RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 ZNHIT1O43257 154 aa16.12■□□□□ 0.17
SGMS1-204ENST00000492601 CCNT2O60583 730 aaKnown RBP16.12■□□□□ 0.17
SGMS1-204ENST00000492601 MLYCDO95822 493 aa16.12■□□□□ 0.17
SGMS1-204ENST00000492601 TBX6O95947 436 aaPredicted RBP16.12■□□□□ 0.17
SGMS1-204ENST00000492601 C1QAP02745 245 aa16.12■□□□□ 0.17
SGMS1-204ENST00000492601 S100BP04271 92 aaPredicted RBP16.12■□□□□ 0.17
SGMS1-204ENST00000492601 CERS1P27544 350 aa16.12■□□□□ 0.17
SGMS1-204ENST00000492601 KCNC1P48547 511 aa16.12■□□□□ 0.17
SGMS1-204ENST00000492601 CASP6P55212 293 aa16.12■□□□□ 0.17
SGMS1-204ENST00000492601 RAB38P57729 211 aa16.12■□□□□ 0.17
SGMS1-204ENST00000492601 RAB10P61026 200 aa16.12■□□□□ 0.17
SGMS1-204ENST00000492601 ATP6V0D1P61421 351 aa16.12■□□□□ 0.17
SGMS1-204ENST00000492601 SLC13A2Q13183 592 aa16.12■□□□□ 0.17
SGMS1-204ENST00000492601 DOC2AQ14183 400 aa16.12■□□□□ 0.17
SGMS1-204ENST00000492601 TRADDQ15628 312 aa16.12■□□□□ 0.17
SGMS1-204ENST00000492601 ZKSCAN8Q15776 578 aaPredicted RBP16.12■□□□□ 0.17
SGMS1-204ENST00000492601 PDK4Q16654 411 aa16.12■□□□□ 0.17
SGMS1-204ENST00000492601 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.12■□□□□ 0.172e-8■■■□□ 14.7
SGMS1-204ENST00000492601 KBTBD12Q3ZCT8 623 aa16.12■□□□□ 0.17
SGMS1-204ENST00000492601 TRIM40Q6P9F5 258 aa16.12■□□□□ 0.17
SGMS1-204ENST00000492601 CLNKQ7Z7G1 428 aa16.12■□□□□ 0.17
SGMS1-204ENST00000492601 MRGPRGQ86SM5 289 aa16.12■□□□□ 0.17
SGMS1-204ENST00000492601 ZNF227Q86WZ6 799 aa16.12■□□□□ 0.17
SGMS1-204ENST00000492601 SCUBE1Q8IWY4 988 aa16.12■□□□□ 0.17
SGMS1-204ENST00000492601 SLC34A3Q8N130 599 aa16.12■□□□□ 0.17
SGMS1-204ENST00000492601 CPSF7Q8N684 471 aaKnown RBP16.12■□□□□ 0.17
SGMS1-204ENST00000492601 PPM1NQ8N819 430 aa16.12■□□□□ 0.17
SGMS1-204ENST00000492601 OR2L5Q8NG80 312 aa16.12■□□□□ 0.17
SGMS1-204ENST00000492601 MAGED4Q96JG8 741 aa16.12■□□□□ 0.17
SGMS1-204ENST00000492601 NPLQ9BXD5 320 aaPredicted RBP16.12■□□□□ 0.17
SGMS1-204ENST00000492601 REXO4Q9GZR2 422 aaKnown RBP16.12■□□□□ 0.17
SGMS1-204ENST00000492601 EHD1Q9H4M9 534 aa16.12■□□□□ 0.17
SGMS1-204ENST00000492601 PRM3Q9NNZ6 103 aa16.12■□□□□ 0.17
SGMS1-204ENST00000492601 FBXW2Q9UKT8 454 aa16.12■□□□□ 0.17
SGMS1-204ENST00000492601 RNF112Q9ULX5 631 aa16.12■□□□□ 0.17
SGMS1-204ENST00000492601 ENTPD4Q9Y227 616 aa16.12■□□□□ 0.17
SGMS1-204ENST00000492601 UTP11Q9Y3A2 253 aaKnown RBP16.12■□□□□ 0.17
SGMS1-204ENST00000492601 ASB1Q9Y576 335 aa16.12■□□□□ 0.17
SGMS1-204ENST00000492601 A0A088AWK7 358 aa16.11■□□□□ 0.17
SGMS1-204ENST00000492601 MYOCOSA0A1B0GUC4 107 aa16.11■□□□□ 0.17
SGMS1-204ENST00000492601 CLDN4O14493 209 aa16.11■□□□□ 0.17
SGMS1-204ENST00000492601 FCHO1O14526 889 aa16.11■□□□□ 0.17
SGMS1-204ENST00000492601 NME2P1O60361 137 aa16.11■□□□□ 0.17
SGMS1-204ENST00000492601 CD22P20273 847 aa16.11■□□□□ 0.17
SGMS1-204ENST00000492601 ZNF10P21506 573 aaPredicted RBP16.11■□□□□ 0.17
SGMS1-204ENST00000492601 NME2P22392 152 aa16.11■□□□□ 0.17
SGMS1-204ENST00000492601 GSTM2P28161 218 aa16.11■□□□□ 0.17
SGMS1-204ENST00000492601 GRNP28799 593 aaKnown RBP16.11■□□□□ 0.17
SGMS1-204ENST00000492601 CASQ1P31415 396 aa16.11■□□□□ 0.17
SGMS1-204ENST00000492601 SPRP35270 261 aaPredicted RBP16.11■□□□□ 0.17
SGMS1-204ENST00000492601 HLCSP50747 726 aa16.11■□□□□ 0.17
SGMS1-204ENST00000492601 CLCN2P51788 898 aa16.11■□□□□ 0.17
SGMS1-204ENST00000492601 SLMAPQ14BN4 828 aa16.11■□□□□ 0.17
SGMS1-204ENST00000492601 ADPRMQ3LIE5 342 aa16.11■□□□□ 0.17
SGMS1-204ENST00000492601 KRTCAP3Q53RY4 240 aa16.11■□□□□ 0.17
SGMS1-204ENST00000492601 CDKL4Q5MAI5 379 aa16.11■□□□□ 0.17
SGMS1-204ENST00000492601 RAPH1Q70E73 1250 aa16.11■□□□□ 0.17
SGMS1-204ENST00000492601 CYS1Q717R9 158 aa16.11■□□□□ 0.17
SGMS1-204ENST00000492601 CMC1Q7Z7K0 106 aa16.11■□□□□ 0.17
SGMS1-204ENST00000492601 SIAH3Q8IW03 269 aa16.11■□□□□ 0.17
SGMS1-204ENST00000492601 APCDD1LQ8NCL9 501 aa16.11■□□□□ 0.17
SGMS1-204ENST00000492601 PDPRQ8NCN5 879 aa16.11■□□□□ 0.17
SGMS1-204ENST00000492601 B3GNT7Q8NFL0 401 aa16.11■□□□□ 0.17
SGMS1-204ENST00000492601 FBXO25Q8TCJ0 367 aa16.11■□□□□ 0.17
SGMS1-204ENST00000492601 SREK1Q8WXA9 508 aaKnown RBP16.11■□□□□ 0.17
SGMS1-204ENST00000492601 KIAA1191Q96A73 305 aa16.11■□□□□ 0.17
SGMS1-204ENST00000492601 PTCD3Q96EY7 689 aaKnown RBP16.11■□□□□ 0.17
SGMS1-204ENST00000492601 SEC16BQ96JE7 1060 aa16.11■□□□□ 0.17
SGMS1-204ENST00000492601 UBXN10Q96LJ8 280 aa16.11■□□□□ 0.17
SGMS1-204ENST00000492601 F2RL3Q96RI0 385 aa16.11■□□□□ 0.17
SGMS1-204ENST00000492601 CSF3RQ99062 836 aa16.11■□□□□ 0.17
SGMS1-204ENST00000492601 PITHD1Q9GZP4 211 aaPredicted RBP16.11■□□□□ 0.17
SGMS1-204ENST00000492601 ALG9Q9H6U8 611 aa16.11■□□□□ 0.17
SGMS1-204ENST00000492601 COPS7BQ9H9Q2 264 aaPredicted RBP16.11■□□□□ 0.17
SGMS1-204ENST00000492601 PTBP2Q9UKA9 531 aaKnown RBP16.11■□□□□ 0.17
SGMS1-204ENST00000492601 CLDN16Q9Y5I7 305 aa16.11■□□□□ 0.17
SGMS1-204ENST00000492601 HNRNPRO43390 633 aaKnown RBP16.1■□□□□ 0.17
SGMS1-204ENST00000492601 GSTA2P09210 222 aa16.1■□□□□ 0.17
SGMS1-204ENST00000492601 ESRRAP11474 423 aaPredicted RBP16.1■□□□□ 0.17
SGMS1-204ENST00000492601 TRHRP34981 398 aaPredicted RBP16.1■□□□□ 0.17
SGMS1-204ENST00000492601 MAGEA4P43358 317 aa16.1■□□□□ 0.17
SGMS1-204ENST00000492601 MTTPP55157 894 aa16.1■□□□□ 0.17
SGMS1-204ENST00000492601 LIM2P55344 173 aa16.1■□□□□ 0.17
SGMS1-204ENST00000492601 HSD17B7P56937 341 aa16.1■□□□□ 0.17
SGMS1-204ENST00000492601 HSF1Q00613 529 aa16.1■□□□□ 0.17
SGMS1-204ENST00000492601 IRF8Q02556 426 aa16.1■□□□□ 0.17
SGMS1-204ENST00000492601 DLG1Q12959 904 aa16.1■□□□□ 0.17
SGMS1-204ENST00000492601 CHIT1Q13231 466 aa16.1■□□□□ 0.17
SGMS1-204ENST00000492601 RNFT1Q5M7Z0 435 aa16.1■□□□□ 0.17
SGMS1-204ENST00000492601 GRTP1Q5TC63 336 aa16.1■□□□□ 0.17
SGMS1-204ENST00000492601 MTFR2Q6P444 385 aa16.1■□□□□ 0.17
SGMS1-204ENST00000492601 ABHD17CQ6PCB6 329 aa16.1■□□□□ 0.17
SGMS1-204ENST00000492601 SPPL2CQ8IUH8 684 aa16.1■□□□□ 0.17
SGMS1-204ENST00000492601 ZNF808Q8N4W9 903 aaPredicted RBP16.1■□□□□ 0.17
SGMS1-204ENST00000492601 FBF1Q8TES7 1133 aa16.1■□□□□ 0.17
SGMS1-204ENST00000492601 NCLNQ969V3 563 aa16.1■□□□□ 0.17
SGMS1-204ENST00000492601 TMEM125Q96AQ2 219 aa16.1■□□□□ 0.17
SGMS1-204ENST00000492601 SERINC2Q96SA4 455 aa16.1■□□□□ 0.17
SGMS1-204ENST00000492601 EFCAB11Q9BUY7 163 aa16.1■□□□□ 0.17
SGMS1-204ENST00000492601 ZNF223Q9UK11 482 aaPredicted RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms