RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 MYO1DO94832 1006 aa15.26■□□□□ 0.03
VIM-208ENST00000497849 FGGP02679 453 aa15.26■□□□□ 0.03
VIM-208ENST00000497849 BMP5P22003 454 aa15.26■□□□□ 0.03
VIM-208ENST00000497849 FDFT1P37268 417 aa15.26■□□□□ 0.03
VIM-208ENST00000497849 MAN2A2P49641 1150 aa15.26■□□□□ 0.03
VIM-208ENST00000497849 SESN2P58004 480 aaPredicted RBP15.26■□□□□ 0.03
VIM-208ENST00000497849 FOXO1Q12778 655 aa15.26■□□□□ 0.03
VIM-208ENST00000497849 CUL1Q13616 776 aa15.26■□□□□ 0.03
VIM-208ENST00000497849 SIX1Q15475 284 aaPredicted RBP15.26■□□□□ 0.03
VIM-208ENST00000497849 ZNF750Q32MQ0 723 aa15.26■□□□□ 0.03
VIM-208ENST00000497849 Q5PR19 223 aa15.26■□□□□ 0.03
VIM-208ENST00000497849 WLSQ5T9L3 541 aa15.26■□□□□ 0.03
VIM-208ENST00000497849 PRUNE1Q86TP1 453 aa15.26■□□□□ 0.03
VIM-208ENST00000497849 GPALPP1Q8IXQ4 340 aa15.26■□□□□ 0.03
VIM-208ENST00000497849 VWA5B2Q8N398 1253 aa15.26■□□□□ 0.03
VIM-208ENST00000497849 PRELID2Q8N945 189 aa15.26■□□□□ 0.03
VIM-208ENST00000497849 SARAFQ96BY9 339 aa15.26■□□□□ 0.03
VIM-208ENST00000497849 VMP1Q96GC9 406 aa15.26■□□□□ 0.03
VIM-208ENST00000497849 IL1RL2Q9HB29 575 aa15.26■□□□□ 0.03
VIM-208ENST00000497849 ZFATQ9P243 1243 aa15.26■□□□□ 0.03
VIM-208ENST00000497849 SPRR3Q9UBC9 169 aa15.26■□□□□ 0.03
VIM-208ENST00000497849 KIAA1549Q9HCM3 1950 aa15.25■□□□□ 0.03
VIM-208ENST00000497849 ATP6AP2A0A1C7CYW4 349 aa15.25■□□□□ 0.03
VIM-208ENST00000497849 TUBAL3A6NHL2 446 aa15.25■□□□□ 0.03
VIM-208ENST00000497849 HSPB2A8KAH6 182 aa15.25■□□□□ 0.03
VIM-208ENST00000497849 E5RI56 91 aa15.25■□□□□ 0.03
VIM-208ENST00000497849 NDUFS4O43181 175 aa15.25■□□□□ 0.03
VIM-208ENST00000497849 ZBTB14O43829 449 aa15.25■□□□□ 0.03
VIM-208ENST00000497849 ATP6AP2O75787 350 aa15.25■□□□□ 0.03
VIM-208ENST00000497849 VAPBO95292 243 aa15.25■□□□□ 0.03
VIM-208ENST00000497849 MPC1LP0DKB6 136 aa15.25■□□□□ 0.03
VIM-208ENST00000497849 GABRA1P14867 456 aa15.25■□□□□ 0.03
VIM-208ENST00000497849 CNR1P21554 472 aa15.25■□□□□ 0.03
VIM-208ENST00000497849 SOX3P41225 446 aa15.25■□□□□ 0.03
VIM-208ENST00000497849 SNX1Q13596 522 aa15.25■□□□□ 0.03
VIM-208ENST00000497849 TERF2Q15554 542 aa15.25■□□□□ 0.03
VIM-208ENST00000497849 HSPB2Q16082 182 aa15.25■□□□□ 0.03
VIM-208ENST00000497849 HYAL4Q2M3T9 481 aa15.25■□□□□ 0.03
VIM-208ENST00000497849 RNF187Q5TA31 235 aaPredicted RBP15.25■□□□□ 0.03
VIM-208ENST00000497849 MRNIPQ6NTE8 343 aa15.25■□□□□ 0.03
VIM-208ENST00000497849 CES3Q6UWW8 571 aa15.25■□□□□ 0.03
VIM-208ENST00000497849 GK5Q6ZS86 529 aa15.25■□□□□ 0.03
VIM-208ENST00000497849 SDCCAG8Q86SQ7 713 aaPredicted RBP15.25■□□□□ 0.03
VIM-208ENST00000497849 RASGEF1CQ8N431 466 aa15.25■□□□□ 0.03
VIM-208ENST00000497849 KIF18AQ8NI77 898 aa15.25■□□□□ 0.03
VIM-208ENST00000497849 LINC01560Q8TB33 94 aa15.25■□□□□ 0.03
VIM-208ENST00000497849 ASB15Q8WXK1 588 aa15.25■□□□□ 0.03
VIM-208ENST00000497849 ZNF592Q92610 1267 aa15.25■□□□□ 0.03
VIM-208ENST00000497849 NCLNQ969V3 563 aa15.25■□□□□ 0.03
VIM-208ENST00000497849 MFSD3Q96ES6 412 aa15.25■□□□□ 0.03
VIM-208ENST00000497849 CAPZA3Q96KX2 299 aa15.25■□□□□ 0.03
VIM-208ENST00000497849 FAM173AQ9BQD7 235 aa15.25■□□□□ 0.03
VIM-208ENST00000497849 VPS9D1Q9Y2B5 631 aa15.25■□□□□ 0.03
VIM-208ENST00000497849 MED16Q9Y2X0 877 aa15.25■□□□□ 0.03
VIM-208ENST00000497849 CLCA1A8K7I4 914 aa15.24■□□□□ 0.03
VIM-208ENST00000497849 DVL2O14641 736 aa15.24■□□□□ 0.03
VIM-208ENST00000497849 APRTP07741 180 aa15.24■□□□□ 0.03
VIM-208ENST00000497849 ZNF888P0CJ79 500 aaPredicted RBP15.24■□□□□ 0.03
VIM-208ENST00000497849 CDH1P12830 882 aa15.24■□□□□ 0.03
VIM-208ENST00000497849 ETS1P14921 441 aa15.24■□□□□ 0.03
VIM-208ENST00000497849 DNASE1L1P49184 302 aa15.24■□□□□ 0.03
VIM-208ENST00000497849 PWP1Q13610 501 aa15.24■□□□□ 0.03
VIM-208ENST00000497849 SLC10A1Q14973 349 aa15.24■□□□□ 0.03
VIM-208ENST00000497849 CENPUQ71F23 418 aa15.24■□□□□ 0.03
VIM-208ENST00000497849 C17orf64Q86WR6 236 aa15.24■□□□□ 0.03
VIM-208ENST00000497849 SIMC1Q8NDZ2 872 aa15.24■□□□□ 0.03
VIM-208ENST00000497849 LRRC46Q96FV0 321 aa15.24■□□□□ 0.03
VIM-208ENST00000497849 RASL10BQ96S79 203 aa15.24■□□□□ 0.03
VIM-208ENST00000497849 TCF12Q99081 682 aa15.24■□□□□ 0.03
VIM-208ENST00000497849 AARSD1Q9BTE6 412 aaKnown RBP15.24■□□□□ 0.03
VIM-208ENST00000497849 PCBD2Q9H0N5 130 aa15.24■□□□□ 0.03
VIM-208ENST00000497849 LDAHQ9H6V9 325 aa15.24■□□□□ 0.03
VIM-208ENST00000497849 SEMA4BQ9NPR2 832 aaPredicted RBP15.24■□□□□ 0.03
VIM-208ENST00000497849 RAB6BQ9NRW1 208 aa15.24■□□□□ 0.03
VIM-208ENST00000497849 MYOTQ9UBF9 498 aa15.24■□□□□ 0.03
VIM-208ENST00000497849 FOXD3Q9UJU5 478 aaPredicted RBP15.24■□□□□ 0.03
VIM-208ENST00000497849 CLDN16Q9Y5I7 305 aa15.24■□□□□ 0.03
VIM-208ENST00000497849 FREM3P0C091 2139 aa15.23■□□□□ 0.03
VIM-208ENST00000497849 KDM4EB2RXH2 506 aaPredicted RBP15.23■□□□□ 0.03
VIM-208ENST00000497849 SMAD7O15105 426 aaKnown RBP15.23■□□□□ 0.03
VIM-208ENST00000497849 ARHGEF9O43307 516 aa15.23■□□□□ 0.03
VIM-208ENST00000497849 HCN1O60741 890 aa15.23■□□□□ 0.03
VIM-208ENST00000497849 ZFAND5O76080 213 aa15.23■□□□□ 0.03
VIM-208ENST00000497849 IFNB1P01574 187 aa15.23■□□□□ 0.03
VIM-208ENST00000497849 HRGP04196 525 aa15.23■□□□□ 0.03
VIM-208ENST00000497849 F7P08709 466 aaPredicted RBP15.23■□□□□ 0.03
VIM-208ENST00000497849 PPP2R1BP30154 601 aa15.23■□□□□ 0.03
VIM-208ENST00000497849 STIP1P31948 543 aaKnown RBP15.23■□□□□ 0.03
VIM-208ENST00000497849 CEACAM8P31997 349 aaPredicted RBP15.23■□□□□ 0.03
VIM-208ENST00000497849 GRK3P35626 688 aa15.23■□□□□ 0.03
VIM-208ENST00000497849 SKP1P63208 163 aa15.23■□□□□ 0.03
VIM-208ENST00000497849 PPP2R2BQ00005 443 aa15.23■□□□□ 0.03
VIM-208ENST00000497849 POU4F3Q15319 338 aa15.23■□□□□ 0.03
VIM-208ENST00000497849 OASLQ15646 514 aaKnown RBP15.23■□□□□ 0.03
VIM-208ENST00000497849 TTLL9Q3SXZ7 439 aa15.23■□□□□ 0.03
VIM-208ENST00000497849 NIPAL1Q6NVV3 410 aa15.23■□□□□ 0.03
VIM-208ENST00000497849 UBE2R2Q712K3 238 aaPredicted RBP15.23■□□□□ 0.03
VIM-208ENST00000497849 ULK2Q8IYT8 1036 aa15.23■□□□□ 0.03
VIM-208ENST00000497849 TNIP2Q8NFZ5 429 aa15.23■□□□□ 0.03
VIM-208ENST00000497849 UTP15Q8TED0 518 aaKnown RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms