RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 DPCR1Q3MIW9 517 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 CFAP221Q4G0U5 840 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 ALFQ53S48 1182 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 TCTE1Q5JU00 501 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 C10orf120Q5SQS8 335 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 TAF3Q5VWG9 929 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 CCDC70Q6NSX1 233 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 LEKR1Q6ZMV7 388 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 C11orf57Q6ZUT1 292 aaPredicted RBP2.86□□□□□ -1.95
PTCD3-218ENST00000493430 PIWIL4Q7Z3Z4 852 aaKnown RBP2.86□□□□□ -1.95
PTCD3-218ENST00000493430 PCGF5Q86SE9 256 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 ITIH5Q86UX2 942 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 ZNF440Q8IYI8 595 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 NUP93Q8N1F7 819 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 DDHD1Q8NEL9 900 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 DEFB124Q8NES8 71 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 DEPDC1BQ8WUY9 529 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 NELFBQ8WX92 580 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 SECISBP2LQ93073 1101 aaKnown RBP2.86□□□□□ -1.95
PTCD3-218ENST00000493430 SLC35C1Q96A29 364 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 SMARCD1Q96GM5 515 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 POM121L2Q96KW2 1035 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 P2RY13Q9BPV8 354 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 ACBD6Q9BR61 282 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 PCGF1Q9BSM1 259 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 RAD21L1Q9H4I0 556 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 TMEM206Q9H813 350 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 TRPV4Q9HBA0 871 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 ZBTB20Q9HC78 741 aaPredicted RBP2.86□□□□□ -1.95
PTCD3-218ENST00000493430 SIX2Q9NPC8 291 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 DMAP1Q9NPF5 467 aaPredicted RBP2.86□□□□□ -1.95
PTCD3-218ENST00000493430 CISHQ9NSE2 258 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 DNAJC17Q9NVM6 304 aaKnown RBP2.86□□□□□ -1.95
PTCD3-218ENST00000493430 TAB2Q9NYJ8 693 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 GDE1Q9NZC3 331 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 MPP6Q9NZW5 540 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 BCCIPQ9P287 314 aaKnown RBP eCLIP2.86□□□□□ -1.95
PTCD3-218ENST00000493430 TSPAN16Q9UKR8 245 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 CDH9Q9ULB4 789 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 GTF2A1LQ9UNN4 478 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 CA5BQ9Y2D0 317 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 ZFYVE26Q68DK2 2539 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 SPEGQ15772 3267 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 MED13Q9UHV7 2174 aa2.85□□□□□ -1.95
PTCD3-218ENST00000493430 PTPRQQ9UMZ3 2332 aa2.85□□□□□ -1.95
PTCD3-218ENST00000493430 A0A1W2PQF6 199 aa2.85□□□□□ -1.95
PTCD3-218ENST00000493430 OR5K3A6NET4 321 aa2.85□□□□□ -1.95
PTCD3-218ENST00000493430 A6NL46 340 aa2.85□□□□□ -1.95
PTCD3-218ENST00000493430 M0QYV0 167 aa2.85□□□□□ -1.95
PTCD3-218ENST00000493430 O00370 1275 aa2.85□□□□□ -1.95
PTCD3-218ENST00000493430 PDXKO00764 312 aa2.85□□□□□ -1.95
PTCD3-218ENST00000493430 ZNF197O14709 1029 aa2.85□□□□□ -1.95
PTCD3-218ENST00000493430 SCAMP1O15126 338 aa2.85□□□□□ -1.95
PTCD3-218ENST00000493430 PIP5K1CO60331 668 aa2.85□□□□□ -1.95
PTCD3-218ENST00000493430 FYNP06241 537 aa2.85□□□□□ -1.95
PTCD3-218ENST00000493430 FAM200BP0CF97 657 aa2.85□□□□□ -1.95
PTCD3-218ENST00000493430 CDAP32320 146 aa2.85□□□□□ -1.95
PTCD3-218ENST00000493430 GTF2H1P32780 548 aa2.85□□□□□ -1.95
PTCD3-218ENST00000493430 APOBEC1P41238 236 aaKnown RBP2.85□□□□□ -1.95
PTCD3-218ENST00000493430 MAGEA11P43364 429 aa2.85□□□□□ -1.95
PTCD3-218ENST00000493430 CCT5P48643 541 aa2.85□□□□□ -1.95
PTCD3-218ENST00000493430 LHX1P48742 406 aa2.85□□□□□ -1.95
PTCD3-218ENST00000493430 TUFMP49411 452 aaKnown RBP2.85□□□□□ -1.95
PTCD3-218ENST00000493430 CSRP3P50461 194 aa2.85□□□□□ -1.95
PTCD3-218ENST00000493430 CCR5P51681 352 aa2.85□□□□□ -1.95
PTCD3-218ENST00000493430 TKTL1P51854 596 aa2.85□□□□□ -1.95
PTCD3-218ENST00000493430 RPS24P62847 133 aaKnown RBP2.85□□□□□ -1.95
PTCD3-218ENST00000493430 RPL10AP62906 217 aaKnown RBP2.85□□□□□ -1.95
PTCD3-218ENST00000493430 IRX4P78413 519 aa2.85□□□□□ -1.95
PTCD3-218ENST00000493430 SEMG2Q02383 582 aa2.85□□□□□ -1.95
PTCD3-218ENST00000493430 INCA1Q0VD86 236 aa2.85□□□□□ -1.95
PTCD3-218ENST00000493430 MAD2L1Q13257 205 aaPredicted RBP2.85□□□□□ -1.95
PTCD3-218ENST00000493430 CUL2Q13617 745 aa2.85□□□□□ -1.95
PTCD3-218ENST00000493430 ALCAMQ13740 583 aa2.85□□□□□ -1.95
PTCD3-218ENST00000493430 KCTD19Q17RG1 926 aaPredicted RBP2.85□□□□□ -1.95
PTCD3-218ENST00000493430 FUT11Q495W5 492 aa2.85□□□□□ -1.95
PTCD3-218ENST00000493430 CCDC40Q4G0X9 1142 aa2.85□□□□□ -1.95
PTCD3-218ENST00000493430 SLC9B1Q4ZJI4 515 aa2.85□□□□□ -1.95
PTCD3-218ENST00000493430 LRRC73Q5JTD7 316 aa2.85□□□□□ -1.95
PTCD3-218ENST00000493430 N4BP2L1Q5TBK1 243 aaPredicted RBP2.85□□□□□ -1.95
PTCD3-218ENST00000493430 SYPL2Q5VXT5 272 aa2.85□□□□□ -1.95
PTCD3-218ENST00000493430 PMF1Q6P1K2 205 aa2.85□□□□□ -1.95
PTCD3-218ENST00000493430 TMEM270Q6UE05 265 aa2.85□□□□□ -1.95
PTCD3-218ENST00000493430 C4orf50Q6ZRC1 276 aa2.85□□□□□ -1.95
PTCD3-218ENST00000493430 TAC4Q86UU9 113 aa2.85□□□□□ -1.95
PTCD3-218ENST00000493430 RALGPS2Q86X27 583 aaPredicted RBP2.85□□□□□ -1.95
PTCD3-218ENST00000493430 CD302Q8IX05 232 aa2.85□□□□□ -1.95
PTCD3-218ENST00000493430 C12orf56Q8IXR9 622 aa2.85□□□□□ -1.95
PTCD3-218ENST00000493430 GPR65Q8IYL9 337 aa2.85□□□□□ -1.95
PTCD3-218ENST00000493430 TMEM86AQ8N2M4 240 aa2.85□□□□□ -1.95
PTCD3-218ENST00000493430 GUF1Q8N442 669 aaKnown RBP2.85□□□□□ -1.95
PTCD3-218ENST00000493430 NKAPQ8N5F7 415 aaKnown RBP2.85□□□□□ -1.95
PTCD3-218ENST00000493430 TEX19Q8NA77 164 aa2.85□□□□□ -1.95
PTCD3-218ENST00000493430 C1orf131Q8NDD1 294 aaKnown RBP2.85□□□□□ -1.95
PTCD3-218ENST00000493430 TSTD1Q8NFU3 115 aa2.85□□□□□ -1.95
PTCD3-218ENST00000493430 UBE2Q2Q8WVN8 375 aa2.85□□□□□ -1.95
PTCD3-218ENST00000493430 KLK6Q92876 244 aa2.85□□□□□ -1.95
PTCD3-218ENST00000493430 SMARCE1Q969G3 411 aa2.85□□□□□ -1.95
PTCD3-218ENST00000493430 TRIM63Q969Q1 353 aa2.85□□□□□ -1.95
PTCD3-218ENST00000493430 PHF21AQ96BD5 680 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms