RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 VIPP01282 170 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 AMHP03971 560 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 ITGB2P05107 769 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 SYPP08247 313 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 RNH1P13489 461 aaKnown RBP4.02□□□□□ -1.77
BRCA1-220ENST00000492859 ACP5P13686 325 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 ZNF44P15621 663 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 ITIH2P19823 946 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 UGT1A4P22310 534 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 FCGR2BP31994 310 aaPredicted RBP4.02□□□□□ -1.77
BRCA1-220ENST00000492859 OR1D2P34982 312 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 UGT1A3P35503 534 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 UGT1A5P35504 534 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 GPR12P47775 334 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 SLC6A9P48067 706 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 NDUFV1P49821 464 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 HPCAP84074 193 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 MXRA7P84157 204 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 CCZ1BP86790 482 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 CCZ1P86791 482 aaPredicted RBP4.02□□□□□ -1.77
BRCA1-220ENST00000492859 SERTAD2Q14140 314 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 SELPLGQ14242 412 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 ADGRE1Q14246 886 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 GPR19Q15760 415 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 TOMM34Q15785 309 aaPredicted RBP4.02□□□□□ -1.77
BRCA1-220ENST00000492859 DUOXA2Q1HG44 320 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 CBWD6Q4V339 395 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 LBHQ53QV2 105 aaPredicted RBP4.02□□□□□ -1.77
BRCA1-220ENST00000492859 MTX3Q5HYI7 312 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 CBWD3Q5JTY5 395 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 CATSPEREQ5SY80 951 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 MEDAGQ5VYS4 303 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 FCRL6Q6DN72 434 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 ANKRD26P1Q6NSI1 321 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 ARMCX5Q6P1M9 558 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 FOXR1Q6PIV2 292 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 MPZL3Q6UWV2 235 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 HSDL2Q6YN16 418 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 GLDNQ6ZMI3 551 aaPredicted RBP4.02□□□□□ -1.77
BRCA1-220ENST00000492859 P4HA3Q7Z4N8 544 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 PRUNE1Q86TP1 453 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 ANKRD46Q86W74 232 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 HORMAD1Q86X24 394 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 BOD1L2Q8IYS8 172 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 RCOR2Q8IZ40 523 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 GCNT2Q8N0V5 402 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 ZFP82Q8N141 532 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 CERS5Q8N5B7 392 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 UBL4BQ8N7F7 174 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 NOA1Q8NC60 698 aaKnown RBP4.02□□□□□ -1.77
BRCA1-220ENST00000492859 SLC17A8Q8NDX2 589 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 MCUQ8NE86 351 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 TSPAN14Q8NG11 270 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 OR10A7Q8NGE5 316 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 OR5T3Q8NGG3 340 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 OR2D3Q8NGH3 330 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 OR4D10Q8NGI6 311 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 RNASE11Q8TAA1 199 aaKnown RBP4.02□□□□□ -1.77
BRCA1-220ENST00000492859 VANGL1Q8TAA9 524 aaPredicted RBP4.02□□□□□ -1.77
BRCA1-220ENST00000492859 SCARB1Q8WTV0 552 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 RASSF5Q8WWW0 418 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 NRGNQ92686 78 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 YIPF5Q969M3 257 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 PSMG2Q969U7 264 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 SLC25A28Q96A46 364 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 TP53INP1Q96A56 240 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 TAMM41Q96BW9 452 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 ECHDC3Q96DC8 303 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 MMABQ96EY8 250 aaPredicted RBP4.02□□□□□ -1.77
BRCA1-220ENST00000492859 ZNF333Q96JL9 665 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 CLIC6Q96NY7 704 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 TEAD3Q99594 435 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 SPAG8Q99932 426 aaPredicted RBP4.02□□□□□ -1.77
BRCA1-220ENST00000492859 SLITRK2Q9H156 845 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 ELOVL6Q9H5J4 265 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 MARCH7Q9H992 704 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 EBF2Q9HAK2 575 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 SGK2Q9HBY8 427 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 CD274Q9NZQ7 290 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 ANAPC7Q9UJX3 599 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 ST3GAL5Q9UNP4 418 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 PRG3Q9Y2Y8 225 aaPredicted RBP4.02□□□□□ -1.77
BRCA1-220ENST00000492859 REXO2Q9Y3B8 237 aaKnown RBP4.02□□□□□ -1.77
BRCA1-220ENST00000492859 PCDHA2Q9Y5H9 948 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 CPQQ9Y646 472 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 CSNK1G3Q9Y6M4 447 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 MRC2Q9UBG0 1479 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 ATRNL1Q5VV63 1379 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 A0A0U1RRA0 63 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 A0A1W2PNR3 127 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 A0A1W2PPQ1 181 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 A0A1W2PQL4 384 aaPredicted RBP4.02□□□□□ -1.77
BRCA1-220ENST00000492859 LNP1A1A4G5 178 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 C7orf72A4D263 438 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 C2orf78A6NCI8 922 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 SLC38A8A6NNN8 435 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 FAM177BA6PVY3 158 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 SERPINE3A8MV23 424 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 ZNF487B1APH4 448 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms