RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 BACE1P56817 501 aa2.36□□□□□ -2.03
VPS26A-208ENST00000497022 CNTN1Q12860 1018 aa2.36□□□□□ -2.03
VPS26A-208ENST00000497022 RASA2Q15283 850 aa2.36□□□□□ -2.03
VPS26A-208ENST00000497022 CCL14Q16627 93 aa2.36□□□□□ -2.03
VPS26A-208ENST00000497022 KLHL10Q6JEL2 608 aa2.36□□□□□ -2.03
VPS26A-208ENST00000497022 SLC27A4Q6P1M0 643 aa2.36□□□□□ -2.03
VPS26A-208ENST00000497022 ERN2Q76MJ5 926 aaKnown RBP2.36□□□□□ -2.03
VPS26A-208ENST00000497022 ADCK2Q7Z695 626 aa2.36□□□□□ -2.03
VPS26A-208ENST00000497022 CCAR2Q8N163 923 aaKnown RBP2.36□□□□□ -2.03
VPS26A-208ENST00000497022 OCC1Q8TAD7 63 aa2.36□□□□□ -2.03
VPS26A-208ENST00000497022 BADQ92934 168 aa2.36□□□□□ -2.03
VPS26A-208ENST00000497022 VPS33AQ96AX1 596 aa2.36□□□□□ -2.03
VPS26A-208ENST00000497022 TSSK2Q96PF2 358 aa2.36□□□□□ -2.03
VPS26A-208ENST00000497022 RCHY1Q96PM5 261 aa2.36□□□□□ -2.03
VPS26A-208ENST00000497022 MGME1Q9BQP7 344 aa2.36□□□□□ -2.03
VPS26A-208ENST00000497022 TXLNGYQ9BZA5 131 aa2.36□□□□□ -2.03
VPS26A-208ENST00000497022 NACAP1Q9BZK3 213 aa2.36□□□□□ -2.03
VPS26A-208ENST00000497022 SLC39A8Q9C0K1 460 aa2.36□□□□□ -2.03
VPS26A-208ENST00000497022 RABEP2Q9H5N1 569 aa2.36□□□□□ -2.03
VPS26A-208ENST00000497022 SP140LQ9H930 580 aa2.36□□□□□ -2.03
VPS26A-208ENST00000497022 CUTCQ9NTM9 273 aa2.36□□□□□ -2.03
VPS26A-208ENST00000497022 TMOD3Q9NYL9 352 aa2.36□□□□□ -2.03
VPS26A-208ENST00000497022 DHRS4-AS1Q9P1J3 65 aa2.36□□□□□ -2.03
VPS26A-208ENST00000497022 MGAT4AQ9UM21 535 aa2.36□□□□□ -2.03
VPS26A-208ENST00000497022 RAI1Q7Z5J4 1906 aaPredicted RBP2.35□□□□□ -2.03
VPS26A-208ENST00000497022 IGKV6D-21A0A0A0MT36 114 aa2.35□□□□□ -2.03
VPS26A-208ENST00000497022 TEX48A0A1B0GUV7 120 aa2.35□□□□□ -2.03
VPS26A-208ENST00000497022 ANXA2P2A6NMY6 339 aa2.35□□□□□ -2.03
VPS26A-208ENST00000497022 PPIP5K2O43314 1243 aa2.35□□□□□ -2.03
VPS26A-208ENST00000497022 SRPX2O60687 465 aaPredicted RBP2.35□□□□□ -2.03
VPS26A-208ENST00000497022 FCGR3BO75015 233 aa2.35□□□□□ -2.03
VPS26A-208ENST00000497022 ZNF253O75346 499 aa2.35□□□□□ -2.03
VPS26A-208ENST00000497022 KBTBD11O94819 623 aa2.35□□□□□ -2.03
VPS26A-208ENST00000497022 PGLSO95336 258 aa2.35□□□□□ -2.03
VPS26A-208ENST00000497022 FGF19O95750 216 aa2.35□□□□□ -2.03
VPS26A-208ENST00000497022 DNTTP04053 509 aa2.35□□□□□ -2.03
VPS26A-208ENST00000497022 SUPT20HL2P0C7V6 817 aa2.35□□□□□ -2.03
VPS26A-208ENST00000497022 SP9P0CG40 484 aa2.35□□□□□ -2.03
VPS26A-208ENST00000497022 DLATP10515 647 aaKnown RBP2.35□□□□□ -2.03
VPS26A-208ENST00000497022 UMPSP11172 480 aa2.35□□□□□ -2.03
VPS26A-208ENST00000497022 KRT3P12035 628 aa2.35□□□□□ -2.03
VPS26A-208ENST00000497022 ZBTB25P24278 435 aa2.35□□□□□ -2.03
VPS26A-208ENST00000497022 PSMB4P28070 264 aa2.35□□□□□ -2.03
VPS26A-208ENST00000497022 PEX3P56589 373 aa2.35□□□□□ -2.03
VPS26A-208ENST00000497022 IGLV3-21P80748 117 aaPredicted RBP2.35□□□□□ -2.03
VPS26A-208ENST00000497022 RBBP4Q09028 425 aa2.35□□□□□ -2.03
VPS26A-208ENST00000497022 CAPRIN1Q14444 709 aaKnown RBP2.35□□□□□ -2.03
VPS26A-208ENST00000497022 RFTN1Q14699 578 aaPredicted RBP2.35□□□□□ -2.03
VPS26A-208ENST00000497022 TIMM50Q3ZCQ8 353 aa2.35□□□□□ -2.03
VPS26A-208ENST00000497022 VWA2Q5GFL6 755 aa2.35□□□□□ -2.03
VPS26A-208ENST00000497022 MARC1Q5VT66 337 aa2.35□□□□□ -2.03
VPS26A-208ENST00000497022 FAM46CQ5VWP2 391 aa2.35□□□□□ -2.03
VPS26A-208ENST00000497022 RPUSD3Q6P087 351 aaKnown RBP2.35□□□□□ -2.03
VPS26A-208ENST00000497022 C16orf54Q6UWD8 224 aa2.35□□□□□ -2.03
VPS26A-208ENST00000497022 C17orf107Q6ZR85 190 aa2.35□□□□□ -2.03
VPS26A-208ENST00000497022 Q6ZVH6 145 aa2.35□□□□□ -2.03
VPS26A-208ENST00000497022 RFPL4BQ6ZWI9 263 aa2.35□□□□□ -2.03
VPS26A-208ENST00000497022 RAPH1Q70E73 1250 aa2.35□□□□□ -2.03
VPS26A-208ENST00000497022 TBC1D10CQ8IV04 446 aa2.35□□□□□ -2.03
VPS26A-208ENST00000497022 NME8Q8N427 588 aa2.35□□□□□ -2.03
VPS26A-208ENST00000497022 IQUBQ8NA54 791 aa2.35□□□□□ -2.03
VPS26A-208ENST00000497022 OR6T1Q8NGN1 323 aa2.35□□□□□ -2.03
VPS26A-208ENST00000497022 HEXDCQ8WVB3 486 aa2.35□□□□□ -2.03
VPS26A-208ENST00000497022 PCNPQ8WW12 178 aaKnown RBP2.35□□□□□ -2.03
VPS26A-208ENST00000497022 LIPHQ8WWY8 451 aa2.35□□□□□ -2.03
VPS26A-208ENST00000497022 SMPDL3AQ92484 453 aa2.35□□□□□ -2.03
VPS26A-208ENST00000497022 LINC00167Q96N53 147 aa2.35□□□□□ -2.03
VPS26A-208ENST00000497022 ANKRD27Q96NW4 1050 aa2.35□□□□□ -2.03
VPS26A-208ENST00000497022 HSD17B14Q9BPX1 270 aa2.35□□□□□ -2.03
VPS26A-208ENST00000497022 TEX13BQ9BXU2 312 aa2.35□□□□□ -2.03
VPS26A-208ENST00000497022 RAB9BQ9NP90 201 aa2.35□□□□□ -2.03
VPS26A-208ENST00000497022 IKZF3Q9UKT9 509 aa2.35□□□□□ -2.03
VPS26A-208ENST00000497022 SLC6A5Q9Y345 797 aa2.35□□□□□ -2.03
VPS26A-208ENST00000497022 PCDHGA1Q9Y5H4 931 aa2.35□□□□□ -2.03
VPS26A-208ENST00000497022 CPQQ9Y646 472 aa2.35□□□□□ -2.03
VPS26A-208ENST00000497022 COL4A4P53420 1690 aaPredicted RBP2.34□□□□□ -2.03
VPS26A-208ENST00000497022 SRRM4A7MD48 611 aaKnown RBP2.34□□□□□ -2.03
VPS26A-208ENST00000497022 GIG44P09565 113 aaPredicted RBP2.34□□□□□ -2.03
VPS26A-208ENST00000497022 ANKRD34CP0C6C1 535 aa2.34□□□□□ -2.03
VPS26A-208ENST00000497022 LBPP18428 481 aa2.34□□□□□ -2.03
VPS26A-208ENST00000497022 CHRNA3P32297 505 aa2.34□□□□□ -2.03
VPS26A-208ENST00000497022 SLC1A3P43003 542 aa2.34□□□□□ -2.03
VPS26A-208ENST00000497022 CRKLP46109 303 aaKnown RBP2.34□□□□□ -2.03
VPS26A-208ENST00000497022 PTENP60484 403 aa2.34□□□□□ -2.03
VPS26A-208ENST00000497022 RPS27AP62979 156 aaKnown RBP2.34□□□□□ -2.03
VPS26A-208ENST00000497022 FASTKQ14296 549 aaKnown RBP2.34□□□□□ -2.03
VPS26A-208ENST00000497022 LTB4RQ15722 352 aa2.34□□□□□ -2.03
VPS26A-208ENST00000497022 SLC22A6Q4U2R8 563 aa2.34□□□□□ -2.03
VPS26A-208ENST00000497022 SPOUT1Q5T280 376 aaKnown RBP2.34□□□□□ -2.03
VPS26A-208ENST00000497022 ZNF770Q6IQ21 691 aaPredicted RBP2.34□□□□□ -2.03
VPS26A-208ENST00000497022 SLC30A6Q6NXT4 461 aa2.34□□□□□ -2.03
VPS26A-208ENST00000497022 ARMCX5Q6P1M9 558 aa2.34□□□□□ -2.03
VPS26A-208ENST00000497022 RFWD3Q6PCD5 774 aa2.34□□□□□ -2.03
VPS26A-208ENST00000497022 PAMR1Q6UXH9 720 aa2.34□□□□□ -2.03
VPS26A-208ENST00000497022 CCDC186Q7Z3E2 898 aa2.34□□□□□ -2.03
VPS26A-208ENST00000497022 NUFIP2Q7Z417 695 aaKnown RBP2.34□□□□□ -2.03
VPS26A-208ENST00000497022 DNAJB7Q7Z6W7 309 aaPredicted RBP2.34□□□□□ -2.03
VPS26A-208ENST00000497022 SLC43A2Q8N370 569 aa2.34□□□□□ -2.03
VPS26A-208ENST00000497022 ZNRF1Q8ND25 227 aa2.34□□□□□ -2.03
VPS26A-208ENST00000497022 OR6F1Q8NGZ6 308 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms