RNA–Protein interactions for RNA: ENST00000492099.1

SH3GL3-204, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,170 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-204ENST00000492099 SLC44A1Q8WWI5 657 aa25.42■■□□□ 1.66
SH3GL3-204ENST00000492099 COPS7BQ9H9Q2 264 aaPredicted RBP25.42■■□□□ 1.66
SH3GL3-204ENST00000492099 NECTIN3Q9NQS3 549 aa25.42■■□□□ 1.66
SH3GL3-204ENST00000492099 OLAHQ9NV23 265 aa25.42■■□□□ 1.66
SH3GL3-204ENST00000492099 MRPS33Q9Y291 106 aaKnown RBP25.42■■□□□ 1.66
SH3GL3-204ENST00000492099 IKBKGQ9Y6K9 419 aa25.42■■□□□ 1.66
SH3GL3-204ENST00000492099 SAGE2PA6NJ88 616 aa25.41■■□□□ 1.66
SH3GL3-204ENST00000492099 CDK2AP1O14519 115 aa25.41■■□□□ 1.66
SH3GL3-204ENST00000492099 DDAH2O95865 285 aa25.41■■□□□ 1.66
SH3GL3-204ENST00000492099 GFAPP14136 432 aa25.41■■□□□ 1.66
SH3GL3-204ENST00000492099 SERPINB1P30740 379 aa25.41■■□□□ 1.66
SH3GL3-204ENST00000492099 MSH2P43246 934 aa25.41■■□□□ 1.66
SH3GL3-204ENST00000492099 HSD17B7P56937 341 aa25.41■■□□□ 1.66
SH3GL3-204ENST00000492099 RCN2Q14257 317 aa25.41■■□□□ 1.66
SH3GL3-204ENST00000492099 UBAP2Q5T6F2 1119 aaKnown RBP25.41■■□□□ 1.66
SH3GL3-204ENST00000492099 ADNP2Q6IQ32 1131 aa25.41■■□□□ 1.66
SH3GL3-204ENST00000492099 MED27Q6P2C8 311 aa25.41■■□□□ 1.66
SH3GL3-204ENST00000492099 KCNC2Q96PR1 638 aa25.41■■□□□ 1.66
SH3GL3-204ENST00000492099 SLX1AQ9BQ83 275 aa25.41■■□□□ 1.66
SH3GL3-204ENST00000492099 ROGDIQ9GZN7 287 aa25.41■■□□□ 1.66
SH3GL3-204ENST00000492099 USP9YO00507 2555 aaPredicted RBP25.41■■□□□ 1.66
SH3GL3-204ENST00000492099 E2F3O00716 465 aa25.4■■□□□ 1.66
SH3GL3-204ENST00000492099 RASAL1O95294 804 aa25.4■■□□□ 1.66
SH3GL3-204ENST00000492099 GP1BBP13224 206 aa25.4■■□□□ 1.66
SH3GL3-204ENST00000492099 ECHS1P30084 290 aa25.4■■□□□ 1.66
SH3GL3-204ENST00000492099 SERPINB9P50453 376 aa25.4■■□□□ 1.66
SH3GL3-204ENST00000492099 ALDH18A1P54886 795 aaKnown RBP25.4■■□□□ 1.66
SH3GL3-204ENST00000492099 NAA30Q147X3 362 aaPredicted RBP25.4■■□□□ 1.66
SH3GL3-204ENST00000492099 SETDB1Q15047 1291 aa25.4■■□□□ 1.66
SH3GL3-204ENST00000492099 PFKFB4Q16877 469 aa25.4■■□□□ 1.66
SH3GL3-204ENST00000492099 TAOK1Q7L7X3 1001 aa25.4■■□□□ 1.66
SH3GL3-204ENST00000492099 SCUBE1Q8IWY4 988 aa25.4■■□□□ 1.66
SH3GL3-204ENST00000492099 LAS2Q8IYD9 372 aa25.4■■□□□ 1.66
SH3GL3-204ENST00000492099 CEP112Q8N8E3 955 aa25.4■■□□□ 1.66
SH3GL3-204ENST00000492099 ZNF473Q8WTR7 871 aaKnown RBP25.4■■□□□ 1.66
SH3GL3-204ENST00000492099 F2RL3Q96RI0 385 aa25.4■■□□□ 1.66
SH3GL3-204ENST00000492099 UTP23Q9BRU9 249 aaKnown RBP25.4■■□□□ 1.66
SH3GL3-204ENST00000492099 VPS11Q9H270 941 aa25.4■■□□□ 1.66
SH3GL3-204ENST00000492099 PRM3Q9NNZ6 103 aa25.4■■□□□ 1.66
SH3GL3-204ENST00000492099 PRTFDC1Q9NRG1 225 aa25.4■■□□□ 1.66
SH3GL3-204ENST00000492099 ANGPTL3Q9Y5C1 460 aa25.4■■□□□ 1.66
SH3GL3-204ENST00000492099 SYNDIG1LA6NDD5 238 aa25.39■■□□□ 1.66
SH3GL3-204ENST00000492099 TUBA3CQ13748 450 aa25.39■■□□□ 1.66
SH3GL3-204ENST00000492099 TMEM35AQ53FP2 167 aa25.39■■□□□ 1.66
SH3GL3-204ENST00000492099 ZNF324BQ6AW86 544 aaPredicted RBP25.39■■□□□ 1.66
SH3GL3-204ENST00000492099 TUBA3EQ6PEY2 450 aa25.39■■□□□ 1.66
SH3GL3-204ENST00000492099 ZNF595Q8IYB9 648 aa25.39■■□□□ 1.66
SH3GL3-204ENST00000492099 TEX9Q8N6V9 391 aa25.39■■□□□ 1.66
SH3GL3-204ENST00000492099 DNAJB8Q8NHS0 232 aa25.39■■□□□ 1.66
SH3GL3-204ENST00000492099 GPR78Q96P69 363 aa25.39■■□□□ 1.66
SH3GL3-204ENST00000492099 TAAR6Q96RI8 345 aa25.39■■□□□ 1.66
SH3GL3-204ENST00000492099 PAFAH2Q99487 392 aa25.39■■□□□ 1.66
SH3GL3-204ENST00000492099 NPAS2Q99743 824 aa25.39■■□□□ 1.66
SH3GL3-204ENST00000492099 TBCDQ9BTW9 1192 aa25.39■■□□□ 1.66
SH3GL3-204ENST00000492099 MS4A8Q9BY19 250 aa25.39■■□□□ 1.66
SH3GL3-204ENST00000492099 PRDM7Q9NQW5 492 aa25.39■■□□□ 1.66
SH3GL3-204ENST00000492099 ADGRE2Q9UHX3 823 aa25.39■■□□□ 1.66
SH3GL3-204ENST00000492099 DAPP1Q9UN19 280 aa25.39■■□□□ 1.66
SH3GL3-204ENST00000492099 SLC5A6Q9Y289 635 aa25.39■■□□□ 1.66
SH3GL3-204ENST00000492099 PCDHGB6Q9Y5F9 930 aa25.39■■□□□ 1.66
SH3GL3-204ENST00000492099 TNPO3Q9Y5L0 923 aaKnown RBP25.39■■□□□ 1.66
SH3GL3-204ENST00000492099 KLK8O60259 260 aa25.38■■□□□ 1.65
SH3GL3-204ENST00000492099 CRYABP02511 175 aaKnown RBP25.38■■□□□ 1.65
SH3GL3-204ENST00000492099 PCNAP12004 261 aa25.38■■□□□ 1.65
SH3GL3-204ENST00000492099 CERS1P27544 350 aa25.38■■□□□ 1.65
SH3GL3-204ENST00000492099 LIM2P55344 173 aa25.38■■□□□ 1.65
SH3GL3-204ENST00000492099 SLC13A2Q13183 592 aa25.38■■□□□ 1.65
SH3GL3-204ENST00000492099 TERF2Q15554 542 aa25.38■■□□□ 1.65
SH3GL3-204ENST00000492099 ZNF766Q5HY98 468 aa25.38■■□□□ 1.65
SH3GL3-204ENST00000492099 GRHL2Q6ISB3 625 aa25.38■■□□□ 1.65
SH3GL3-204ENST00000492099 METTL2BQ6P1Q9 378 aaKnown RBP25.38■■□□□ 1.65
SH3GL3-204ENST00000492099 CHSY3Q70JA7 882 aa25.38■■□□□ 1.65
SH3GL3-204ENST00000492099 RPS19BP1Q86WX3 136 aaKnown RBP25.38■■□□□ 1.65
SH3GL3-204ENST00000492099 NFAM1Q8NET5 270 aaPredicted RBP25.38■■□□□ 1.65
SH3GL3-204ENST00000492099 OR7G3Q8NG95 312 aa25.38■■□□□ 1.65
SH3GL3-204ENST00000492099 NR4A3Q92570 626 aa25.38■■□□□ 1.65
SH3GL3-204ENST00000492099 ISL2Q96A47 359 aa25.38■■□□□ 1.65
SH3GL3-204ENST00000492099 CDCP1Q9H5V8 836 aa25.38■■□□□ 1.65
SH3GL3-204ENST00000492099 HIVEP3Q5T1R4 2406 aa25.37■■□□□ 1.65
SH3GL3-204ENST00000492099 GABRR3A8MPY1 467 aa25.37■■□□□ 1.65
SH3GL3-204ENST00000492099 A8MUA0 341 aa25.37■■□□□ 1.65
SH3GL3-204ENST00000492099 KRT38O76015 456 aa25.37■■□□□ 1.65
SH3GL3-204ENST00000492099 CNTFP26441 200 aa25.37■■□□□ 1.65
SH3GL3-204ENST00000492099 CD96P40200 585 aa25.37■■□□□ 1.65
SH3GL3-204ENST00000492099 PCBP2Q15366 365 aaKnown RBP eCLIP25.37■■□□□ 1.65
SH3GL3-204ENST00000492099 LIPJQ5W064 366 aa25.37■■□□□ 1.65
SH3GL3-204ENST00000492099 KIF2BQ8N4N8 673 aa25.37■■□□□ 1.65
SH3GL3-204ENST00000492099 HORMAD2Q8N7B1 307 aa25.37■■□□□ 1.65
SH3GL3-204ENST00000492099 FAM47BQ8NA70 645 aa25.37■■□□□ 1.65
SH3GL3-204ENST00000492099 CMTM7Q96FZ5 175 aa25.37■■□□□ 1.65
SH3GL3-204ENST00000492099 LYRM4Q9HD34 91 aa25.37■■□□□ 1.65
SH3GL3-204ENST00000492099 ERRFI1Q9UJM3 462 aaPredicted RBP25.37■■□□□ 1.65
SH3GL3-204ENST00000492099 ZNF180Q9UJW8 692 aa25.37■■□□□ 1.65
SH3GL3-204ENST00000492099 POLEQ07864 2286 aa25.37■■□□□ 1.65
SH3GL3-204ENST00000492099 A0A087WUV0 522 aaPredicted RBP25.36■■□□□ 1.65
SH3GL3-204ENST00000492099 CYR61O00622 381 aa25.36■■□□□ 1.65
SH3GL3-204ENST00000492099 MAN1A2O60476 641 aa25.36■■□□□ 1.65
SH3GL3-204ENST00000492099 RBP1P09455 135 aa25.36■■□□□ 1.65
SH3GL3-204ENST00000492099 MAGEA12P43365 314 aa25.36■■□□□ 1.65
SH3GL3-204ENST00000492099 PIK3CGP48736 1102 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms