RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 AMER2Q8N7J2 671 aa12.89□□□□□ -0.35
GPC1-209ENST00000495100 FRMD1Q8N878 549 aa12.89□□□□□ -0.35
GPC1-209ENST00000495100 TERB1Q8NA31 727 aa12.89□□□□□ -0.35
GPC1-209ENST00000495100 SLC43A3Q8NBI5 491 aa12.89□□□□□ -0.35
GPC1-209ENST00000495100 CXorf40AQ8TE69 158 aa12.89□□□□□ -0.35
GPC1-209ENST00000495100 ATL1Q8WXF7 558 aa12.89□□□□□ -0.35
GPC1-209ENST00000495100 SMG7Q92540 1137 aaKnown RBP12.89□□□□□ -0.35
GPC1-209ENST00000495100 POLR2J2Q9GZM3 115 aaKnown RBP12.89□□□□□ -0.35
GPC1-209ENST00000495100 SLC6A16Q9GZN6 736 aa12.89□□□□□ -0.35
GPC1-209ENST00000495100 CWH43Q9H720 699 aa12.89□□□□□ -0.35
GPC1-209ENST00000495100 GORASP2Q9H8Y8 452 aa12.89□□□□□ -0.35
GPC1-209ENST00000495100 IL21Q9HBE4 155 aa12.89□□□□□ -0.35
GPC1-209ENST00000495100 KLHL1Q9NR64 748 aa12.89□□□□□ -0.35
GPC1-209ENST00000495100 DEC1Q9P2X7 70 aa12.89□□□□□ -0.35
GPC1-209ENST00000495100 COMMD3Q9UBI1 195 aa12.89□□□□□ -0.35
GPC1-209ENST00000495100 MED26O95402 600 aa12.88□□□□□ -0.35
GPC1-209ENST00000495100 TIMP2P16035 220 aa12.88□□□□□ -0.35
GPC1-209ENST00000495100 GRIK2Q13002 908 aa12.88□□□□□ -0.35
GPC1-209ENST00000495100 MAD2L1BPQ15013 274 aaPredicted RBP12.88□□□□□ -0.35
GPC1-209ENST00000495100 TJAP1Q5JTD0 557 aa12.88□□□□□ -0.35
GPC1-209ENST00000495100 PARS2Q7L3T8 475 aaKnown RBP12.88□□□□□ -0.35
GPC1-209ENST00000495100 SLC39A11Q8N1S5 342 aa12.88□□□□□ -0.35
GPC1-209ENST00000495100 SLC6A17Q9H1V8 727 aa12.88□□□□□ -0.35
GPC1-209ENST00000495100 EHD1Q9H4M9 534 aa12.88□□□□□ -0.35
GPC1-209ENST00000495100 IL37Q9NZH6 218 aa12.88□□□□□ -0.35
GPC1-209ENST00000495100 RIMKLBQ9ULI2 386 aa12.88□□□□□ -0.35
GPC1-209ENST00000495100 A0A1W2PPK0 400 aa12.88□□□□□ -0.35
GPC1-209ENST00000495100 TMCC2O75069 709 aa12.88□□□□□ -0.35
GPC1-209ENST00000495100 PAX3P23760 479 aa12.88□□□□□ -0.35
GPC1-209ENST00000495100 VIPR1P32241 457 aa12.88□□□□□ -0.35
GPC1-209ENST00000495100 TOP3AQ13472 1001 aaPredicted RBP12.88□□□□□ -0.35
GPC1-209ENST00000495100 TMEM215Q68D42 235 aa12.88□□□□□ -0.35
GPC1-209ENST00000495100 GALNT7Q86SF2 657 aa12.88□□□□□ -0.35
GPC1-209ENST00000495100 LHFPL3Q86UP9 236 aa12.88□□□□□ -0.35
GPC1-209ENST00000495100 IQCHQ86VS3 1027 aa12.88□□□□□ -0.35
GPC1-209ENST00000495100 ZNF420Q8TAQ5 688 aaPredicted RBP12.88□□□□□ -0.35
GPC1-209ENST00000495100 TADA1Q96BN2 335 aa12.88□□□□□ -0.35
GPC1-209ENST00000495100 RBCK1Q9BYM8 510 aa12.88□□□□□ -0.35
GPC1-209ENST00000495100 POLR2J3Q9H1A7 115 aaKnown RBP12.88□□□□□ -0.35
GPC1-209ENST00000495100 SOCS5O75159 536 aa12.88□□□□□ -0.35
GPC1-209ENST00000495100 CCNB2O95067 398 aa12.88□□□□□ -0.35
GPC1-209ENST00000495100 RAB33AQ14088 237 aa12.88□□□□□ -0.35
GPC1-209ENST00000495100 KIAA0040Q15053 153 aa12.88□□□□□ -0.35
GPC1-209ENST00000495100 CCDC149Q6ZUS6 474 aa12.88□□□□□ -0.35
GPC1-209ENST00000495100 SLC29A3Q9BZD2 475 aa12.88□□□□□ -0.35
GPC1-209ENST00000495100 ACOT13Q9NPJ3 140 aa12.88□□□□□ -0.35
GPC1-209ENST00000495100 CLEC2DQ9UHP7 191 aa12.88□□□□□ -0.35
GPC1-209ENST00000495100 ANGPT4Q9Y264 503 aa12.88□□□□□ -0.35
GPC1-209ENST00000495100 ERGIC3Q9Y282 383 aa12.88□□□□□ -0.35
GPC1-209ENST00000495100 CA5BQ9Y2D0 317 aa12.88□□□□□ -0.35
GPC1-209ENST00000495100 SCN10AQ9Y5Y9 1956 aa12.88□□□□□ -0.35
GPC1-209ENST00000495100 IGLON5A6NGN9 336 aa12.87□□□□□ -0.35
GPC1-209ENST00000495100 SCAMP2O15127 329 aaKnown RBP12.87□□□□□ -0.35
GPC1-209ENST00000495100 KLK8O60259 260 aa12.87□□□□□ -0.35
GPC1-209ENST00000495100 SLC35G4P0C7Q5 338 aa12.87□□□□□ -0.35
GPC1-209ENST00000495100 LAG3P18627 525 aa12.87□□□□□ -0.35
GPC1-209ENST00000495100 CD9P21926 228 aa12.87□□□□□ -0.35
GPC1-209ENST00000495100 TIA1P31483 386 aaKnown RBP eCLIP12.87□□□□□ -0.35
GPC1-209ENST00000495100 OLR1P78380 273 aa12.87□□□□□ -0.35
GPC1-209ENST00000495100 ELP6Q0PNE2 266 aa12.87□□□□□ -0.35
GPC1-209ENST00000495100 ZNF542PQ5EBM4 170 aa12.87□□□□□ -0.35
GPC1-209ENST00000495100 PRAMEF14Q5SWL7 426 aa12.87□□□□□ -0.35
GPC1-209ENST00000495100 PRAMEF13Q5VWM6 474 aa12.87□□□□□ -0.35
GPC1-209ENST00000495100 ZNF761Q86XN6 746 aaPredicted RBP12.87□□□□□ -0.35
GPC1-209ENST00000495100 ENTHD1Q8IYW4 607 aa12.87□□□□□ -0.35
GPC1-209ENST00000495100 OR14C36Q8NHC7 312 aa12.87□□□□□ -0.35
GPC1-209ENST00000495100 MYDGFQ969H8 173 aa12.87□□□□□ -0.35
GPC1-209ENST00000495100 DOHHQ9BU89 302 aa12.87□□□□□ -0.35
GPC1-209ENST00000495100 FNDC11Q9BVV2 318 aa12.87□□□□□ -0.35
GPC1-209ENST00000495100 TMEM245Q9H330 911 aa12.87□□□□□ -0.35
GPC1-209ENST00000495100 CLN6Q9NWW5 311 aa12.87□□□□□ -0.35
GPC1-209ENST00000495100 DPP7Q9UHL4 492 aa12.87□□□□□ -0.35
GPC1-209ENST00000495100 PLEKHM1Q9Y4G2 1056 aa12.87□□□□□ -0.35
GPC1-209ENST00000495100 TRPM6Q9BX84 2022 aa12.87□□□□□ -0.35
GPC1-209ENST00000495100 TSPAN19P0C672 248 aa12.87□□□□□ -0.35
GPC1-209ENST00000495100 ITGB8P26012 769 aa12.87□□□□□ -0.35
GPC1-209ENST00000495100 SOX6P35712 828 aa12.87□□□□□ -0.35
GPC1-209ENST00000495100 ZNF763Q0D2J5 394 aa12.87□□□□□ -0.35
GPC1-209ENST00000495100 ZC3H12BQ5HYM0 836 aaKnown RBP12.87□□□□□ -0.35
GPC1-209ENST00000495100 SHQ1Q6PI26 577 aaKnown RBP12.87□□□□□ -0.35
GPC1-209ENST00000495100 USP30Q70CQ3 517 aa12.87□□□□□ -0.35
GPC1-209ENST00000495100 FAM9CQ8IZT9 166 aa12.87□□□□□ -0.35
GPC1-209ENST00000495100 PLA2G15Q8NCC3 412 aa12.87□□□□□ -0.35
GPC1-209ENST00000495100 BTN2A2Q8WVV5 523 aa12.87□□□□□ -0.35
GPC1-209ENST00000495100 ALG14Q96F25 216 aa12.87□□□□□ -0.35
GPC1-209ENST00000495100 TMEM175Q9BSA9 504 aa12.87□□□□□ -0.35
GPC1-209ENST00000495100 ENPP5Q9UJA9 477 aa12.87□□□□□ -0.35
GPC1-209ENST00000495100 OR51B4Q9Y5P0 310 aa12.87□□□□□ -0.35
GPC1-209ENST00000495100 PMF1-BGLAPU3KQ54 211 aa12.87□□□□□ -0.35
GPC1-209ENST00000495100 TRIOBPQ9H2D6 2365 aa12.87□□□□□ -0.35
GPC1-209ENST00000495100 TBC1D3DA0A087WVF3 549 aa12.87□□□□□ -0.35
GPC1-209ENST00000495100 TBC1D3IA0A087WXS9 549 aa12.87□□□□□ -0.35
GPC1-209ENST00000495100 TBC1D3EA0A087X179 549 aa12.87□□□□□ -0.35
GPC1-209ENST00000495100 TBC1D3KA0A087X1G2 549 aa12.87□□□□□ -0.35
GPC1-209ENST00000495100 TBC1D3FA6NER0 549 aaPredicted RBP12.87□□□□□ -0.35
GPC1-209ENST00000495100 TBC1D3LB9A6J9 549 aa12.87□□□□□ -0.35
GPC1-209ENST00000495100 ERI3O43414 337 aaKnown RBP12.87□□□□□ -0.35
GPC1-209ENST00000495100 ASNA1O43681 348 aa12.87□□□□□ -0.35
GPC1-209ENST00000495100 KIAA0513O60268 411 aa12.87□□□□□ -0.35
GPC1-209ENST00000495100 ABLIM3O94929 683 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms