RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 CDKL2Q92772 493 aa17.33■□□□□ 0.36
PRKCB-209ENST00000498058 NINJ2Q9NZG7 142 aa17.33■□□□□ 0.36
PRKCB-209ENST00000498058 ZFATQ9P243 1243 aa17.33■□□□□ 0.36
PRKCB-209ENST00000498058 CORO1CQ9ULV4 474 aaPredicted RBP17.33■□□□□ 0.36
PRKCB-209ENST00000498058 A0A0G2JN53 185 aa17.32■□□□□ 0.36
PRKCB-209ENST00000498058 TBX6O95947 436 aaPredicted RBP17.32■□□□□ 0.36
PRKCB-209ENST00000498058 ESRRAP11474 423 aaPredicted RBP17.32■□□□□ 0.36
PRKCB-209ENST00000498058 SAT1P21673 171 aa17.32■□□□□ 0.36
PRKCB-209ENST00000498058 ELAVL4P26378 380 aaKnown RBP17.32■□□□□ 0.36
PRKCB-209ENST00000498058 PPP2R1BP30154 601 aa17.32■□□□□ 0.36
PRKCB-209ENST00000498058 PTGER1P34995 402 aa17.32■□□□□ 0.36
PRKCB-209ENST00000498058 GDF5P43026 501 aa17.32■□□□□ 0.36
PRKCB-209ENST00000498058 NR0B1P51843 470 aaKnown RBP17.32■□□□□ 0.36
PRKCB-209ENST00000498058 HNRNPFP52597 415 aaKnown RBP17.32■□□□□ 0.36
PRKCB-209ENST00000498058 CASP6P55212 293 aa17.32■□□□□ 0.36
PRKCB-209ENST00000498058 TAS2R39P59534 338 aa17.32■□□□□ 0.36
PRKCB-209ENST00000498058 MGAT5Q09328 741 aa17.32■□□□□ 0.36
PRKCB-209ENST00000498058 C3P1Q6ZMU1 363 aa17.32■□□□□ 0.36
PRKCB-209ENST00000498058 ZC3HC1Q86WB0 502 aaKnown RBP17.32■□□□□ 0.36
PRKCB-209ENST00000498058 DOLPP1Q86YN1 238 aa17.32■□□□□ 0.36
PRKCB-209ENST00000498058 ARMC10Q8N2F6 343 aa17.32■□□□□ 0.36
PRKCB-209ENST00000498058 TMEM52Q8NDY8 209 aa17.32■□□□□ 0.36
PRKCB-209ENST00000498058 CHST11Q9NPF2 352 aa17.32■□□□□ 0.36
PRKCB-209ENST00000498058 PRDM9Q9NQV7 894 aa17.32■□□□□ 0.36
PRKCB-209ENST00000498058 NSMCE4AQ9NXX6 385 aa17.32■□□□□ 0.36
PRKCB-209ENST00000498058 DYRK1BQ9Y463 629 aa17.32■□□□□ 0.36
PRKCB-209ENST00000498058 HRH3Q9Y5N1 445 aa17.32■□□□□ 0.36
PRKCB-209ENST00000498058 ADGRG4Q8IZF6 3080 aa17.32■□□□□ 0.36
PRKCB-209ENST00000498058 A0A087WUV0 522 aaPredicted RBP17.31■□□□□ 0.36
PRKCB-209ENST00000498058 PRAMEF4O60810 478 aa17.31■□□□□ 0.36
PRKCB-209ENST00000498058 PIAS1O75925 651 aa17.31■□□□□ 0.36
PRKCB-209ENST00000498058 ACSL3O95573 720 aa17.31■□□□□ 0.36
PRKCB-209ENST00000498058 ABHD2P08910 425 aa17.31■□□□□ 0.36
PRKCB-209ENST00000498058 RNH1P13489 461 aaKnown RBP17.31■□□□□ 0.36
PRKCB-209ENST00000498058 AGAP20933 346 aa17.31■□□□□ 0.36
PRKCB-209ENST00000498058 SSTR1P30872 391 aa17.31■□□□□ 0.36
PRKCB-209ENST00000498058 HNRNPH1P31943 449 aaKnown RBP17.31■□□□□ 0.36
PRKCB-209ENST00000498058 TRHRP34981 398 aaPredicted RBP17.31■□□□□ 0.36
PRKCB-209ENST00000498058 PTGER4P35408 488 aa17.31■□□□□ 0.36
PRKCB-209ENST00000498058 RFC3P40938 356 aa17.31■□□□□ 0.36
PRKCB-209ENST00000498058 ILF2Q12905 390 aaKnown RBP17.31■□□□□ 0.36
PRKCB-209ENST00000498058 PRAMEF9Q5VWM5 478 aa17.31■□□□□ 0.36
PRKCB-209ENST00000498058 CAPN12Q6ZSI9 719 aa17.31■□□□□ 0.36
PRKCB-209ENST00000498058 CEP97Q8IW35 865 aa17.31■□□□□ 0.36
PRKCB-209ENST00000498058 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.31■□□□□ 0.363e-6■■■■■ 55.7
PRKCB-209ENST00000498058 AGAP11Q8TF27 550 aa17.31■□□□□ 0.36
PRKCB-209ENST00000498058 LURAP1Q96LR2 239 aa17.31■□□□□ 0.36
PRKCB-209ENST00000498058 DMRTA2Q96SC8 542 aa17.31■□□□□ 0.36
PRKCB-209ENST00000498058 AIF1LQ9BQI0 150 aa17.31■□□□□ 0.36
PRKCB-209ENST00000498058 MCMBPQ9BTE3 642 aa17.31■□□□□ 0.36
PRKCB-209ENST00000498058 TXLNGYQ9BZA5 131 aa17.31■□□□□ 0.36
PRKCB-209ENST00000498058 SMYD2Q9NRG4 433 aa17.31■□□□□ 0.36
PRKCB-209ENST00000498058 TACC2O95359 2948 aa17.31■□□□□ 0.36
PRKCB-209ENST00000498058 EML6Q6ZMW3 1958 aa17.3■□□□□ 0.36
PRKCB-209ENST00000498058 FAM95CA0A1B0GW59 222 aa17.3■□□□□ 0.36
PRKCB-209ENST00000498058 PABPN1LA6NDY0 278 aaKnown RBP17.3■□□□□ 0.36
PRKCB-209ENST00000498058 PRKNO60260 465 aaPredicted RBP17.3■□□□□ 0.36
PRKCB-209ENST00000498058 SERPINA6P08185 405 aa17.3■□□□□ 0.36
PRKCB-209ENST00000498058 COX6B1P14854 86 aa17.3■□□□□ 0.36
PRKCB-209ENST00000498058 CYB561P49447 251 aa17.3■□□□□ 0.36
PRKCB-209ENST00000498058 HLCSP50747 726 aa17.3■□□□□ 0.36
PRKCB-209ENST00000498058 GPR143P51810 404 aa17.3■□□□□ 0.36
PRKCB-209ENST00000498058 GPX6P59796 221 aa17.3■□□□□ 0.36
PRKCB-209ENST00000498058 KRTAP10-9P60411 292 aa17.3■□□□□ 0.36
PRKCB-209ENST00000498058 BTN3A2P78410 334 aa17.3■□□□□ 0.36
PRKCB-209ENST00000498058 NAB1Q13506 487 aa17.3■□□□□ 0.36
PRKCB-209ENST00000498058 TSNQ15631 228 aaKnown RBP17.3■□□□□ 0.36
PRKCB-209ENST00000498058 ADNP2Q6IQ32 1131 aa17.3■□□□□ 0.36
PRKCB-209ENST00000498058 C16orf47Q6ZP98 133 aaPredicted RBP17.3■□□□□ 0.36
PRKCB-209ENST00000498058 SLCO4C1Q6ZQN7 724 aa17.3■□□□□ 0.36
PRKCB-209ENST00000498058 GDF7Q7Z4P5 450 aa17.3■□□□□ 0.36
PRKCB-209ENST00000498058 SCUBE1Q8IWY4 988 aa17.3■□□□□ 0.36
PRKCB-209ENST00000498058 GHDCQ8N2G8 530 aa17.3■□□□□ 0.36
PRKCB-209ENST00000498058 TBC1D19Q8N5T2 526 aa17.3■□□□□ 0.36
PRKCB-209ENST00000498058 HORMAD2Q8N7B1 307 aa17.3■□□□□ 0.36
PRKCB-209ENST00000498058 TRPV3Q8NET8 790 aa17.3■□□□□ 0.36
PRKCB-209ENST00000498058 UBLCP1Q8WVY7 318 aaPredicted RBP17.3■□□□□ 0.36
PRKCB-209ENST00000498058 MTFMTQ96DP5 389 aaKnown RBP17.3■□□□□ 0.36
PRKCB-209ENST00000498058 CCDC77Q9BR77 488 aa17.3■□□□□ 0.36
PRKCB-209ENST00000498058 CLK4Q9HAZ1 481 aaKnown RBP17.3■□□□□ 0.36
PRKCB-209ENST00000498058 MOCS1Q9NZB8 636 aa17.3■□□□□ 0.36
PRKCB-209ENST00000498058 OARD1Q9Y530 152 aa17.3■□□□□ 0.36
PRKCB-209ENST00000498058 POLQO75417 2590 aa17.3■□□□□ 0.36
PRKCB-209ENST00000498058 UQCRHLA0A096LP55 91 aa17.29■□□□□ 0.36
PRKCB-209ENST00000498058 TRBV11-1A0A0K0K1C0 115 aa17.29■□□□□ 0.36
PRKCB-209ENST00000498058 TCRBV9S1A1TA0A576 114 aa17.29■□□□□ 0.36
PRKCB-209ENST00000498058 RIPK2O43353 540 aa17.29■□□□□ 0.36
PRKCB-209ENST00000498058 WISP3O95389 354 aaPredicted RBP17.29■□□□□ 0.36
PRKCB-209ENST00000498058 CLDN14O95500 239 aa17.29■□□□□ 0.36
PRKCB-209ENST00000498058 ABOP16442 354 aa17.29■□□□□ 0.36
PRKCB-209ENST00000498058 ZNF24P17028 368 aa17.29■□□□□ 0.36
PRKCB-209ENST00000498058 SLC6A12P48065 614 aa17.29■□□□□ 0.36
PRKCB-209ENST00000498058 MEOX1P50221 254 aa17.29■□□□□ 0.36
PRKCB-209ENST00000498058 SMSP52788 366 aa17.29■□□□□ 0.36
PRKCB-209ENST00000498058 SKP1P63208 163 aa17.29■□□□□ 0.36
PRKCB-209ENST00000498058 CDKL1Q00532 357 aa17.29■□□□□ 0.36
PRKCB-209ENST00000498058 NIPAL1Q6NVV3 410 aa17.29■□□□□ 0.36
PRKCB-209ENST00000498058 MDGA2Q7Z553 956 aa17.29■□□□□ 0.36
PRKCB-209ENST00000498058 VN1R5Q7Z5H4 357 aa17.29■□□□□ 0.36
PRKCB-209ENST00000498058 SULF2Q8IWU5 870 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms