RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 MAPKAPK3Q16644 382 aa8.54□□□□□ -1.04
HDAC3-212ENST00000492407 TEDDM1Q5T9Z0 273 aa8.54□□□□□ -1.04
HDAC3-212ENST00000492407 HECTD2Q5U5R9 776 aa8.54□□□□□ -1.04
HDAC3-212ENST00000492407 NXPE4Q6UWF7 544 aa8.54□□□□□ -1.04
HDAC3-212ENST00000492407 RGS9BPQ6ZS82 235 aa8.54□□□□□ -1.04
HDAC3-212ENST00000492407 SYDE1Q6ZW31 735 aaPredicted RBP8.54□□□□□ -1.04
HDAC3-212ENST00000492407 ZNF227Q86WZ6 799 aa8.54□□□□□ -1.04
HDAC3-212ENST00000492407 CHERPQ8IWX8 916 aaKnown RBP8.54□□□□□ -1.04
HDAC3-212ENST00000492407 KLHDC8AQ8IYD2 350 aa8.54□□□□□ -1.04
HDAC3-212ENST00000492407 PDIK1LQ8N165 341 aa8.54□□□□□ -1.04
HDAC3-212ENST00000492407 ZFP62Q8NB50 900 aaPredicted RBP8.54□□□□□ -1.04
HDAC3-212ENST00000492407 ANKK1Q8NFD2 765 aa8.54□□□□□ -1.04
HDAC3-212ENST00000492407 B3GNT7Q8NFL0 401 aa8.54□□□□□ -1.04
HDAC3-212ENST00000492407 OR5T3Q8NGG3 340 aa8.54□□□□□ -1.04
HDAC3-212ENST00000492407 FAM57AQ8TBR7 257 aa8.54□□□□□ -1.04
HDAC3-212ENST00000492407 AGAP11Q8TF27 550 aa8.54□□□□□ -1.04
HDAC3-212ENST00000492407 ASB5Q8WWX0 329 aa8.54□□□□□ -1.04
HDAC3-212ENST00000492407 TSLPQ969D9 159 aa8.54□□□□□ -1.04
HDAC3-212ENST00000492407 NEIL2Q969S2 332 aa8.54□□□□□ -1.04
HDAC3-212ENST00000492407 ALKBH8Q96BT7 664 aaKnown RBP8.54□□□□□ -1.04
HDAC3-212ENST00000492407 THOC1Q96FV9 657 aaKnown RBP8.54□□□□□ -1.04
HDAC3-212ENST00000492407 NDNQ99608 321 aa8.54□□□□□ -1.04
HDAC3-212ENST00000492407 HES7Q9BYE0 225 aa8.54□□□□□ -1.04
HDAC3-212ENST00000492407 DEFB126Q9BYW3 111 aa8.54□□□□□ -1.04
HDAC3-212ENST00000492407 RABEP2Q9H5N1 569 aa8.54□□□□□ -1.04
HDAC3-212ENST00000492407 NT5DC2Q9H857 520 aa8.54□□□□□ -1.04
HDAC3-212ENST00000492407 ANKRD10Q9NXR5 420 aa8.54□□□□□ -1.04
HDAC3-212ENST00000492407 COQ3Q9NZJ6 369 aa8.54□□□□□ -1.04
HDAC3-212ENST00000492407 SH3BGRL2Q9UJC5 107 aa8.54□□□□□ -1.04
HDAC3-212ENST00000492407 ZGRF1Q86YA3 2104 aa8.53□□□□□ -1.04
HDAC3-212ENST00000492407 ZNF860A6NHJ4 632 aa8.53□□□□□ -1.04
HDAC3-212ENST00000492407 FOXO6A8MYZ6 492 aa8.53□□□□□ -1.04
HDAC3-212ENST00000492407 CLDN4O14493 209 aa8.53□□□□□ -1.04
HDAC3-212ENST00000492407 ADAM10O14672 748 aa8.53□□□□□ -1.04
HDAC3-212ENST00000492407 FANCGO15287 622 aa8.53□□□□□ -1.04
HDAC3-212ENST00000492407 B4GALT2O60909 372 aa8.53□□□□□ -1.04
HDAC3-212ENST00000492407 H2AFYO75367 372 aaKnown RBP8.53□□□□□ -1.04
HDAC3-212ENST00000492407 CDC123O75794 336 aaPredicted RBP8.53□□□□□ -1.04
HDAC3-212ENST00000492407 WISP2O76076 250 aa8.53□□□□□ -1.04
HDAC3-212ENST00000492407 F7P08709 466 aaPredicted RBP8.53□□□□□ -1.04
HDAC3-212ENST00000492407 GNAZP19086 355 aa8.53□□□□□ -1.04
HDAC3-212ENST00000492407 TFEBP19484 476 aa8.53□□□□□ -1.04
HDAC3-212ENST00000492407 KIR3DL1P43629 444 aa8.53□□□□□ -1.04
HDAC3-212ENST00000492407 ITGA8P53708 1063 aa8.53□□□□□ -1.04
HDAC3-212ENST00000492407 CCZ1BP86790 482 aa8.53□□□□□ -1.04
HDAC3-212ENST00000492407 CCZ1P86791 482 aaPredicted RBP8.53□□□□□ -1.04
HDAC3-212ENST00000492407 HYAL2Q12891 473 aa8.53□□□□□ -1.04
HDAC3-212ENST00000492407 RCN2Q14257 317 aa8.53□□□□□ -1.04
HDAC3-212ENST00000492407 MORF4L2Q15014 288 aa8.53□□□□□ -1.04
HDAC3-212ENST00000492407 PPP1R3AQ16821 1122 aa8.53□□□□□ -1.04
HDAC3-212ENST00000492407 CDKL4Q5MAI5 379 aa8.53□□□□□ -1.04
HDAC3-212ENST00000492407 CATSPEREQ5SY80 951 aa8.53□□□□□ -1.04
HDAC3-212ENST00000492407 RBM20Q5T481 1227 aaKnown RBP8.53□□□□□ -1.04
HDAC3-212ENST00000492407 ZNF468Q5VIY5 522 aaPredicted RBP8.53□□□□□ -1.04
HDAC3-212ENST00000492407 STEAP4Q687X5 459 aa8.53□□□□□ -1.04
HDAC3-212ENST00000492407 PAOXQ6QHF9 649 aa8.53□□□□□ -1.04
HDAC3-212ENST00000492407 SBSNQ6UWP8 590 aa8.53□□□□□ -1.04
HDAC3-212ENST00000492407 MBOAT1Q6ZNC8 495 aa8.53□□□□□ -1.04
HDAC3-212ENST00000492407 THOC6Q86W42 341 aaKnown RBP8.53□□□□□ -1.04
HDAC3-212ENST00000492407 SCUBE1Q8IWY4 988 aa8.53□□□□□ -1.04
HDAC3-212ENST00000492407 SHISA5Q8N114 240 aa8.53□□□□□ -1.04
HDAC3-212ENST00000492407 CYP4X1Q8N118 509 aa8.53□□□□□ -1.04
HDAC3-212ENST00000492407 ANKRD53Q8N9V6 530 aa8.53□□□□□ -1.04
HDAC3-212ENST00000492407 APCDD1LQ8NCL9 501 aa8.53□□□□□ -1.04
HDAC3-212ENST00000492407 CREB3L4Q8TEY5 395 aa8.53□□□□□ -1.04
HDAC3-212ENST00000492407 CA5BP1Q8WTZ4 195 aa8.53□□□□□ -1.04
HDAC3-212ENST00000492407 CHTF18Q8WVB6 975 aa8.53□□□□□ -1.04
HDAC3-212ENST00000492407 GAL3ST3Q96A11 431 aa8.53□□□□□ -1.04
HDAC3-212ENST00000492407 PYCR2Q96C36 320 aa8.53□□□□□ -1.04
HDAC3-212ENST00000492407 MS4A14Q96JA4 679 aa8.53□□□□□ -1.04
HDAC3-212ENST00000492407 FAR2Q96K12 515 aa8.53□□□□□ -1.04
HDAC3-212ENST00000492407 RUNDC3BQ96NL0 473 aa8.53□□□□□ -1.04
HDAC3-212ENST00000492407 OSBPL9Q96SU4 736 aa8.53□□□□□ -1.04
HDAC3-212ENST00000492407 EHD1Q9H4M9 534 aa8.53□□□□□ -1.04
HDAC3-212ENST00000492407 POPDC3Q9HBV1 291 aa8.53□□□□□ -1.04
HDAC3-212ENST00000492407 MCCC2Q9HCC0 563 aa8.53□□□□□ -1.04
HDAC3-212ENST00000492407 NSMCE4AQ9NXX6 385 aa8.53□□□□□ -1.04
HDAC3-212ENST00000492407 FAM53CQ9NYF3 392 aa8.53□□□□□ -1.04
HDAC3-212ENST00000492407 IL20Q9NYY1 176 aa8.53□□□□□ -1.04
HDAC3-212ENST00000492407 ZFATQ9P243 1243 aa8.53□□□□□ -1.04
HDAC3-212ENST00000492407 MRPS33Q9Y291 106 aaKnown RBP8.53□□□□□ -1.04
HDAC3-212ENST00000492407 YARS2Q9Y2Z4 477 aaKnown RBP8.53□□□□□ -1.04
HDAC3-212ENST00000492407 HEATR5BQ9P2D3 2071 aa8.53□□□□□ -1.04
HDAC3-212ENST00000492407 USP27XA6NNY8 438 aa8.52□□□□□ -1.05
HDAC3-212ENST00000492407 PEX1O43933 1283 aa8.52□□□□□ -1.05
HDAC3-212ENST00000492407 DNAJB6O75190 326 aa8.52□□□□□ -1.05
HDAC3-212ENST00000492407 ZFAND5O76080 213 aa8.52□□□□□ -1.05
HDAC3-212ENST00000492407 SERPIND1P05546 499 aa8.52□□□□□ -1.05
HDAC3-212ENST00000492407 C1GALT1C1LP0DN25 315 aa8.52□□□□□ -1.05
HDAC3-212ENST00000492407 ZNF37AP17032 561 aaPredicted RBP8.52□□□□□ -1.05
HDAC3-212ENST00000492407 IVDP26440 423 aa8.52□□□□□ -1.05
HDAC3-212ENST00000492407 PTGS2P35354 604 aa8.52□□□□□ -1.05
HDAC3-212ENST00000492407 GPR143P51810 404 aa8.52□□□□□ -1.05
HDAC3-212ENST00000492407 CTAG1AP78358 180 aa8.52□□□□□ -1.05
HDAC3-212ENST00000492407 BTG2P78543 158 aa8.52□□□□□ -1.05
HDAC3-212ENST00000492407 ADPRMQ3LIE5 342 aa8.52□□□□□ -1.05
HDAC3-212ENST00000492407 RNFT1Q5M7Z0 435 aa8.52□□□□□ -1.05
HDAC3-212ENST00000492407 ARHGAP11AQ6P4F7 1023 aa8.52□□□□□ -1.05
HDAC3-212ENST00000492407 SPNS3Q6ZMD2 512 aa8.52□□□□□ -1.05
HDAC3-212ENST00000492407 SPATA21Q7Z572 469 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms