RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 ZNF592Q92610 1267 aa14.74□□□□□ -0.05
HDAC4-213ENST00000496347 ESAMQ96AP7 390 aa14.74□□□□□ -0.05
HDAC4-213ENST00000496347 C5orf34Q96MH7 638 aa14.74□□□□□ -0.05
HDAC4-213ENST00000496347 QRFPRQ96P65 431 aa14.74□□□□□ -0.05
HDAC4-213ENST00000496347 KCNC2Q96PR1 638 aa14.74□□□□□ -0.05
HDAC4-213ENST00000496347 TAAR6Q96RI8 345 aa14.74□□□□□ -0.05
HDAC4-213ENST00000496347 SERINC2Q96SA4 455 aa14.74□□□□□ -0.05
HDAC4-213ENST00000496347 UTP23Q9BRU9 249 aaKnown RBP14.74□□□□□ -0.05
HDAC4-213ENST00000496347 ROGDIQ9GZN7 287 aa14.74□□□□□ -0.05
HDAC4-213ENST00000496347 ERRFI1Q9UJM3 462 aaPredicted RBP14.74□□□□□ -0.05
HDAC4-213ENST00000496347 CRYBG3Q68DQ2 2970 aa14.73□□□□□ -0.05
HDAC4-213ENST00000496347 NBPF19A0A087WUL8 3843 aa14.73□□□□□ -0.05
HDAC4-213ENST00000496347 HMX2A2RU54 273 aa14.73□□□□□ -0.05
HDAC4-213ENST00000496347 CLDN4O14493 209 aa14.73□□□□□ -0.05
HDAC4-213ENST00000496347 RASAL1O95294 804 aa14.73□□□□□ -0.05
HDAC4-213ENST00000496347 TBX6O95947 436 aaPredicted RBP14.73□□□□□ -0.05
HDAC4-213ENST00000496347 F10P00742 488 aa14.73□□□□□ -0.05
HDAC4-213ENST00000496347 LDLRP01130 860 aa14.73□□□□□ -0.05
HDAC4-213ENST00000496347 ALDOAP04075 364 aaKnown RBP14.73□□□□□ -0.05
HDAC4-213ENST00000496347 C2P06681 752 aa14.73□□□□□ -0.05
HDAC4-213ENST00000496347 RNF224P0DH78 156 aa14.73□□□□□ -0.05
HDAC4-213ENST00000496347 MTHFD2P13995 350 aa14.73□□□□□ -0.05
HDAC4-213ENST00000496347 GMPRP36959 345 aa14.73□□□□□ -0.05
HDAC4-213ENST00000496347 TDGF1P3P51864 188 aa14.73□□□□□ -0.05
HDAC4-213ENST00000496347 PLA2G16P53816 162 aa14.73□□□□□ -0.05
HDAC4-213ENST00000496347 BTG2P78543 158 aa14.73□□□□□ -0.05
HDAC4-213ENST00000496347 TUBA3CQ13748 450 aa14.73□□□□□ -0.05
HDAC4-213ENST00000496347 SETDB1Q15047 1291 aa14.73□□□□□ -0.05
HDAC4-213ENST00000496347 ACAP2Q15057 778 aa14.73□□□□□ -0.05
HDAC4-213ENST00000496347 UAP1Q16222 522 aaPredicted RBP14.73□□□□□ -0.05
HDAC4-213ENST00000496347 TMEM35AQ53FP2 167 aa14.73□□□□□ -0.05
HDAC4-213ENST00000496347 ADNP2Q6IQ32 1131 aa14.73□□□□□ -0.05
HDAC4-213ENST00000496347 METTL2BQ6P1Q9 378 aaKnown RBP14.73□□□□□ -0.05
HDAC4-213ENST00000496347 ABHD17CQ6PCB6 329 aa14.73□□□□□ -0.05
HDAC4-213ENST00000496347 TUBA3EQ6PEY2 450 aa14.73□□□□□ -0.05
HDAC4-213ENST00000496347 ZNF595Q8IYB9 648 aa14.73□□□□□ -0.05
HDAC4-213ENST00000496347 LAS2Q8IYD9 372 aa14.73□□□□□ -0.05
HDAC4-213ENST00000496347 HORMAD2Q8N7B1 307 aa14.73□□□□□ -0.05
HDAC4-213ENST00000496347 MDS2Q8NDY4 140 aa14.73□□□□□ -0.05
HDAC4-213ENST00000496347 DNAJB8Q8NHS0 232 aa14.73□□□□□ -0.05
HDAC4-213ENST00000496347 KCTD4Q8WVF5 259 aa14.73□□□□□ -0.05
HDAC4-213ENST00000496347 ISL2Q96A47 359 aa14.73□□□□□ -0.05
HDAC4-213ENST00000496347 CDC42EP4Q9H3Q1 356 aaKnown RBP14.73□□□□□ -0.05
HDAC4-213ENST00000496347 TEX15Q9BXT5 2789 aa14.72□□□□□ -0.05
HDAC4-213ENST00000496347 A0A096LPK6 155 aa14.72□□□□□ -0.05
HDAC4-213ENST00000496347 A0A0G2JN53 185 aa14.72□□□□□ -0.05
HDAC4-213ENST00000496347 WIPF3A6NGB9 483 aa14.72□□□□□ -0.05
HDAC4-213ENST00000496347 GABRR3A8MPY1 467 aa14.72□□□□□ -0.05
HDAC4-213ENST00000496347 UGDHO60701 494 aa14.72□□□□□ -0.05
HDAC4-213ENST00000496347 SCELO95171 688 aa14.72□□□□□ -0.05
HDAC4-213ENST00000496347 KLHL2O95198 593 aa14.72□□□□□ -0.05
HDAC4-213ENST00000496347 ACSL3O95573 720 aa14.72□□□□□ -0.05
HDAC4-213ENST00000496347 INHBAP08476 426 aa14.72□□□□□ -0.05
HDAC4-213ENST00000496347 GFAPP14136 432 aa14.72□□□□□ -0.05
HDAC4-213ENST00000496347 EPB42P16452 691 aa14.72□□□□□ -0.05
HDAC4-213ENST00000496347 CERS1P27544 350 aa14.72□□□□□ -0.05
HDAC4-213ENST00000496347 ECHS1P30084 290 aa14.72□□□□□ -0.05
HDAC4-213ENST00000496347 MSH2P43246 934 aa14.72□□□□□ -0.05
HDAC4-213ENST00000496347 PIK3CGP48736 1102 aa14.72□□□□□ -0.05
HDAC4-213ENST00000496347 ALDH18A1P54886 795 aaKnown RBP14.72□□□□□ -0.05
HDAC4-213ENST00000496347 IRF9Q00978 393 aa14.72□□□□□ -0.05
HDAC4-213ENST00000496347 OR1C1Q15619 314 aa14.72□□□□□ -0.05
HDAC4-213ENST00000496347 C4orf17Q53FE4 359 aa14.72□□□□□ -0.05
HDAC4-213ENST00000496347 ZNF766Q5HY98 468 aa14.72□□□□□ -0.05
HDAC4-213ENST00000496347 FCRLBQ6BAA4 426 aa14.72□□□□□ -0.05
HDAC4-213ENST00000496347 GRHL2Q6ISB3 625 aa14.72□□□□□ -0.05
HDAC4-213ENST00000496347 MED27Q6P2C8 311 aa14.72□□□□□ -0.05
HDAC4-213ENST00000496347 CYP4X1Q8N118 509 aa14.72□□□□□ -0.05
HDAC4-213ENST00000496347 ARMC10Q8N2F6 343 aa14.72□□□□□ -0.05
HDAC4-213ENST00000496347 SLC44A1Q8WWI5 657 aa14.72□□□□□ -0.05
HDAC4-213ENST00000496347 NXNL1Q96CM4 212 aa14.72□□□□□ -0.05
HDAC4-213ENST00000496347 NPAS2Q99743 824 aa14.72□□□□□ -0.05
HDAC4-213ENST00000496347 MS4A8Q9BY19 250 aa14.72□□□□□ -0.05
HDAC4-213ENST00000496347 LYRM4Q9HD34 91 aa14.72□□□□□ -0.05
HDAC4-213ENST00000496347 NECTIN3Q9NQS3 549 aa14.72□□□□□ -0.05
HDAC4-213ENST00000496347 PLEKHB1Q9UF11 243 aaPredicted RBP14.72□□□□□ -0.05
HDAC4-213ENST00000496347 ADGRE2Q9UHX3 823 aa14.72□□□□□ -0.05
HDAC4-213ENST00000496347 DMGDHQ9UI17 866 aaKnown RBP14.72□□□□□ -0.05
HDAC4-213ENST00000496347 ZNF490Q9ULM2 529 aaPredicted RBP14.72□□□□□ -0.05
HDAC4-213ENST00000496347 DAPP1Q9UN19 280 aa14.72□□□□□ -0.05
HDAC4-213ENST00000496347 PPIEQ9UNP9 301 aaKnown RBP14.72□□□□□ -0.05
HDAC4-213ENST00000496347 IKBKGQ9Y6K9 419 aa14.72□□□□□ -0.05
HDAC4-213ENST00000496347 FAM227AF5H4B4 570 aa14.71□□□□□ -0.05
HDAC4-213ENST00000496347 KLK8O60259 260 aa14.71□□□□□ -0.05
HDAC4-213ENST00000496347 CNTFP26441 200 aa14.71□□□□□ -0.05
HDAC4-213ENST00000496347 TYK2P29597 1187 aa14.71□□□□□ -0.05
HDAC4-213ENST00000496347 MAGEA12P43365 314 aa14.71□□□□□ -0.05
HDAC4-213ENST00000496347 SERPINB9P50453 376 aa14.71□□□□□ -0.05
HDAC4-213ENST00000496347 LIM2P55344 173 aa14.71□□□□□ -0.05
HDAC4-213ENST00000496347 PER3P56645 1201 aa14.71□□□□□ -0.05
HDAC4-213ENST00000496347 SLC13A2Q13183 592 aa14.71□□□□□ -0.05
HDAC4-213ENST00000496347 RUNX2Q13950 521 aa14.71□□□□□ -0.05
HDAC4-213ENST00000496347 AMER2Q8N7J2 671 aa14.71□□□□□ -0.05
HDAC4-213ENST00000496347 FAM47BQ8NA70 645 aa14.71□□□□□ -0.05
HDAC4-213ENST00000496347 TMEM178AQ8NBL3 297 aa14.71□□□□□ -0.05
HDAC4-213ENST00000496347 NFAM1Q8NET5 270 aaPredicted RBP14.71□□□□□ -0.05
HDAC4-213ENST00000496347 B3GNT7Q8NFL0 401 aa14.71□□□□□ -0.05
HDAC4-213ENST00000496347 ZNF473Q8WTR7 871 aaKnown RBP14.71□□□□□ -0.05
HDAC4-213ENST00000496347 MRRFQ96E11 262 aaKnown RBP14.71□□□□□ -0.05
HDAC4-213ENST00000496347 SCMH1Q96GD3 660 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms