RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 HIST2H2ACQ16777 129 aaPredicted RBP8.98□□□□□ -0.97
MSH5-218ENST00000494646 SP5Q6BEB4 398 aaPredicted RBP8.98□□□□□ -0.97
MSH5-218ENST00000494646 HIST2H2AA3Q6FI13 130 aa8.98□□□□□ -0.97
MSH5-218ENST00000494646 SLC25A25Q6KCM7 469 aa8.98□□□□□ -0.97
MSH5-218ENST00000494646 VN1R5Q7Z5H4 357 aa8.98□□□□□ -0.97
MSH5-218ENST00000494646 ISCA2Q86U28 154 aa8.98□□□□□ -0.97
MSH5-218ENST00000494646 TCAIMQ8N3R3 496 aa8.98□□□□□ -0.97
MSH5-218ENST00000494646 SLC5A8Q8N695 610 aa8.98□□□□□ -0.97
MSH5-218ENST00000494646 FAM47BQ8NA70 645 aa8.98□□□□□ -0.97
MSH5-218ENST00000494646 MDS2Q8NDY4 140 aa8.98□□□□□ -0.97
MSH5-218ENST00000494646 ARMC2Q8NEN0 867 aa8.98□□□□□ -0.97
MSH5-218ENST00000494646 NFAM1Q8NET5 270 aaPredicted RBP8.98□□□□□ -0.97
MSH5-218ENST00000494646 GAL3ST3Q96A11 431 aa8.98□□□□□ -0.97
MSH5-218ENST00000494646 KIAA1191Q96A73 305 aa8.98□□□□□ -0.97
MSH5-218ENST00000494646 NXNL1Q96CM4 212 aa8.98□□□□□ -0.97
MSH5-218ENST00000494646 UBXN10Q96LJ8 280 aa8.98□□□□□ -0.97
MSH5-218ENST00000494646 CD244Q9BZW8 370 aa8.98□□□□□ -0.97
MSH5-218ENST00000494646 REXO4Q9GZR2 422 aaKnown RBP8.98□□□□□ -0.97
MSH5-218ENST00000494646 RAB17Q9H0T7 212 aa8.98□□□□□ -0.97
MSH5-218ENST00000494646 CNOT10Q9H9A5 744 aaKnown RBP8.98□□□□□ -0.97
MSH5-218ENST00000494646 LIN28AQ9H9Z2 209 aaKnown RBP8.98□□□□□ -0.97
MSH5-218ENST00000494646 CLK4Q9HAZ1 481 aaKnown RBP8.98□□□□□ -0.97
MSH5-218ENST00000494646 PRTFDC1Q9NRG1 225 aa8.98□□□□□ -0.97
MSH5-218ENST00000494646 GPRC5BQ9NZH0 403 aa8.98□□□□□ -0.97
MSH5-218ENST00000494646 PTBP2Q9UKA9 531 aaKnown RBP8.98□□□□□ -0.97
MSH5-218ENST00000494646 FBXW2Q9UKT8 454 aa8.98□□□□□ -0.97
MSH5-218ENST00000494646 SAGE2PA6NJ88 616 aa8.97□□□□□ -0.97
MSH5-218ENST00000494646 SUPT3HB4E1H0 165 aa8.97□□□□□ -0.97
MSH5-218ENST00000494646 NPIPA5E9PKD4 350 aa8.97□□□□□ -0.97
MSH5-218ENST00000494646 TGFBR3LH3BV60 316 aa8.97□□□□□ -0.97
MSH5-218ENST00000494646 UBXN8O00124 270 aa8.97□□□□□ -0.97
MSH5-218ENST00000494646 RTCAO00442 366 aaKnown RBP8.97□□□□□ -0.97
MSH5-218ENST00000494646 CCL21O00585 134 aa8.97□□□□□ -0.97
MSH5-218ENST00000494646 B3GALT2O43825 422 aa8.97□□□□□ -0.97
MSH5-218ENST00000494646 SUPT3HO75486 399 aa8.97□□□□□ -0.97
MSH5-218ENST00000494646 CLEC3AO75596 197 aa8.97□□□□□ -0.97
MSH5-218ENST00000494646 TGFB1P01137 390 aa8.97□□□□□ -0.97
MSH5-218ENST00000494646 GSTA2P09210 222 aa8.97□□□□□ -0.97
MSH5-218ENST00000494646 PCNAP12004 261 aa8.97□□□□□ -0.97
MSH5-218ENST00000494646 EPORP19235 508 aa8.97□□□□□ -0.97
MSH5-218ENST00000494646 TFEBP19484 476 aa8.97□□□□□ -0.97
MSH5-218ENST00000494646 CD22P20273 847 aa8.97□□□□□ -0.97
MSH5-218ENST00000494646 CERS1P27544 350 aa8.97□□□□□ -0.97
MSH5-218ENST00000494646 MSH2P43246 934 aa8.97□□□□□ -0.97
MSH5-218ENST00000494646 LIM2P55344 173 aa8.97□□□□□ -0.97
MSH5-218ENST00000494646 RAB38P57729 211 aa8.97□□□□□ -0.97
MSH5-218ENST00000494646 MLF1P58340 268 aa8.97□□□□□ -0.97
MSH5-218ENST00000494646 IRF9Q00978 393 aa8.97□□□□□ -0.97
MSH5-218ENST00000494646 ALDH6A1Q02252 535 aaKnown RBP8.97□□□□□ -0.97
MSH5-218ENST00000494646 ILF2Q12905 390 aaKnown RBP8.97□□□□□ -0.97
MSH5-218ENST00000494646 SLC13A2Q13183 592 aa8.97□□□□□ -0.97
MSH5-218ENST00000494646 BMPR2Q13873 1038 aa8.97□□□□□ -0.97
MSH5-218ENST00000494646 ZKSCAN8Q15776 578 aaPredicted RBP8.97□□□□□ -0.97
MSH5-218ENST00000494646 UAP1Q16222 522 aaPredicted RBP8.97□□□□□ -0.97
MSH5-218ENST00000494646 PDK4Q16654 411 aa8.97□□□□□ -0.97
MSH5-218ENST00000494646 MROH9Q5TGP6 573 aa8.97□□□□□ -0.97
MSH5-218ENST00000494646 TRIM40Q6P9F5 258 aa8.97□□□□□ -0.97
MSH5-218ENST00000494646 ABHD17CQ6PCB6 329 aa8.97□□□□□ -0.97
MSH5-218ENST00000494646 DNAJC14Q6Y2X3 702 aaPredicted RBP8.97□□□□□ -0.97
MSH5-218ENST00000494646 C16orf47Q6ZP98 133 aaPredicted RBP8.97□□□□□ -0.97
MSH5-218ENST00000494646 CLNKQ7Z7G1 428 aa8.97□□□□□ -0.97
MSH5-218ENST00000494646 TBC1D1Q86TI0 1168 aaPredicted RBP8.97□□□□□ -0.97
MSH5-218ENST00000494646 RNF175Q8N4F7 328 aa8.97□□□□□ -0.97
MSH5-218ENST00000494646 TTLQ8NG68 377 aa8.97□□□□□ -0.97
MSH5-218ENST00000494646 OR2L5Q8NG80 312 aa8.97□□□□□ -0.97
MSH5-218ENST00000494646 STAG3L4Q8TBR4 150 aa8.97□□□□□ -0.97
MSH5-218ENST00000494646 RELTQ969Z4 430 aa8.97□□□□□ -0.97
MSH5-218ENST00000494646 PTCD3Q96EY7 689 aaKnown RBP8.97□□□□□ -0.97
MSH5-218ENST00000494646 SCMH1Q96GD3 660 aa8.97□□□□□ -0.97
MSH5-218ENST00000494646 QRFPRQ96P65 431 aa8.97□□□□□ -0.97
MSH5-218ENST00000494646 CSF3RQ99062 836 aa8.97□□□□□ -0.97
MSH5-218ENST00000494646 NPLQ9BXD5 320 aaPredicted RBP8.97□□□□□ -0.97
MSH5-218ENST00000494646 NMRAL1Q9HBL8 299 aa8.97□□□□□ -0.97
MSH5-218ENST00000494646 PRDM7Q9NQW5 492 aa8.97□□□□□ -0.97
MSH5-218ENST00000494646 NPIPA1Q9UND3 350 aa8.97□□□□□ -0.97
MSH5-218ENST00000494646 IGKV3D-11A0A0A0MRZ8 115 aa8.96□□□□□ -0.98
MSH5-218ENST00000494646 TRBV11-1A0A0K0K1C0 115 aa8.96□□□□□ -0.98
MSH5-218ENST00000494646 SAP18O00422 153 aaKnown RBP8.96□□□□□ -0.98
MSH5-218ENST00000494646 CLDN4O14493 209 aa8.96□□□□□ -0.98
MSH5-218ENST00000494646 PRKNO60260 465 aaPredicted RBP8.96□□□□□ -0.98
MSH5-218ENST00000494646 URI1O94763 535 aaPredicted RBP8.96□□□□□ -0.98
MSH5-218ENST00000494646 IFNA16P05015 189 aa8.96□□□□□ -0.98
MSH5-218ENST00000494646 C2P06681 752 aa8.96□□□□□ -0.98
MSH5-218ENST00000494646 SLC35E2BP0CK96 405 aa8.96□□□□□ -0.98
MSH5-218ENST00000494646 TNNI3P19429 210 aa8.96□□□□□ -0.98
MSH5-218ENST00000494646 CRABP2P29373 138 aa8.96□□□□□ -0.98
MSH5-218ENST00000494646 CYB561P49447 251 aa8.96□□□□□ -0.98
MSH5-218ENST00000494646 CLCN2P51788 898 aa8.96□□□□□ -0.98
MSH5-218ENST00000494646 GUCY2DQ02846 1103 aa8.96□□□□□ -0.98
MSH5-218ENST00000494646 RBPJQ06330 500 aa8.96□□□□□ -0.98
MSH5-218ENST00000494646 LAPTM5Q13571 262 aa8.96□□□□□ -0.98
MSH5-218ENST00000494646 CDKL4Q5MAI5 379 aa8.96□□□□□ -0.98
MSH5-218ENST00000494646 UBAP2Q5T6F2 1119 aaKnown RBP8.96□□□□□ -0.98
MSH5-218ENST00000494646 UBE3DQ7Z6J8 389 aa8.96□□□□□ -0.98
MSH5-218ENST00000494646 ZNF227Q86WZ6 799 aa8.96□□□□□ -0.98
MSH5-218ENST00000494646 CPSF7Q8N684 471 aaKnown RBP8.96□□□□□ -0.98
MSH5-218ENST00000494646 TEX9Q8N6V9 391 aa8.96□□□□□ -0.98
MSH5-218ENST00000494646 HORMAD2Q8N7B1 307 aa8.96□□□□□ -0.98
MSH5-218ENST00000494646 TMEM178AQ8NBL3 297 aa8.96□□□□□ -0.98
MSH5-218ENST00000494646 PDPRQ8NCN5 879 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms