RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 CCR9P51686 369 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 PLK1P53350 603 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 BACE1P56817 501 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 GTF2BQ00403 316 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 GLO1Q04760 184 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 CYP24A1Q07973 514 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 CRHR2Q13324 411 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 ZNF79Q15937 498 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 DDI2Q5TDH0 399 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 SCARA5Q6ZMJ2 495 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 USP30Q70CQ3 517 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 SLC46A3Q7Z3Q1 461 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 GHDCQ8N2G8 530 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 SPATA6LQ8N4H0 392 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 OR4Q3Q8NH05 313 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 TFAP2BQ92481 460 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 MCCC1Q96RQ3 725 aaPredicted RBP6.6□□□□□ -1.35
VPS13B-205ENST00000493587 MXRA8Q9BRK3 442 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 FTHL17Q9BXU8 183 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 DUSP21Q9H596 190 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 HEXA-AS1Q9H8Q6 139 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 SLC28A3Q9HAS3 691 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 TMEM8AQ9HCN3 771 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 DNAJB9Q9UBS3 223 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 A0A1W2PQL4 384 aaPredicted RBP6.6□□□□□ -1.35
VPS13B-205ENST00000493587 D6RAR5 112 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 G3V2L1 256 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 GPR31O00270 319 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 KIAA0355O15063 1070 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 CHP2O43745 196 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 CRCPO75575 148 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 CNMDO75829 334 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 GP1BAP07359 652 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 CSF2RAP15509 400 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 PAMP19021 973 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 ATP5A1P25705 553 aaKnown RBP6.6□□□□□ -1.35
VPS13B-205ENST00000493587 APEX1P27695 318 aaKnown RBP6.6□□□□□ -1.35
VPS13B-205ENST00000493587 ETV6P41212 452 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 CLCN5P51795 746 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 GTF2A2P52657 109 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 CDH6P55285 790 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 GMFBP60983 142 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 PDZK1IP1Q13113 114 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 SGCGQ13326 291 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 LRRC32Q14392 662 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 KRT33BQ14525 404 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 UGCGQ16739 394 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 ZNF528Q3MIS6 628 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 GTDC1Q4AE62 458 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 MLIPQ5VWP3 458 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 TMEM270Q6UE05 265 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 ZNF227Q86WZ6 799 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 RTL3Q8N8U3 475 aaKnown RBP6.6□□□□□ -1.35
VPS13B-205ENST00000493587 ZSCAN1Q8NBB4 408 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 OR9Q1Q8NGQ5 310 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 OR9A2Q8NGT5 310 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 OR2T4Q8NH00 348 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 KAT2AQ92830 837 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 SLAMF9Q96A28 289 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 ZNF419Q96HQ0 510 aaPredicted RBP6.6□□□□□ -1.35
VPS13B-205ENST00000493587 CCDC74BQ96LY2 380 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 PIGQQ9BRB3 760 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 GPR61Q9BZJ8 451 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 CD244Q9BZW8 370 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 SEMA4CQ9C0C4 833 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 EXTL2Q9UBQ6 330 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 BTNL2Q9UIR0 455 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 SH3BGRL2Q9UJC5 107 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 ZNF225Q9UK10 706 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 KCNK7Q9Y2U2 307 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 MYLKQ15746 1914 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 CXorf65A6NEN9 183 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 BBIP1A8MTZ0 92 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 A8MVJ9 347 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 CD3EAPO15446 510 aaKnown RBP6.6□□□□□ -1.35
VPS13B-205ENST00000493587 PLA2G10O15496 165 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 NARSO43776 548 aaKnown RBP6.6□□□□□ -1.35
VPS13B-205ENST00000493587 OR10H2O60403 315 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 ARIH2O95376 493 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 SERPINA3P01011 423 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 ALDOBP05062 364 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 SYPP08247 313 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 GNA15P30679 374 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 ASPAP45381 313 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 GCGRP47871 477 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 IDH2P48735 452 aaKnown RBP6.6□□□□□ -1.35
VPS13B-205ENST00000493587 PGGT1BP53609 377 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 TNFAIP1Q13829 316 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 EIF4HQ15056 248 aaKnown RBP6.6□□□□□ -1.35
VPS13B-205ENST00000493587 TEX30Q5JUR7 227 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 THEM4Q5T1C6 240 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 MEDAGQ5VYS4 303 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 FRMPD2BQ6IN97 320 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 LAIR2Q6ISS4 152 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 PAPD4Q6PIY7 484 aaKnown RBP6.6□□□□□ -1.35
VPS13B-205ENST00000493587 BLOC1S3Q6QNY0 202 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 CYS1Q717R9 158 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 TMEM17Q86X19 198 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 MIER2Q8N344 545 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 ZNF383Q8NA42 475 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms