35
HOXD11-202ENST00000498438 KIF2BQ8N4N8 673 aa17.23■□□□□ 0.35
HOXD11-202ENST00000498438 SLC5A8Q8N695 610 aa17.23■□□□□ 0.35
HOXD11-202ENST00000498438 PTGR2Q8N8N7 351 aaPredicted RBP17.23■□□□□ 0.35
HOXD11-202ENST00000498438 SRFBP1Q8NEF9 429 aaKnown RBP17.23■□□□□ 0.35
HOXD11-202ENST00000498438 ELP5Q8TE02 316 aa17.23■□□□□ 0.35
HOXD11-202ENST00000498438 TBCDQ9BTW9 1192 aa17.23■□□□□ 0.35
HOXD11-202ENST00000498438 ROGDIQ9GZN7 287 aa17.23■□□□□ 0.35
HOXD11-202ENST00000498438 PRTFDC1Q9NRG1 225 aa17.23■□□□□ 0.35
HOXD11-202ENST00000498438 DAPP1Q9UN19 280 aa17.23■□□□□ 0.35
HOXD11-202ENST00000498438 MRPS33Q9Y291 106 aaKnown RBP17.23■□□□□ 0.35
HOXD11-202ENST00000498438 TNPO3Q9Y5L0 923 aaKnown RBP17.23■□□□□ 0.35
HOXD11-202ENST00000498438 ANKUB1A6NFN9 424 aa17.22■□□□□ 0.35
HOXD11-202ENST00000498438 TGFBR3LH3BV60 316 aa17.22■□□□□ 0.35
HOXD11-202ENST00000498438 CYR61O00622 381 aa17.22■□□□□ 0.35
HOXD11-202ENST00000498438 E2F3O00716 465 aa17.22■□□□□ 0.35
HOXD11-202ENST00000498438 CLDN4O14493 209 aa17.22■□□□□ 0.35
HOXD11-202ENST00000498438 RIPK2O43353 540 aa17.22■□□□□ 0.35
HOXD11-202ENST00000498438 AGFG2O95081 481 aa17.22■□□□□ 0.35
HOXD11-202ENST00000498438 SNRPAP09012 282 aaKnown RBP17.22■□□□□ 0.35
HOXD11-202ENST00000498438 GCAP28676 217 aa17.22■□□□□ 0.35
HOXD11-202ENST00000498438 EEF1DP29692 281 aaKnown RBP17.22■□□□□ 0.35
HOXD11-202ENST00000498438 PIK3CGP48736 1102 aa17.22■□□□□ 0.35
HOXD11-202ENST00000498438 ST13P50502 369 aaKnown RBP17.22■□□□□ 0.35
HOXD11-202ENST00000498438 HSD17B7P56937 341 aa17.22■□□□□ 0.35
HOXD11-202ENST00000498438 SLC13A2Q13183 592 aa17.22■□□□□ 0.35
HOXD11-202ENST00000498438 INAQ16352 499 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms