RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 LIPJQ5W064 366 aa8.27□□□□□ -1.09
ITGB1-217ENST00000494395 GTF2H2CQ6P1K8 395 aa8.27□□□□□ -1.09
ITGB1-217ENST00000494395 RPS27LQ71UM5 84 aaKnown RBP8.27□□□□□ -1.09
ITGB1-217ENST00000494395 UBE3DQ7Z6J8 389 aa8.27□□□□□ -1.09
ITGB1-217ENST00000494395 PRSS58Q8IYP2 241 aa8.27□□□□□ -1.09
ITGB1-217ENST00000494395 OR7G3Q8NG95 312 aa8.27□□□□□ -1.09
ITGB1-217ENST00000494395 OR5T3Q8NGG3 340 aa8.27□□□□□ -1.09
ITGB1-217ENST00000494395 OR51Q1Q8NH59 317 aa8.27□□□□□ -1.09
ITGB1-217ENST00000494395 OR2W6PQ8NHA6 318 aa8.27□□□□□ -1.09
ITGB1-217ENST00000494395 C9orf43Q8TAL5 461 aaPredicted RBP8.27□□□□□ -1.09
ITGB1-217ENST00000494395 GAL3ST3Q96A11 431 aa8.27□□□□□ -1.09
ITGB1-217ENST00000494395 MS4A6EQ96DS6 147 aa8.27□□□□□ -1.09
ITGB1-217ENST00000494395 SCYL1Q96KG9 808 aa8.27□□□□□ -1.09
ITGB1-217ENST00000494395 NTMT1Q9BV86 223 aa8.27□□□□□ -1.09
ITGB1-217ENST00000494395 MS4A8Q9BY19 250 aa8.27□□□□□ -1.09
ITGB1-217ENST00000494395 BHLHE41Q9C0J9 482 aaPredicted RBP8.27□□□□□ -1.09
ITGB1-217ENST00000494395 CLK4Q9HAZ1 481 aaKnown RBP8.27□□□□□ -1.09
ITGB1-217ENST00000494395 LANCL2Q9NS86 450 aa8.27□□□□□ -1.09
ITGB1-217ENST00000494395 HCN3Q9P1Z3 774 aa8.27□□□□□ -1.09
ITGB1-217ENST00000494395 FBXL4Q9UKA2 621 aa8.27□□□□□ -1.09
ITGB1-217ENST00000494395 EMCNQ9ULC0 261 aa8.27□□□□□ -1.09
ITGB1-217ENST00000494395 TP53TG5Q9Y2B4 290 aa8.27□□□□□ -1.09
ITGB1-217ENST00000494395 TNPO3Q9Y5L0 923 aaKnown RBP8.27□□□□□ -1.09
ITGB1-217ENST00000494395 CPAMD8Q8IZJ3 1885 aa8.27□□□□□ -1.09
ITGB1-217ENST00000494395 A0A1B0GTL3 188 aa8.26□□□□□ -1.09
ITGB1-217ENST00000494395 URADA6NGE7 173 aa8.26□□□□□ -1.09
ITGB1-217ENST00000494395 ANKDD1BA6NHY2 528 aa8.26□□□□□ -1.09
ITGB1-217ENST00000494395 ADARB2-AS1A8MUL3 147 aa8.26□□□□□ -1.09
ITGB1-217ENST00000494395 H0YIV9 168 aa8.26□□□□□ -1.09
ITGB1-217ENST00000494395 PCDH17O14917 1159 aa8.26□□□□□ -1.09
ITGB1-217ENST00000494395 ERI3O43414 337 aaKnown RBP8.26□□□□□ -1.09
ITGB1-217ENST00000494395 CHST10O43529 356 aa8.26□□□□□ -1.09
ITGB1-217ENST00000494395 DLX3O60479 287 aa8.26□□□□□ -1.09
ITGB1-217ENST00000494395 ALOX12BO75342 701 aa8.26□□□□□ -1.09
ITGB1-217ENST00000494395 SCELO95171 688 aa8.26□□□□□ -1.09
ITGB1-217ENST00000494395 PROCP04070 461 aa8.26□□□□□ -1.09
ITGB1-217ENST00000494395 SERPIND1P05546 499 aa8.26□□□□□ -1.09
ITGB1-217ENST00000494395 COX6A1P12074 109 aa8.26□□□□□ -1.09
ITGB1-217ENST00000494395 NR1D1P20393 614 aa8.26□□□□□ -1.09
ITGB1-217ENST00000494395 IL10P22301 178 aa8.26□□□□□ -1.09
ITGB1-217ENST00000494395 EMP2P54851 167 aa8.26□□□□□ -1.09
ITGB1-217ENST00000494395 RAB8AP61006 207 aa8.26□□□□□ -1.09
ITGB1-217ENST00000494395 STXBP1P61764 594 aaKnown RBP8.26□□□□□ -1.09
ITGB1-217ENST00000494395 RHAGQ02094 409 aa8.26□□□□□ -1.09
ITGB1-217ENST00000494395 SLC18A2Q05940 514 aa8.26□□□□□ -1.09
ITGB1-217ENST00000494395 Q0VFX4 171 aa8.26□□□□□ -1.09
ITGB1-217ENST00000494395 RUNX2Q13950 521 aa8.26□□□□□ -1.09
ITGB1-217ENST00000494395 PCOLCEQ15113 449 aa8.26□□□□□ -1.09
ITGB1-217ENST00000494395 RBBP7Q16576 425 aa8.26□□□□□ -1.09
ITGB1-217ENST00000494395 SPRED3Q2MJR0 410 aa8.26□□□□□ -1.09
ITGB1-217ENST00000494395 TUBB8Q3ZCM7 444 aa8.26□□□□□ -1.09
ITGB1-217ENST00000494395 PAGE2BQ5JRK9 111 aa8.26□□□□□ -1.09
ITGB1-217ENST00000494395 RNFT1Q5M7Z0 435 aa8.26□□□□□ -1.09
ITGB1-217ENST00000494395 NIPAL1Q6NVV3 410 aa8.26□□□□□ -1.09
ITGB1-217ENST00000494395 MED27Q6P2C8 311 aa8.26□□□□□ -1.09
ITGB1-217ENST00000494395 ABHD17CQ6PCB6 329 aa8.26□□□□□ -1.09
ITGB1-217ENST00000494395 ABHD13Q7L211 337 aa8.26□□□□□ -1.09
ITGB1-217ENST00000494395 CA13Q8N1Q1 262 aa8.26□□□□□ -1.09
ITGB1-217ENST00000494395 RIBC1Q8N443 379 aaPredicted RBP8.26□□□□□ -1.09
ITGB1-217ENST00000494395 FDCSPQ8NFU4 85 aa8.26□□□□□ -1.09
ITGB1-217ENST00000494395 OR2L5Q8NG80 312 aa8.26□□□□□ -1.09
ITGB1-217ENST00000494395 OR52B6Q8NGF0 335 aa8.26□□□□□ -1.09
ITGB1-217ENST00000494395 WDR20Q8TBZ3 569 aa8.26□□□□□ -1.09
ITGB1-217ENST00000494395 ZNF483Q8TF39 744 aaPredicted RBP8.26□□□□□ -1.09
ITGB1-217ENST00000494395 C8orf44Q96CB5 159 aa8.26□□□□□ -1.09
ITGB1-217ENST00000494395 PEX11GQ96HA9 241 aa8.26□□□□□ -1.09
ITGB1-217ENST00000494395 FER1L6-AS2Q96M78 137 aa8.26□□□□□ -1.09
ITGB1-217ENST00000494395 OR1F2PQ96R84 312 aa8.26□□□□□ -1.09
ITGB1-217ENST00000494395 SMAD5Q99717 465 aaKnown RBP8.26□□□□□ -1.09
ITGB1-217ENST00000494395 MDFIQ99750 246 aa8.26□□□□□ -1.09
ITGB1-217ENST00000494395 NUDT9Q9BW91 350 aa8.26□□□□□ -1.09
ITGB1-217ENST00000494395 ZNF552Q9H707 407 aaPredicted RBP8.26□□□□□ -1.09
ITGB1-217ENST00000494395 IPPKQ9H8X2 491 aa8.26□□□□□ -1.09
ITGB1-217ENST00000494395 PRDM7Q9NQW5 492 aa8.26□□□□□ -1.09
ITGB1-217ENST00000494395 ACSS2Q9NR19 701 aa8.26□□□□□ -1.09
ITGB1-217ENST00000494395 MKS1Q9NXB0 559 aa8.26□□□□□ -1.09
ITGB1-217ENST00000494395 LGALS13Q9UHV8 139 aa8.26□□□□□ -1.09
ITGB1-217ENST00000494395 ZNF225Q9UK10 706 aa8.26□□□□□ -1.09
ITGB1-217ENST00000494395 MKL2Q9ULH7 1088 aa8.26□□□□□ -1.09
ITGB1-217ENST00000494395 PPT2Q9UMR5 302 aa8.26□□□□□ -1.09
ITGB1-217ENST00000494395 A0A096LPE4 126 aa8.25□□□□□ -1.09
ITGB1-217ENST00000494395 IGKV3D-11A0A0A0MRZ8 115 aa8.25□□□□□ -1.09
ITGB1-217ENST00000494395 IGHV1-45A0A0A0MS14 117 aa8.25□□□□□ -1.09
ITGB1-217ENST00000494395 A0A0G2JN53 185 aa8.25□□□□□ -1.09
ITGB1-217ENST00000494395 A0A1W2PPZ6 126 aa8.25□□□□□ -1.09
ITGB1-217ENST00000494395 OR2W5A6NFC9 320 aa8.25□□□□□ -1.09
ITGB1-217ENST00000494395 SMIM23A6NLE4 172 aa8.25□□□□□ -1.09
ITGB1-217ENST00000494395 G3V2L1 256 aa8.25□□□□□ -1.09
ITGB1-217ENST00000494395 PEX12O00623 359 aa8.25□□□□□ -1.09
ITGB1-217ENST00000494395 PPP6CO00743 305 aa8.25□□□□□ -1.09
ITGB1-217ENST00000494395 PLIN3O60664 434 aa8.25□□□□□ -1.09
ITGB1-217ENST00000494395 SMIM24O75264 130 aa8.25□□□□□ -1.09
ITGB1-217ENST00000494395 GLRA3O75311 464 aa8.25□□□□□ -1.09
ITGB1-217ENST00000494395 SMNDC1O75940 238 aaKnown RBP eCLIP8.25□□□□□ -1.09
ITGB1-217ENST00000494395 HPP00738 406 aa8.25□□□□□ -1.09
ITGB1-217ENST00000494395 HEXBP07686 556 aa8.25□□□□□ -1.09
ITGB1-217ENST00000494395 FHP07954 510 aa8.25□□□□□ -1.09
ITGB1-217ENST00000494395 ATP5F1P24539 256 aaPredicted RBP8.25□□□□□ -1.09
ITGB1-217ENST00000494395 SERPINB1P30740 379 aa8.25□□□□□ -1.09
ITGB1-217ENST00000494395 DEKP35659 375 aaKnown RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms