RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 BAZ2AQ9UIF9 1905 aaKnown RBP18.46■□□□□ 0.55
COL27A1-207ENST00000494090 PHRF1Q9P1Y6 1649 aaKnown RBP18.46■□□□□ 0.55
COL27A1-207ENST00000494090 COCHO43405 550 aa18.46■□□□□ 0.55
COL27A1-207ENST00000494090 AMIGO3Q86WK7 504 aa18.46■□□□□ 0.55
COL27A1-207ENST00000494090 NRROSQ86YC3 692 aa18.46■□□□□ 0.55
COL27A1-207ENST00000494090 SLC15A3Q8IY34 581 aa18.46■□□□□ 0.55
COL27A1-207ENST00000494090 ZNF101Q8IZC7 436 aa18.46■□□□□ 0.55
COL27A1-207ENST00000494090 SFXN1Q9H9B4 322 aa18.46■□□□□ 0.55
COL27A1-207ENST00000494090 CMAHPQ9Y471 501 aa18.46■□□□□ 0.55
COL27A1-207ENST00000494090 HSD3B1P14060 373 aa18.45■□□□□ 0.54
COL27A1-207ENST00000494090 HSD3B2P26439 372 aa18.45■□□□□ 0.54
COL27A1-207ENST00000494090 PHC1P78364 1004 aa18.45■□□□□ 0.54
COL27A1-207ENST00000494090 RAB39AQ14964 217 aa18.45■□□□□ 0.54
COL27A1-207ENST00000494090 EIF4HQ15056 248 aaKnown RBP18.45■□□□□ 0.54
COL27A1-207ENST00000494090 PRRT3Q5FWE3 981 aa18.45■□□□□ 0.54
COL27A1-207ENST00000494090 ANKRD26P1Q6NSI1 321 aa18.45■□□□□ 0.54
COL27A1-207ENST00000494090 ASRGL1Q7L266 308 aa18.45■□□□□ 0.54
COL27A1-207ENST00000494090 ZNF598Q86UK7 904 aaKnown RBP18.45■□□□□ 0.54
COL27A1-207ENST00000494090 OR8H3Q8N146 312 aa18.45■□□□□ 0.54
COL27A1-207ENST00000494090 OR4K14Q8NGD5 310 aa18.45■□□□□ 0.54
COL27A1-207ENST00000494090 TMEM98Q9Y2Y6 226 aa18.45■□□□□ 0.54
COL27A1-207ENST00000494090 KDM3BQ7LBC6 1761 aa18.45■□□□□ 0.54
COL27A1-207ENST00000494090 DENRO43583 198 aaKnown RBP18.45■□□□□ 0.54
COL27A1-207ENST00000494090 XPNPEP2O43895 674 aa18.45■□□□□ 0.54
COL27A1-207ENST00000494090 GBAP04062 536 aa18.45■□□□□ 0.54
COL27A1-207ENST00000494090 FDXRP22570 491 aa18.45■□□□□ 0.54
COL27A1-207ENST00000494090 ZNF252P-AS1Q0IIN9 211 aa18.45■□□□□ 0.54
COL27A1-207ENST00000494090 LAPTM4AQ15012 233 aa18.45■□□□□ 0.54
COL27A1-207ENST00000494090 PRAMEF17Q5VTA0 474 aa18.45■□□□□ 0.54
COL27A1-207ENST00000494090 GPRIN1Q7Z2K8 1008 aa18.45■□□□□ 0.54
COL27A1-207ENST00000494090 GHDCQ8N2G8 530 aa18.45■□□□□ 0.54
COL27A1-207ENST00000494090 SUN5Q8TC36 379 aa18.45■□□□□ 0.54
COL27A1-207ENST00000494090 CRYGNQ8WXF5 182 aa18.45■□□□□ 0.54
COL27A1-207ENST00000494090 MMP27Q9H306 513 aa18.45■□□□□ 0.54
COL27A1-207ENST00000494090 BRD7Q9NPI1 651 aa18.45■□□□□ 0.54
COL27A1-207ENST00000494090 DKKL1Q9UK85 242 aa18.45■□□□□ 0.54
COL27A1-207ENST00000494090 CNOT11Q9UKZ1 510 aaKnown RBP18.45■□□□□ 0.54
COL27A1-207ENST00000494090 WASF3Q9UPY6 502 aa18.45■□□□□ 0.54
COL27A1-207ENST00000494090 TP53I11O14683 189 aa18.45■□□□□ 0.54
COL27A1-207ENST00000494090 PREPP48147 710 aa18.45■□□□□ 0.54
COL27A1-207ENST00000494090 DSG2Q14126 1118 aa18.45■□□□□ 0.54
COL27A1-207ENST00000494090 MEDAGQ5VYS4 303 aa18.45■□□□□ 0.54
COL27A1-207ENST00000494090 EIF5AL1Q6IS14 154 aaKnown RBP18.45■□□□□ 0.54
COL27A1-207ENST00000494090 BLOC1S3Q6QNY0 202 aa18.45■□□□□ 0.54
COL27A1-207ENST00000494090 ZNF615Q8N8J6 731 aa18.45■□□□□ 0.54
COL27A1-207ENST00000494090 OR2L8Q8NGY9 312 aa18.45■□□□□ 0.54
COL27A1-207ENST00000494090 IGSF8Q969P0 613 aa18.45■□□□□ 0.54
COL27A1-207ENST00000494090 DPAGT1Q9H3H5 408 aa18.45■□□□□ 0.54
COL27A1-207ENST00000494090 SPHK2Q9NRA0 654 aa18.45■□□□□ 0.54
COL27A1-207ENST00000494090 EXOSC1Q9Y3B2 195 aaKnown RBP18.45■□□□□ 0.54
COL27A1-207ENST00000494090 IGKV6D-21A0A0A0MT36 114 aa18.45■□□□□ 0.54
COL27A1-207ENST00000494090 SOX14O95416 240 aa18.45■□□□□ 0.54
COL27A1-207ENST00000494090 FUT4P22083 530 aa18.45■□□□□ 0.54
COL27A1-207ENST00000494090 ACRV1P26436 265 aa18.45■□□□□ 0.54
COL27A1-207ENST00000494090 GJA8P48165 433 aa18.45■□□□□ 0.54
COL27A1-207ENST00000494090 CHAF1BQ13112 559 aa18.45■□□□□ 0.54
COL27A1-207ENST00000494090 LRIF1Q5T3J3 769 aa18.45■□□□□ 0.54
COL27A1-207ENST00000494090 RMI1Q9H9A7 625 aa18.45■□□□□ 0.54
COL27A1-207ENST00000494090 TAS2R9Q9NYW1 312 aa18.45■□□□□ 0.54
COL27A1-207ENST00000494090 GRHPRQ9UBQ7 328 aa18.45■□□□□ 0.54
COL27A1-207ENST00000494090 HYKKA2RU49 373 aa18.44■□□□□ 0.54
COL27A1-207ENST00000494090 C5orf51A6NDU8 294 aa18.44■□□□□ 0.54
COL27A1-207ENST00000494090 OR6C70A6NIJ9 312 aa18.44■□□□□ 0.54
COL27A1-207ENST00000494090 F8A1P23610 371 aa18.44■□□□□ 0.54
COL27A1-207ENST00000494090 DCKP27707 260 aa18.44■□□□□ 0.54
COL27A1-207ENST00000494090 HNF1BP35680 557 aa18.44■□□□□ 0.54
COL27A1-207ENST00000494090 GRIA2P42262 883 aa18.44■□□□□ 0.54
COL27A1-207ENST00000494090 KCNJ5P48544 419 aa18.44■□□□□ 0.54
COL27A1-207ENST00000494090 COQ5Q5HYK3 327 aa18.44■□□□□ 0.54
COL27A1-207ENST00000494090 C6orf141Q5SZD1 244 aa18.44■□□□□ 0.54
COL27A1-207ENST00000494090 OGFRL1Q5TC84 451 aaPredicted RBP18.44■□□□□ 0.54
COL27A1-207ENST00000494090 ZNF227Q86WZ6 799 aa18.44■□□□□ 0.54
COL27A1-207ENST00000494090 CMTR2Q8IYT2 770 aaKnown RBP18.44■□□□□ 0.54
COL27A1-207ENST00000494090 TESCQ96BS2 214 aa18.44■□□□□ 0.54
COL27A1-207ENST00000494090 ZNF696Q9H7X3 374 aa18.44■□□□□ 0.54
COL27A1-207ENST00000494090 TBCCD1Q9NVR7 557 aa18.44■□□□□ 0.54
COL27A1-207ENST00000494090 PCDHGA3Q9Y5H0 932 aa18.44■□□□□ 0.54
COL27A1-207ENST00000494090 GPR32O75388 356 aa18.44■□□□□ 0.54
COL27A1-207ENST00000494090 PFKLP17858 780 aa18.44■□□□□ 0.54
COL27A1-207ENST00000494090 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.44■□□□□ 0.54
COL27A1-207ENST00000494090 SETD7Q8WTS6 366 aaKnown RBP18.44■□□□□ 0.54
COL27A1-207ENST00000494090 WDR92Q96MX6 357 aa18.44■□□□□ 0.54
COL27A1-207ENST00000494090 CCDC115Q96NT0 180 aa18.44■□□□□ 0.54
COL27A1-207ENST00000494090 PCDH10Q9P2E7 1040 aa18.44■□□□□ 0.54
COL27A1-207ENST00000494090 SUSD2Q9UGT4 822 aa18.44■□□□□ 0.54
COL27A1-207ENST00000494090 GLS2Q9UI32 602 aa18.44■□□□□ 0.54
COL27A1-207ENST00000494090 CHD2O14647 1828 aaKnown RBP18.44■□□□□ 0.54
COL27A1-207ENST00000494090 PDYNP01213 254 aa18.44■□□□□ 0.54
COL27A1-207ENST00000494090 PVALBP20472 110 aaPredicted RBP18.44■□□□□ 0.54
COL27A1-207ENST00000494090 CDKN2DP55273 166 aa18.44■□□□□ 0.54
COL27A1-207ENST00000494090 PTGR1Q14914 329 aa18.44■□□□□ 0.54
COL27A1-207ENST00000494090 SHQ1Q6PI26 577 aaKnown RBP18.44■□□□□ 0.54
COL27A1-207ENST00000494090 G6PC3Q9BUM1 346 aa18.44■□□□□ 0.54
COL27A1-207ENST00000494090 LDAHQ9H6V9 325 aa18.44■□□□□ 0.54
COL27A1-207ENST00000494090 MVB12BQ9H7P6 319 aa18.44■□□□□ 0.54
COL27A1-207ENST00000494090 NUAK1O60285 661 aa18.44■□□□□ 0.54
COL27A1-207ENST00000494090 ZNF623O75123 536 aa18.44■□□□□ 0.54
COL27A1-207ENST00000494090 POU6F2P78424 691 aaPredicted RBP18.44■□□□□ 0.54
COL27A1-207ENST00000494090 PCBP2Q15366 365 aaKnown RBP eCLIP18.44■□□□□ 0.546e-7■■■□□ 16.4
COL27A1-207ENST00000494090 VMACQ2NL98 169 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms