RNA–Protein interactions for RNA: ENST00000497106.5

USP54-215, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,773 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-215ENST00000497106 WDR37Q9Y2I8 494 aa7.99□□□□□ -1.13
USP54-215ENST00000497106 PCDHGA4Q9Y5G9 962 aa7.99□□□□□ -1.13
USP54-215ENST00000497106 MYO1GB0I1T2 1018 aa7.99□□□□□ -1.13
USP54-215ENST00000497106 BTN3A3O00478 584 aa7.99□□□□□ -1.13
USP54-215ENST00000497106 ZBTB11O95625 1053 aaPredicted RBP7.99□□□□□ -1.13
USP54-215ENST00000497106 SH3BGRP55822 239 aaPredicted RBP7.99□□□□□ -1.13
USP54-215ENST00000497106 C21orf58P58505 322 aa7.99□□□□□ -1.13
USP54-215ENST00000497106 MTPNP58546 118 aa7.99□□□□□ -1.13
USP54-215ENST00000497106 CLPPQ16740 277 aaPredicted RBP7.99□□□□□ -1.13
USP54-215ENST00000497106 MAMSTRQ6ZN01 415 aa7.99□□□□□ -1.13
USP54-215ENST00000497106 FAM92BQ6ZTR7 304 aa7.99□□□□□ -1.13
USP54-215ENST00000497106 ZDHHC13Q8IUH4 622 aa7.99□□□□□ -1.13
USP54-215ENST00000497106 ZC3H7AQ8IWR0 971 aaKnown RBP7.99□□□□□ -1.13
USP54-215ENST00000497106 PACRGLQ8N7B6 248 aa7.99□□□□□ -1.13
USP54-215ENST00000497106 ZNF184Q99676 751 aaPredicted RBP7.99□□□□□ -1.13
USP54-215ENST00000497106 LRRC61Q9BV99 259 aa7.99□□□□□ -1.13
USP54-215ENST00000497106 IRF2BPLQ9H1B7 796 aa7.99□□□□□ -1.13
USP54-215ENST00000497106 PIF1Q9H611 641 aa7.99□□□□□ -1.13
USP54-215ENST00000497106 BLOC1S6Q9UL45 172 aa7.99□□□□□ -1.13
USP54-215ENST00000497106 SLC6A14Q9UN76 642 aa7.99□□□□□ -1.13
USP54-215ENST00000497106 SRPK3Q9UPE1 567 aa7.99□□□□□ -1.13
USP54-215ENST00000497106 DOCK6Q96HP0 2047 aa7.99□□□□□ -1.13
USP54-215ENST00000497106 CPED1A4D0V7 1026 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 KRBA1A5PL33 1030 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 AK1P00568 194 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 IFNA16P05015 189 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 GSNP06396 782 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 HIST1H1TP22492 207 aaPredicted RBP7.98□□□□□ -1.13
USP54-215ENST00000497106 CSNK1EP49674 416 aaKnown RBP7.98□□□□□ -1.13
USP54-215ENST00000497106 CRISP3P54108 245 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 VSX2P58304 361 aaPredicted RBP7.98□□□□□ -1.13
USP54-215ENST00000497106 HSPB3Q12988 150 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 DEFB133Q30KQ1 61 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 TLDC1Q6P9B6 456 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 ARL14Q8N4G2 192 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 FBXO30Q8TB52 745 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 NT5CQ8TCD5 201 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 SPPL2AQ8TCT8 520 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 OR4K3Q96R72 315 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 ZNF347Q96SE7 839 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 SEPHS2Q99611 448 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 PRDM9Q9NQV7 894 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 SLC28A2O43868 658 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 TBX19O60806 448 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 C6orf47O95873 294 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 UQCRBP14927 111 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 MAGP20916 626 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 CPOXP36551 454 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 RAB8AP61006 207 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 ELOAQ14241 798 aaKnown RBP7.98□□□□□ -1.13
USP54-215ENST00000497106 GK3PQ14409 553 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 AMZ1Q400G9 498 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 RASGRP3Q8IV61 690 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 FAM47BQ8NA70 645 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 ZNF548Q8NEK5 533 aaPredicted RBP7.98□□□□□ -1.13
USP54-215ENST00000497106 OR52N2Q8NGI0 321 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 TANKQ92844 425 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 CENPNQ96H22 339 aaPredicted RBP7.98□□□□□ -1.13
USP54-215ENST00000497106 RBM18Q96H35 190 aaKnown RBP7.98□□□□□ -1.13
USP54-215ENST00000497106 MAGED4Q96JG8 741 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 TGM7Q96PF1 710 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 ELF4Q99607 663 aaPredicted RBP7.98□□□□□ -1.13
USP54-215ENST00000497106 MAGIXQ9H6Y5 334 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 EGFL7Q9UHF1 273 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 LRCH1Q9Y2L9 728 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 HYKKA2RU49 373 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 KHNYNO15037 678 aaKnown RBP7.98□□□□□ -1.13
USP54-215ENST00000497106 HS6ST1O60243 411 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 NT5EP21589 574 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 PSMB5P28074 263 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 PTDSS1P48651 473 aaKnown RBP7.98□□□□□ -1.13
USP54-215ENST00000497106 IL1RL1Q01638 556 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 RUNDC3AQ59EK9 446 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 IRAK1BP1Q5VVH5 260 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 IZUMO2Q6UXV1 221 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 SERPINA11Q86U17 422 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 LRRC25Q8N386 305 aaPredicted RBP7.98□□□□□ -1.13
USP54-215ENST00000497106 OR2A1Q8NGT9 310 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 COL26A1Q96A83 441 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 ZNF764Q96H86 408 aaPredicted RBP7.98□□□□□ -1.13
USP54-215ENST00000497106 LRIT1Q9P2V4 623 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 A0A1B0GVT2 93 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 TMEM221A6NGB7 291 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 M0R296 226 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 HAT1O14929 419 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 EMC8O43402 210 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 FHP07954 510 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 ATP6V1B2P21281 511 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 AGXTP21549 392 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 CAPZBP47756 277 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 SCARB2Q14108 478 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 EIPR1Q53HC9 387 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 SNAP47Q5SQN1 464 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 PGM2L1Q6PCE3 622 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 HIPK1Q86Z02 1210 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 SPPL2CQ8IUH8 684 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 C1orf210Q8IVY1 113 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 SLC44A2Q8IWA5 706 aaPredicted RBP7.98□□□□□ -1.13
USP54-215ENST00000497106 C17orf50Q8WW18 174 aa7.98□□□□□ -1.13
USP54-215ENST00000497106 JPH3Q8WXH2 748 aaPredicted RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms