RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 BDKRB1P46663 353 aa6.53□□□□□ -1.36
PDLIM1-203ENST00000490391 DNASE1L1P49184 302 aa6.53□□□□□ -1.36
PDLIM1-203ENST00000490391 GPR143P51810 404 aa6.53□□□□□ -1.36
PDLIM1-203ENST00000490391 HSPA14Q0VDF9 509 aa6.53□□□□□ -1.36
PDLIM1-203ENST00000490391 FOXF2Q12947 444 aa6.53□□□□□ -1.36
PDLIM1-203ENST00000490391 ETFDHQ16134 617 aa6.53□□□□□ -1.36
PDLIM1-203ENST00000490391 NDUFA9Q16795 377 aa6.53□□□□□ -1.36
PDLIM1-203ENST00000490391 ZNF750Q32MQ0 723 aa6.53□□□□□ -1.36
PDLIM1-203ENST00000490391 DPCR1Q3MIW9 517 aa6.53□□□□□ -1.36
PDLIM1-203ENST00000490391 FAM174BQ3ZCQ3 159 aa6.53□□□□□ -1.36
PDLIM1-203ENST00000490391 XKR6Q5GH73 641 aa6.53□□□□□ -1.36
PDLIM1-203ENST00000490391 CDKAL1Q5VV42 579 aa6.53□□□□□ -1.36
PDLIM1-203ENST00000490391 NSUN5P2Q63ZY6 315 aa6.53□□□□□ -1.36
PDLIM1-203ENST00000490391 KCTD11Q693B1 232 aa6.53□□□□□ -1.36
PDLIM1-203ENST00000490391 DENND5AQ6IQ26 1287 aa6.53□□□□□ -1.36
PDLIM1-203ENST00000490391 SUSD1Q6UWL2 747 aa6.53□□□□□ -1.36
PDLIM1-203ENST00000490391 TAS2R42Q7RTR8 314 aa6.53□□□□□ -1.36
PDLIM1-203ENST00000490391 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.53□□□□□ -1.36
PDLIM1-203ENST00000490391 OR5T3Q8NGG3 340 aa6.53□□□□□ -1.36
PDLIM1-203ENST00000490391 SGMS2Q8NHU3 365 aa6.53□□□□□ -1.36
PDLIM1-203ENST00000490391 MBD3L2Q8NHZ7 208 aaPredicted RBP6.53□□□□□ -1.36
PDLIM1-203ENST00000490391 NEIL3Q8TAT5 605 aa6.53□□□□□ -1.36
PDLIM1-203ENST00000490391 SLC22A8Q8TCC7 542 aa6.53□□□□□ -1.36
PDLIM1-203ENST00000490391 TMEM171Q8WVE6 324 aa6.53□□□□□ -1.36
PDLIM1-203ENST00000490391 RERGQ96A58 199 aaPredicted RBP6.53□□□□□ -1.36
PDLIM1-203ENST00000490391 HSPBAP1Q96EW2 488 aa6.53□□□□□ -1.36
PDLIM1-203ENST00000490391 PEX11GQ96HA9 241 aa6.53□□□□□ -1.36
PDLIM1-203ENST00000490391 WFIKKN1Q96NZ8 548 aa6.53□□□□□ -1.36
PDLIM1-203ENST00000490391 MACROD1Q9BQ69 325 aa6.53□□□□□ -1.36
PDLIM1-203ENST00000490391 APOL2Q9BQE5 337 aa6.53□□□□□ -1.36
PDLIM1-203ENST00000490391 FSD1LQ9BXM9 530 aa6.53□□□□□ -1.36
PDLIM1-203ENST00000490391 ANGPTL4Q9BY76 406 aa6.53□□□□□ -1.36
PDLIM1-203ENST00000490391 SLC6A15Q9H2J7 730 aa6.53□□□□□ -1.36
PDLIM1-203ENST00000490391 CXorf56Q9H5V9 222 aa6.53□□□□□ -1.36
PDLIM1-203ENST00000490391 HAUS4Q9H6D7 363 aa6.53□□□□□ -1.36
PDLIM1-203ENST00000490391 ESRP2Q9H6T0 727 aaKnown RBP6.53□□□□□ -1.36
PDLIM1-203ENST00000490391 ZNF703Q9H7S9 590 aaPredicted RBP6.53□□□□□ -1.36
PDLIM1-203ENST00000490391 MRPS30Q9NP92 439 aaKnown RBP6.53□□□□□ -1.36
PDLIM1-203ENST00000490391 HPF1Q9NWY4 346 aa6.53□□□□□ -1.36
PDLIM1-203ENST00000490391 LPAR3Q9UBY5 353 aa6.53□□□□□ -1.36
PDLIM1-203ENST00000490391 PCYOX1Q9UHG3 505 aa6.53□□□□□ -1.36
PDLIM1-203ENST00000490391 PPIEQ9UNP9 301 aaKnown RBP6.53□□□□□ -1.36
PDLIM1-203ENST00000490391 ERVK-11Q9UQG0 969 aa6.53□□□□□ -1.36
PDLIM1-203ENST00000490391 RUVBL2Q9Y230 463 aaKnown RBP6.53□□□□□ -1.36
PDLIM1-203ENST00000490391 YARS2Q9Y2Z4 477 aaKnown RBP6.53□□□□□ -1.36
PDLIM1-203ENST00000490391 PLCE1Q9P212 2302 aa6.53□□□□□ -1.36
PDLIM1-203ENST00000490391 TENM3Q9P273 2699 aa6.52□□□□□ -1.37
PDLIM1-203ENST00000490391 TCRBV16S1A1N1A0A5B0 115 aa6.52□□□□□ -1.37
PDLIM1-203ENST00000490391 ZNF860A6NHJ4 632 aa6.52□□□□□ -1.37
PDLIM1-203ENST00000490391 CD8B2A6NJW9 211 aa6.52□□□□□ -1.37
PDLIM1-203ENST00000490391 APOL1O14791 398 aa6.52□□□□□ -1.37
PDLIM1-203ENST00000490391 OR1I1O60431 355 aa6.52□□□□□ -1.37
PDLIM1-203ENST00000490391 ZNF354AO60765 605 aaPredicted RBP6.52□□□□□ -1.37
PDLIM1-203ENST00000490391 OR2J2O76002 312 aa6.52□□□□□ -1.37
PDLIM1-203ENST00000490391 CRTAMO95727 393 aa6.52□□□□□ -1.37
PDLIM1-203ENST00000490391 FHP07954 510 aa6.52□□□□□ -1.37
PDLIM1-203ENST00000490391 OR56A5P0C7T3 313 aa6.52□□□□□ -1.37
PDLIM1-203ENST00000490391 PKMP14618 531 aaKnown RBP6.52□□□□□ -1.37
PDLIM1-203ENST00000490391 CNR1P21554 472 aa6.52□□□□□ -1.37
PDLIM1-203ENST00000490391 IL10P22301 178 aa6.52□□□□□ -1.37
PDLIM1-203ENST00000490391 CCKARP32238 428 aa6.52□□□□□ -1.37
PDLIM1-203ENST00000490391 FOXN2P32314 431 aa6.52□□□□□ -1.37
PDLIM1-203ENST00000490391 SOX3P41225 446 aa6.52□□□□□ -1.37
PDLIM1-203ENST00000490391 CLCN2P51788 898 aa6.52□□□□□ -1.37
PDLIM1-203ENST00000490391 DEFA6Q01524 100 aa6.52□□□□□ -1.37
PDLIM1-203ENST00000490391 PRDX1Q06830 199 aaKnown RBP6.52□□□□□ -1.37
PDLIM1-203ENST00000490391 CRYZQ08257 329 aaKnown RBP6.52□□□□□ -1.37
PDLIM1-203ENST00000490391 IL20RBQ6UXL0 311 aa6.52□□□□□ -1.37
PDLIM1-203ENST00000490391 C12orf54Q6X4T0 127 aa6.52□□□□□ -1.37
PDLIM1-203ENST00000490391 LUZP2Q86TE4 346 aa6.52□□□□□ -1.37
PDLIM1-203ENST00000490391 HSCBQ8IWL3 235 aa6.52□□□□□ -1.37
PDLIM1-203ENST00000490391 ARIH2OSQ8N7S6 290 aa6.52□□□□□ -1.37
PDLIM1-203ENST00000490391 B3GNT7Q8NFL0 401 aa6.52□□□□□ -1.37
PDLIM1-203ENST00000490391 MCOLN3Q8TDD5 553 aa6.52□□□□□ -1.37
PDLIM1-203ENST00000490391 UBASH3BQ8TF42 649 aa6.52□□□□□ -1.37
PDLIM1-203ENST00000490391 ASZ1Q8WWH4 475 aa6.52□□□□□ -1.37
PDLIM1-203ENST00000490391 ZMYND19Q96E35 227 aaPredicted RBP6.52□□□□□ -1.37
PDLIM1-203ENST00000490391 CDKN2AIPNLQ96HQ2 116 aa6.52□□□□□ -1.37
PDLIM1-203ENST00000490391 SCYL1Q96KG9 808 aa6.52□□□□□ -1.37
PDLIM1-203ENST00000490391 ERGIC2Q96RQ1 377 aa6.52□□□□□ -1.37
PDLIM1-203ENST00000490391 RASL10BQ96S79 203 aa6.52□□□□□ -1.37
PDLIM1-203ENST00000490391 PRDM14Q9GZV8 571 aa6.52□□□□□ -1.37
PDLIM1-203ENST00000490391 ACKR4Q9NPB9 350 aa6.52□□□□□ -1.37
PDLIM1-203ENST00000490391 NLE1Q9NVX2 485 aaPredicted RBP6.52□□□□□ -1.37
PDLIM1-203ENST00000490391 KLHL28Q9NXS3 571 aa6.52□□□□□ -1.37
PDLIM1-203ENST00000490391 PSD3Q9NYI0 1048 aa6.52□□□□□ -1.37
PDLIM1-203ENST00000490391 KLHL8Q9P2G9 620 aaPredicted RBP6.52□□□□□ -1.37
PDLIM1-203ENST00000490391 NDRG3Q9UGV2 375 aa6.52□□□□□ -1.37
PDLIM1-203ENST00000490391 FBXW2Q9UKT8 454 aa6.52□□□□□ -1.37
PDLIM1-203ENST00000490391 ATG4BQ9Y4P1 393 aa6.52□□□□□ -1.37
PDLIM1-203ENST00000490391 OR51F1A6NGY5 319 aa6.51□□□□□ -1.37
PDLIM1-203ENST00000490391 LRRC3CA6NJW4 275 aa6.51□□□□□ -1.37
PDLIM1-203ENST00000490391 LGALS16A8MUM7 142 aa6.51□□□□□ -1.37
PDLIM1-203ENST00000490391 OVOL3O00110 214 aa6.51□□□□□ -1.37
PDLIM1-203ENST00000490391 MYO1FO00160 1098 aa6.51□□□□□ -1.37
PDLIM1-203ENST00000490391 ADAM11O75078 769 aa6.51□□□□□ -1.37
PDLIM1-203ENST00000490391 PROSCO94903 275 aa6.51□□□□□ -1.37
PDLIM1-203ENST00000490391 CYP1A2P05177 515 aa6.51□□□□□ -1.37
PDLIM1-203ENST00000490391 CCL3P10147 92 aa6.51□□□□□ -1.37
PDLIM1-203ENST00000490391 PECAM1P16284 738 aaPredicted RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms