RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 ERVK-8P63133 956 aa10.94□□□□□ -0.66
LSM2-214ENST00000493387 OCA2Q04671 838 aa10.94□□□□□ -0.66
LSM2-214ENST00000493387 EMX2Q04743 252 aa10.94□□□□□ -0.66
LSM2-214ENST00000493387 SLAMF1Q13291 335 aa10.94□□□□□ -0.66
LSM2-214ENST00000493387 KIAA0040Q15053 153 aa10.94□□□□□ -0.66
LSM2-214ENST00000493387 TBC1D25Q3MII6 688 aa10.94□□□□□ -0.66
LSM2-214ENST00000493387 GALNTL6Q49A17 601 aa10.94□□□□□ -0.66
LSM2-214ENST00000493387 C6orf136Q5SQH8 315 aa10.94□□□□□ -0.66
LSM2-214ENST00000493387 C1orf189Q5VU69 101 aa10.94□□□□□ -0.66
LSM2-214ENST00000493387 ZNF385CQ66K41 422 aaPredicted RBP10.94□□□□□ -0.66
LSM2-214ENST00000493387 OGFOD2Q6N063 350 aa10.94□□□□□ -0.66
LSM2-214ENST00000493387 ZNF517Q6ZMY9 492 aaPredicted RBP10.94□□□□□ -0.66
LSM2-214ENST00000493387 ERMP1Q7Z2K6 904 aa10.94□□□□□ -0.66
LSM2-214ENST00000493387 SPATA19Q7Z5L4 167 aa10.94□□□□□ -0.66
LSM2-214ENST00000493387 CPLX4Q7Z7G2 160 aa10.94□□□□□ -0.66
LSM2-214ENST00000493387 PDSS2Q86YH6 399 aa10.94□□□□□ -0.66
LSM2-214ENST00000493387 FNDC5Q8NAU1 212 aa10.94□□□□□ -0.66
LSM2-214ENST00000493387 SLC38A9Q8NBW4 561 aa10.94□□□□□ -0.66
LSM2-214ENST00000493387 C7orf57Q8NEG2 295 aa10.94□□□□□ -0.66
LSM2-214ENST00000493387 MR1Q95460 341 aa10.94□□□□□ -0.66
LSM2-214ENST00000493387 C11orf24Q96F05 449 aaPredicted RBP10.94□□□□□ -0.66
LSM2-214ENST00000493387 FCRL1Q96LA6 429 aa10.94□□□□□ -0.66
LSM2-214ENST00000493387 C3orf30Q96M34 536 aa10.94□□□□□ -0.66
LSM2-214ENST00000493387 OR1F2PQ96R84 312 aa10.94□□□□□ -0.66
LSM2-214ENST00000493387 ZNF717Q9BY31 904 aaPredicted RBP10.94□□□□□ -0.66
LSM2-214ENST00000493387 AKTIPQ9H8T0 292 aa10.94□□□□□ -0.66
LSM2-214ENST00000493387 NPHS2Q9NP85 383 aa10.94□□□□□ -0.66
LSM2-214ENST00000493387 MKKSQ9NPJ1 570 aaPredicted RBP10.94□□□□□ -0.66
LSM2-214ENST00000493387 LHX9Q9NQ69 397 aa10.94□□□□□ -0.66
LSM2-214ENST00000493387 KLHL14Q9P2G3 628 aa10.94□□□□□ -0.66
LSM2-214ENST00000493387 IFT80Q9P2H3 777 aaPredicted RBP10.94□□□□□ -0.66
LSM2-214ENST00000493387 GPN3Q9UHW5 284 aaPredicted RBP10.94□□□□□ -0.66
LSM2-214ENST00000493387 NXT1Q9UKK6 140 aaKnown RBP10.94□□□□□ -0.66
LSM2-214ENST00000493387 EIF3LQ9Y262 564 aaKnown RBP10.94□□□□□ -0.66
LSM2-214ENST00000493387 A0A0G2JN53 185 aa10.93□□□□□ -0.66
LSM2-214ENST00000493387 GNG14A0A1W2PPG7 69 aa10.93□□□□□ -0.66
LSM2-214ENST00000493387 C4orf51C9J302 202 aa10.93□□□□□ -0.66
LSM2-214ENST00000493387 CHST10O43529 356 aa10.93□□□□□ -0.66
LSM2-214ENST00000493387 RAD1O60671 282 aa10.93□□□□□ -0.66
LSM2-214ENST00000493387 RDH16O75452 317 aa10.93□□□□□ -0.66
LSM2-214ENST00000493387 EEDO75530 441 aaKnown RBP10.93□□□□□ -0.66
LSM2-214ENST00000493387 JUNP05412 331 aaKnown RBP10.93□□□□□ -0.66
LSM2-214ENST00000493387 ANXA4P09525 319 aaPredicted RBP10.93□□□□□ -0.66
LSM2-214ENST00000493387 RAB40ALP0C0E4 278 aa10.93□□□□□ -0.66
LSM2-214ENST00000493387 FAM58BPP0C7Q3 252 aa10.93□□□□□ -0.66
LSM2-214ENST00000493387 PRR35P0CG20 571 aa10.93□□□□□ -0.66
LSM2-214ENST00000493387 PRPS2P11908 318 aa10.93□□□□□ -0.66
LSM2-214ENST00000493387 DDX5P17844 614 aaKnown RBP10.93□□□□□ -0.66
LSM2-214ENST00000493387 CERS1P27544 350 aa10.93□□□□□ -0.66
LSM2-214ENST00000493387 EPHA3P29320 983 aa10.93□□□□□ -0.66
LSM2-214ENST00000493387 ASMTP46597 345 aa10.93□□□□□ -0.66
LSM2-214ENST00000493387 OR1D4P47884 311 aa10.93□□□□□ -0.66
LSM2-214ENST00000493387 IDH3AP50213 366 aa10.93□□□□□ -0.66
LSM2-214ENST00000493387 RAB38P57729 211 aa10.93□□□□□ -0.66
LSM2-214ENST00000493387 RPL38P63173 70 aaKnown RBP10.93□□□□□ -0.66
LSM2-214ENST00000493387 IRX1P78414 480 aaPredicted RBP10.93□□□□□ -0.66
LSM2-214ENST00000493387 RFTN2Q52LD8 501 aaPredicted RBP10.93□□□□□ -0.66
LSM2-214ENST00000493387 FAM219BQ5XKK7 198 aa10.93□□□□□ -0.66
LSM2-214ENST00000493387 NXNQ6DKJ4 435 aa10.93□□□□□ -0.66
LSM2-214ENST00000493387 MRM1Q6IN84 353 aaKnown RBP10.93□□□□□ -0.66
LSM2-214ENST00000493387 NOXRED1Q6NXP6 359 aa10.93□□□□□ -0.66
LSM2-214ENST00000493387 ZNF793Q6ZN11 406 aa10.93□□□□□ -0.66
LSM2-214ENST00000493387 LARP4Q71RC2 724 aaKnown RBP eCLIP10.93□□□□□ -0.662e-9■■■■■ 29.4
LSM2-214ENST00000493387 MED25Q71SY5 747 aa10.93□□□□□ -0.66
LSM2-214ENST00000493387 OVCH1Q7RTY7 1134 aa10.93□□□□□ -0.66
LSM2-214ENST00000493387 MAVSQ7Z434 540 aa10.93□□□□□ -0.66
LSM2-214ENST00000493387 GPR180Q86V85 440 aa10.93□□□□□ -0.66
LSM2-214ENST00000493387 OR51Q1Q8NH59 317 aa10.93□□□□□ -0.66
LSM2-214ENST00000493387 PPP1R36Q96LQ0 422 aa10.93□□□□□ -0.66
LSM2-214ENST00000493387 EFHD1Q9BUP0 239 aa10.93□□□□□ -0.66
LSM2-214ENST00000493387 YIPF2Q9BWQ6 316 aa10.93□□□□□ -0.66
LSM2-214ENST00000493387 FAIM2Q9BWQ8 316 aa10.93□□□□□ -0.66
LSM2-214ENST00000493387 TGIF2Q9GZN2 237 aa10.93□□□□□ -0.66
LSM2-214ENST00000493387 EPN3Q9H201 632 aa10.93□□□□□ -0.66
LSM2-214ENST00000493387 SLC26A1Q9H2B4 701 aa10.93□□□□□ -0.66
LSM2-214ENST00000493387 WDR41Q9HAD4 459 aa10.93□□□□□ -0.66
LSM2-214ENST00000493387 TCF7L2Q9NQB0 619 aa10.93□□□□□ -0.66
LSM2-214ENST00000493387 PRDM9Q9NQV7 894 aa10.93□□□□□ -0.66
LSM2-214ENST00000493387 MRGBPQ9NV56 204 aa10.93□□□□□ -0.66
LSM2-214ENST00000493387 C14orf105Q9NVL8 296 aa10.93□□□□□ -0.66
LSM2-214ENST00000493387 ASIC5Q9NY37 505 aa10.93□□□□□ -0.66
LSM2-214ENST00000493387 NOP53Q9NZM5 478 aaKnown RBP10.93□□□□□ -0.66
LSM2-214ENST00000493387 TRPC4Q9UBN4 977 aa10.93□□□□□ -0.66
LSM2-214ENST00000493387 ZNF282Q9UDV7 671 aaPredicted RBP10.93□□□□□ -0.66
LSM2-214ENST00000493387 DCTN4Q9UJW0 460 aa10.93□□□□□ -0.66
LSM2-214ENST00000493387 ANGPTL2Q9UKU9 493 aa10.93□□□□□ -0.66
LSM2-214ENST00000493387 DAPP1Q9UN19 280 aa10.93□□□□□ -0.66
LSM2-214ENST00000493387 MAPRE3Q9UPY8 281 aa10.93□□□□□ -0.66
LSM2-214ENST00000493387 MRPS33Q9Y291 106 aaKnown RBP10.93□□□□□ -0.66
LSM2-214ENST00000493387 MAU2Q9Y6X3 613 aa10.93□□□□□ -0.66
LSM2-214ENST00000493387 WDR87Q6ZQQ6 2873 aa10.93□□□□□ -0.66
LSM2-214ENST00000493387 SPTBN2O15020 2390 aa10.92□□□□□ -0.66
LSM2-214ENST00000493387 IGLV3-12A0A075B6K2 115 aa10.92□□□□□ -0.66
LSM2-214ENST00000493387 A0A0G2JND7 137 aa10.92□□□□□ -0.66
LSM2-214ENST00000493387 SYNDIG1LA6NDD5 238 aa10.92□□□□□ -0.66
LSM2-214ENST00000493387 ZNF860A6NHJ4 632 aa10.92□□□□□ -0.66
LSM2-214ENST00000493387 C21orf140B9A014 251 aa10.92□□□□□ -0.66
LSM2-214ENST00000493387 CLDN4O14493 209 aa10.92□□□□□ -0.66
LSM2-214ENST00000493387 SHOX2O60902 331 aaPredicted RBP10.92□□□□□ -0.66
LSM2-214ENST00000493387 CYC1P08574 325 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms