RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 KIAA0907Q7Z7F0 614 aaPredicted RBP11.02□□□□□ -0.65
RFC4-214ENST00000494047 TMC8Q8IU68 726 aa11.02□□□□□ -0.65
RFC4-214ENST00000494047 TAGAPQ8N103 731 aa11.02□□□□□ -0.65
RFC4-214ENST00000494047 RAB42Q8N4Z0 105 aa11.02□□□□□ -0.65
RFC4-214ENST00000494047 SMRP1Q8NCR6 262 aa11.02□□□□□ -0.65
RFC4-214ENST00000494047 ST13P5Q8NFI4 369 aaPredicted RBP11.02□□□□□ -0.65
RFC4-214ENST00000494047 PROX1Q92786 737 aa11.02□□□□□ -0.65
RFC4-214ENST00000494047 WBP2Q969T9 261 aa11.02□□□□□ -0.65
RFC4-214ENST00000494047 TMCO6Q96DC7 493 aa11.02□□□□□ -0.65
RFC4-214ENST00000494047 TXNDC15Q96J42 360 aa11.02□□□□□ -0.65
RFC4-214ENST00000494047 SLC35A5Q9BS91 424 aa11.02□□□□□ -0.65
RFC4-214ENST00000494047 SPATA5L1Q9BVQ7 753 aa11.02□□□□□ -0.65
RFC4-214ENST00000494047 NLNQ9BYT8 704 aa11.02□□□□□ -0.65
RFC4-214ENST00000494047 PRRG3Q9BZD7 231 aa11.02□□□□□ -0.65
RFC4-214ENST00000494047 ZNF334Q9HCZ1 680 aaPredicted RBP11.02□□□□□ -0.65
RFC4-214ENST00000494047 PCDH12Q9NPG4 1184 aa11.02□□□□□ -0.65
RFC4-214ENST00000494047 DYRK4Q9NR20 520 aa11.02□□□□□ -0.65
RFC4-214ENST00000494047 DZANK1Q9NVP4 752 aa11.02□□□□□ -0.65
RFC4-214ENST00000494047 CLEC1BQ9P126 229 aa11.02□□□□□ -0.65
RFC4-214ENST00000494047 ANKMY1Q9P2S6 941 aa11.02□□□□□ -0.65
RFC4-214ENST00000494047 TMCC3Q9ULS5 477 aa11.02□□□□□ -0.65
RFC4-214ENST00000494047 DUSP12Q9UNI6 340 aa11.02□□□□□ -0.65
RFC4-214ENST00000494047 GPR34Q9UPC5 381 aa11.02□□□□□ -0.65
RFC4-214ENST00000494047 MGAT4BQ9UQ53 548 aa11.02□□□□□ -0.65
RFC4-214ENST00000494047 XIRP2A4UGR9 3374 aa11.01□□□□□ -0.65
RFC4-214ENST00000494047 GABRR3A8MPY1 467 aa11.01□□□□□ -0.65
RFC4-214ENST00000494047 C5orf58C9J3I9 102 aa11.01□□□□□ -0.65
RFC4-214ENST00000494047 E7EQ34 232 aa11.01□□□□□ -0.65
RFC4-214ENST00000494047 LINC01565O15544 149 aa11.01□□□□□ -0.65
RFC4-214ENST00000494047 PCDHGA12O60330 932 aa11.01□□□□□ -0.65
RFC4-214ENST00000494047 MITFO75030 526 aaPredicted RBP11.01□□□□□ -0.65
RFC4-214ENST00000494047 PRNPP04156 253 aa11.01□□□□□ -0.65
RFC4-214ENST00000494047 ELFN1P0C7U0 828 aa11.01□□□□□ -0.65
RFC4-214ENST00000494047 C1GALT1C1LP0DN25 315 aa11.01□□□□□ -0.65
RFC4-214ENST00000494047 BMP4P12644 408 aa11.01□□□□□ -0.65
RFC4-214ENST00000494047 CYP4B1P13584 511 aa11.01□□□□□ -0.65
RFC4-214ENST00000494047 IMPA1P29218 277 aa11.01□□□□□ -0.65
RFC4-214ENST00000494047 CD6P30203 668 aa11.01□□□□□ -0.65
RFC4-214ENST00000494047 HLA-FP30511 346 aa11.01□□□□□ -0.65
RFC4-214ENST00000494047 CA8P35219 290 aa11.01□□□□□ -0.65
RFC4-214ENST00000494047 CHI3L1P36222 383 aaPredicted RBP11.01□□□□□ -0.65
RFC4-214ENST00000494047 CRATP43155 626 aa11.01□□□□□ -0.65
RFC4-214ENST00000494047 CDK6Q00534 326 aa11.01□□□□□ -0.65
RFC4-214ENST00000494047 RHAGQ02094 409 aa11.01□□□□□ -0.65
RFC4-214ENST00000494047 DLX2Q07687 328 aaPredicted RBP11.01□□□□□ -0.65
RFC4-214ENST00000494047 CNTN1Q12860 1018 aa11.01□□□□□ -0.65
RFC4-214ENST00000494047 C1DQ13901 141 aaKnown RBP11.01□□□□□ -0.65
RFC4-214ENST00000494047 DGCR6Q14129 220 aa11.01□□□□□ -0.65
RFC4-214ENST00000494047 TMEM44Q2T9K0 475 aa11.01□□□□□ -0.65
RFC4-214ENST00000494047 IQCCQ4KMZ1 466 aa11.01□□□□□ -0.65
RFC4-214ENST00000494047 COLEC12Q5KU26 742 aa11.01□□□□□ -0.65
RFC4-214ENST00000494047 FAM219BQ5XKK7 198 aa11.01□□□□□ -0.65
RFC4-214ENST00000494047 ANKRD54Q6NXT1 300 aa11.01□□□□□ -0.65
RFC4-214ENST00000494047 SLCO4C1Q6ZQN7 724 aa11.01□□□□□ -0.65
RFC4-214ENST00000494047 NCCRP1Q6ZVX7 275 aaPredicted RBP11.01□□□□□ -0.65
RFC4-214ENST00000494047 HS6ST3Q8IZP7 471 aa11.01□□□□□ -0.65
RFC4-214ENST00000494047 LGI4Q8N135 537 aa11.01□□□□□ -0.65
RFC4-214ENST00000494047 METTL4Q8N3J2 472 aa11.01□□□□□ -0.65
RFC4-214ENST00000494047 FAM46DQ8NEK8 389 aa11.01□□□□□ -0.65
RFC4-214ENST00000494047 OR4C15Q8NGM1 316 aa11.01□□□□□ -0.65
RFC4-214ENST00000494047 HUS1BQ8NHY5 278 aa11.01□□□□□ -0.65
RFC4-214ENST00000494047 NDNFQ8TB73 568 aa11.01□□□□□ -0.65
RFC4-214ENST00000494047 ZNF675Q8TD23 568 aa11.01□□□□□ -0.65
RFC4-214ENST00000494047 MED8Q96G25 268 aa11.01□□□□□ -0.65
RFC4-214ENST00000494047 SGPP1Q9BX95 441 aa11.01□□□□□ -0.65
RFC4-214ENST00000494047 EBPLQ9BY08 206 aa11.01□□□□□ -0.65
RFC4-214ENST00000494047 PRM3Q9NNZ6 103 aa11.01□□□□□ -0.65
RFC4-214ENST00000494047 DMRT3Q9NQL9 472 aa11.01□□□□□ -0.65
RFC4-214ENST00000494047 NDUFAF4Q9P032 175 aa11.01□□□□□ -0.65
RFC4-214ENST00000494047 SH3BP4Q9P0V3 963 aa11.01□□□□□ -0.65
RFC4-214ENST00000494047 IL36AQ9UHA7 158 aa11.01□□□□□ -0.65
RFC4-214ENST00000494047 NDOR1Q9UHB4 597 aa11.01□□□□□ -0.65
RFC4-214ENST00000494047 ZNF229Q9UJW7 825 aa11.01□□□□□ -0.65
RFC4-214ENST00000494047 UTS2RQ9UKP6 389 aa11.01□□□□□ -0.65
RFC4-214ENST00000494047 HCFC2Q9Y5Z7 792 aa11.01□□□□□ -0.65
RFC4-214ENST00000494047 GPC6Q9Y625 555 aaPredicted RBP11.01□□□□□ -0.65
RFC4-214ENST00000494047 ENPP4Q9Y6X5 453 aa11.01□□□□□ -0.65
RFC4-214ENST00000494047 BDP1A6H8Y1 2624 aa11□□□□□ -0.65
RFC4-214ENST00000494047 TMX2-CTNND1H3BSU7 103 aa11□□□□□ -0.65
RFC4-214ENST00000494047 CCRL2O00421 344 aa11□□□□□ -0.65
RFC4-214ENST00000494047 VEGFDO43915 354 aa11□□□□□ -0.65
RFC4-214ENST00000494047 LILRB3O75022 631 aa11□□□□□ -0.65
RFC4-214ENST00000494047 GADD45GO95257 159 aa11□□□□□ -0.65
RFC4-214ENST00000494047 FURINP09958 794 aa11□□□□□ -0.65
RFC4-214ENST00000494047 TFPTP0C1Z6 253 aa11□□□□□ -0.65
RFC4-214ENST00000494047 IL9P15248 144 aa11□□□□□ -0.65
RFC4-214ENST00000494047 CD72P21854 359 aa11□□□□□ -0.65
RFC4-214ENST00000494047 XCR1P46094 333 aa11□□□□□ -0.65
RFC4-214ENST00000494047 EIF2B2P49770 351 aaKnown RBP11□□□□□ -0.65
RFC4-214ENST00000494047 ARFIP1P53367 373 aa11□□□□□ -0.65
RFC4-214ENST00000494047 EPHA5P54756 1037 aa11□□□□□ -0.65
RFC4-214ENST00000494047 PCBP3P57721 371 aaKnown RBP11□□□□□ -0.65
RFC4-214ENST00000494047 ST8SIA6P61647 398 aa11□□□□□ -0.65
RFC4-214ENST00000494047 VBP1P61758 197 aa11□□□□□ -0.65
RFC4-214ENST00000494047 SNRPGP62308 76 aaKnown RBP11□□□□□ -0.65
RFC4-214ENST00000494047 TRA2BP62995 288 aaKnown RBP11□□□□□ -0.65
RFC4-214ENST00000494047 COX10Q12887 443 aa11□□□□□ -0.65
RFC4-214ENST00000494047 SLC14A1Q13336 389 aa11□□□□□ -0.65
RFC4-214ENST00000494047 IRF3Q14653 427 aa11□□□□□ -0.65
RFC4-214ENST00000494047 HEPACAMQ14CZ8 416 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms