RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, humanhuman

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-223ENST00000496024 CDYL2Q8N8U2 506 aa9.26□□□□□ -0.93
CALD1-223ENST00000496024 FAM47BQ8NA70 645 aa9.26□□□□□ -0.93
CALD1-223ENST00000496024 LSM14AQ8ND56 463 aaKnown RBP9.26□□□□□ -0.93
CALD1-223ENST00000496024 FDCSPQ8NFU4 85 aa9.26□□□□□ -0.93
CALD1-223ENST00000496024 WDR20Q8TBZ3 569 aa9.26□□□□□ -0.93
CALD1-223ENST00000496024 RGMAQ96B86 450 aa9.26□□□□□ -0.93
CALD1-223ENST00000496024 CCDC126Q96EE4 140 aa9.26□□□□□ -0.93
CALD1-223ENST00000496024 L3HYPDHQ96EM0 354 aa9.26□□□□□ -0.93
CALD1-223ENST00000496024 VPS50Q96JG6 964 aa9.26□□□□□ -0.93
CALD1-223ENST00000496024 KCNC2Q96PR1 638 aa9.26□□□□□ -0.93
CALD1-223ENST00000496024 FAM111AQ96PZ2 611 aa9.26□□□□□ -0.93
CALD1-223ENST00000496024 FRG2BQ96QU4 278 aa9.26□□□□□ -0.93
CALD1-223ENST00000496024 SMC6Q96SB8 1091 aa9.26□□□□□ -0.93
CALD1-223ENST00000496024 HBEGFQ99075 208 aa9.26□□□□□ -0.93
CALD1-223ENST00000496024 CENPKQ9BS16 269 aa9.26□□□□□ -0.93
CALD1-223ENST00000496024 SLC25A23Q9BV35 468 aa9.26□□□□□ -0.93
CALD1-223ENST00000496024 C1QTNF3Q9BXJ4 246 aa9.26□□□□□ -0.93
CALD1-223ENST00000496024 SHCBP1LQ9BZQ2 653 aa9.26□□□□□ -0.93
CALD1-223ENST00000496024 ADNPQ9H2P0 1102 aa9.26□□□□□ -0.93
CALD1-223ENST00000496024 GSTO2Q9H4Y5 243 aa9.26□□□□□ -0.93
CALD1-223ENST00000496024 ELOVL6Q9H5J4 265 aa9.26□□□□□ -0.93
CALD1-223ENST00000496024 ATP13A2Q9NQ11 1180 aa9.26□□□□□ -0.93
CALD1-223ENST00000496024 PRDM7Q9NQW5 492 aa9.26□□□□□ -0.93
CALD1-223ENST00000496024 LANCL2Q9NS86 450 aa9.26□□□□□ -0.93
CALD1-223ENST00000496024 FARSBQ9NSD9 589 aaKnown RBP9.26□□□□□ -0.93
CALD1-223ENST00000496024 SLC17A7Q9P2U7 560 aa9.26□□□□□ -0.93
CALD1-223ENST00000496024 ADGRE2Q9UHX3 823 aa9.26□□□□□ -0.93
CALD1-223ENST00000496024 ZNF225Q9UK10 706 aa9.26□□□□□ -0.93
CALD1-223ENST00000496024 FBXW2Q9UKT8 454 aa9.26□□□□□ -0.93
CALD1-223ENST00000496024 PLLPQ9Y342 182 aa9.26□□□□□ -0.93
CALD1-223ENST00000496024 MYOCOSA0A1B0GUC4 107 aa9.25□□□□□ -0.93
CALD1-223ENST00000496024 CCDC151A5D8V7 595 aa9.25□□□□□ -0.93
CALD1-223ENST00000496024 A8MUA0 341 aa9.25□□□□□ -0.93
CALD1-223ENST00000496024 PLPP1O14494 284 aa9.25□□□□□ -0.93
CALD1-223ENST00000496024 PRMT3O60678 531 aa9.25□□□□□ -0.93
CALD1-223ENST00000496024 SEC24DO94855 1032 aaPredicted RBP9.25□□□□□ -0.93
CALD1-223ENST00000496024 ETHE1O95571 254 aa9.25□□□□□ -0.93
CALD1-223ENST00000496024 MLYCDO95822 493 aa9.25□□□□□ -0.93
CALD1-223ENST00000496024 PDYNP01213 254 aa9.25□□□□□ -0.93
CALD1-223ENST00000496024 CELA2AP08217 269 aa9.25□□□□□ -0.93
CALD1-223ENST00000496024 SFTPCP11686 197 aa9.25□□□□□ -0.93
CALD1-223ENST00000496024 COX6A1P12074 109 aa9.25□□□□□ -0.93
CALD1-223ENST00000496024 MAOAP21397 527 aa9.25□□□□□ -0.93
CALD1-223ENST00000496024 IL10P22301 178 aa9.25□□□□□ -0.93
CALD1-223ENST00000496024 JAK1P23458 1154 aa9.25□□□□□ -0.93
CALD1-223ENST00000496024 ATP5A1P25705 553 aaKnown RBP9.25□□□□□ -0.93
CALD1-223ENST00000496024 PTX3P26022 381 aaPredicted RBP9.25□□□□□ -0.93
CALD1-223ENST00000496024 HMOX2P30519 316 aa9.25□□□□□ -0.93
CALD1-223ENST00000496024 RHAGQ02094 409 aa9.25□□□□□ -0.93
CALD1-223ENST00000496024 ACTN3Q08043 901 aaPredicted RBP9.25□□□□□ -0.93
CALD1-223ENST00000496024 LCP2Q13094 533 aa9.25□□□□□ -0.93
CALD1-223ENST00000496024 NSDHLQ15738 373 aa9.25□□□□□ -0.93
CALD1-223ENST00000496024 LACTB2Q53H82 288 aaPredicted RBP9.25□□□□□ -0.93
CALD1-223ENST00000496024 BEND6Q5SZJ8 279 aaPredicted RBP9.25□□□□□ -0.93
CALD1-223ENST00000496024 OR4C11Q6IEV9 310 aa9.25□□□□□ -0.93
CALD1-223ENST00000496024 TMEM205Q6UW68 189 aa9.25□□□□□ -0.93
CALD1-223ENST00000496024 CPEB2Q7Z5Q1 589 aaKnown RBP9.25□□□□□ -0.93
CALD1-223ENST00000496024 ANKRD37Q7Z713 158 aa9.25□□□□□ -0.93
CALD1-223ENST00000496024 C10orf107Q8IVU9 208 aa9.25□□□□□ -0.93
CALD1-223ENST00000496024 ACOT4Q8N9L9 421 aa9.25□□□□□ -0.93
CALD1-223ENST00000496024 SRFBP1Q8NEF9 429 aaKnown RBP9.25□□□□□ -0.93
CALD1-223ENST00000496024 RDH11Q8TC12 318 aa9.25□□□□□ -0.93
CALD1-223ENST00000496024 METTL6Q8TCB7 284 aa9.25□□□□□ -0.93
CALD1-223ENST00000496024 TCP10LQ8TDR4 215 aa9.25□□□□□ -0.93
CALD1-223ENST00000496024 SELENOMQ8WWX9 145 aa9.25□□□□□ -0.93
CALD1-223ENST00000496024 NACC2Q96BF6 587 aa9.25□□□□□ -0.93
CALD1-223ENST00000496024 THOC3Q96J01 351 aaKnown RBP9.25□□□□□ -0.93
CALD1-223ENST00000496024 MAGEB10Q96LZ2 347 aaPredicted RBP9.25□□□□□ -0.93
CALD1-223ENST00000496024 PTCHD1Q96NR3 888 aa9.25□□□□□ -0.93
CALD1-223ENST00000496024 OR1F2PQ96R84 312 aa9.25□□□□□ -0.93
CALD1-223ENST00000496024 SERINC2Q96SA4 455 aa9.25□□□□□ -0.93
CALD1-223ENST00000496024 CSF3RQ99062 836 aa9.25□□□□□ -0.93
CALD1-223ENST00000496024 MAPKAP1Q9BPZ7 522 aa9.25□□□□□ -0.93
CALD1-223ENST00000496024 TBCDQ9BTW9 1192 aa9.25□□□□□ -0.93
CALD1-223ENST00000496024 MECRQ9BV79 373 aa9.25□□□□□ -0.93
CALD1-223ENST00000496024 NUDT9Q9BW91 350 aa9.25□□□□□ -0.93
CALD1-223ENST00000496024 NPLQ9BXD5 320 aaPredicted RBP9.25□□□□□ -0.93
CALD1-223ENST00000496024 SLC25A18Q9H1K4 315 aa9.25□□□□□ -0.93
CALD1-223ENST00000496024 MID1IP1Q9NPA3 183 aa9.25□□□□□ -0.93
CALD1-223ENST00000496024 OXSMQ9NWU1 459 aa9.25□□□□□ -0.93
CALD1-223ENST00000496024 MKS1Q9NXB0 559 aa9.25□□□□□ -0.93
CALD1-223ENST00000496024 GPR83Q9NYM4 423 aa9.25□□□□□ -0.93
CALD1-223ENST00000496024 TRPS1Q9UHF7 1281 aa9.25□□□□□ -0.93
CALD1-223ENST00000496024 MID2Q9UJV3 735 aa9.25□□□□□ -0.93
CALD1-223ENST00000496024 G3BP2Q9UN86 482 aaKnown RBP9.25□□□□□ -0.93
CALD1-223ENST00000496024 PRRC2CQ9Y520 2896 aaKnown RBP9.24□□□□□ -0.93
CALD1-223ENST00000496024 IGHV1-45A0A0A0MS14 117 aa9.24□□□□□ -0.93
CALD1-223ENST00000496024 FOXE1O00358 373 aaPredicted RBP9.24□□□□□ -0.93
CALD1-223ENST00000496024 MANBAO00462 879 aa9.24□□□□□ -0.93
CALD1-223ENST00000496024 EEDO75530 441 aaKnown RBP9.24□□□□□ -0.93
CALD1-223ENST00000496024 CRCPO75575 148 aa9.24□□□□□ -0.93
CALD1-223ENST00000496024 C1QL1O75973 258 aa9.24□□□□□ -0.93
CALD1-223ENST00000496024 HPP00738 406 aa9.24□□□□□ -0.93
CALD1-223ENST00000496024 GBAP04062 536 aa9.24□□□□□ -0.93
CALD1-223ENST00000496024 PDGFAP04085 211 aa9.24□□□□□ -0.93
CALD1-223ENST00000496024 UQCRHP07919 91 aa9.24□□□□□ -0.93
CALD1-223ENST00000496024 HIST1H1TP22492 207 aaPredicted RBP9.24□□□□□ -0.93
CALD1-223ENST00000496024 PGDP52209 483 aa9.24□□□□□ -0.93
CALD1-223ENST00000496024 HNRNPFP52597 415 aaKnown RBP9.24□□□□□ -0.93
CALD1-223ENST00000496024 LIM2P55344 173 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms