RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 NME5P56597 212 aa3.28□□□□□ -1.88
CD46-216ENST00000490278 C17orf67Q0P5P2 114 aa3.28□□□□□ -1.88
CD46-216ENST00000490278 TEFQ10587 303 aa3.28□□□□□ -1.88
CD46-216ENST00000490278 RPS6KA1Q15418 735 aa3.28□□□□□ -1.88
CD46-216ENST00000490278 STXBP2Q15833 593 aa3.28□□□□□ -1.88
CD46-216ENST00000490278 SLC39A12Q504Y0 691 aa3.28□□□□□ -1.88
CD46-216ENST00000490278 TAF1BQ53T94 588 aaPredicted RBP3.28□□□□□ -1.88
CD46-216ENST00000490278 PRAMEF8Q5VWM4 474 aa3.28□□□□□ -1.88
CD46-216ENST00000490278 LYPLAL1Q5VWZ2 237 aa3.28□□□□□ -1.88
CD46-216ENST00000490278 KCTD11Q693B1 232 aa3.28□□□□□ -1.88
CD46-216ENST00000490278 METTL7BQ6UX53 244 aa3.28□□□□□ -1.88
CD46-216ENST00000490278 GDPGP1Q6ZNW5 385 aa3.28□□□□□ -1.88
CD46-216ENST00000490278 Q71RC1 249 aaPredicted RBP3.28□□□□□ -1.88
CD46-216ENST00000490278 NLRP14Q86W24 1093 aa3.28□□□□□ -1.88
CD46-216ENST00000490278 TMEM126BQ8IUX1 230 aa3.28□□□□□ -1.88
CD46-216ENST00000490278 THEM5Q8N1Q8 247 aa3.28□□□□□ -1.88
CD46-216ENST00000490278 Q8NBF4 154 aa3.28□□□□□ -1.88
CD46-216ENST00000490278 OR52B6Q8NGF0 335 aa3.28□□□□□ -1.88
CD46-216ENST00000490278 ULK4Q96C45 1275 aa3.28□□□□□ -1.88
CD46-216ENST00000490278 ZNF689Q96CS4 500 aaPredicted RBP3.28□□□□□ -1.88
CD46-216ENST00000490278 EPSTI1Q96J88 318 aa3.28□□□□□ -1.88
CD46-216ENST00000490278 PKP2Q99959 881 aa3.28□□□□□ -1.88
CD46-216ENST00000490278 OSBPL8Q9BZF1 889 aa3.28□□□□□ -1.88
CD46-216ENST00000490278 TRIM15Q9C019 465 aa3.28□□□□□ -1.88
CD46-216ENST00000490278 ZDHHC6Q9H6R6 413 aa3.28□□□□□ -1.88
CD46-216ENST00000490278 PNPLA3Q9NST1 481 aa3.28□□□□□ -1.88
CD46-216ENST00000490278 FBXW2Q9UKT8 454 aa3.28□□□□□ -1.88
CD46-216ENST00000490278 MRPS18CQ9Y3D5 142 aaKnown RBP3.28□□□□□ -1.88
CD46-216ENST00000490278 ETV7Q9Y603 341 aa3.28□□□□□ -1.88
CD46-216ENST00000490278 SNED1Q8TER0 1413 aa3.27□□□□□ -1.89
CD46-216ENST00000490278 IGHV3-20A0A0C4DH32 117 aa3.27□□□□□ -1.89
CD46-216ENST00000490278 TMEM129A0AVI4 362 aa3.27□□□□□ -1.89
CD46-216ENST00000490278 CACNB4O00305 520 aaPredicted RBP3.27□□□□□ -1.89
CD46-216ENST00000490278 TRAFD1O14545 582 aaPredicted RBP3.27□□□□□ -1.89
CD46-216ENST00000490278 INPP4BO15327 924 aa3.27□□□□□ -1.89
CD46-216ENST00000490278 P2RX6O15547 441 aa3.27□□□□□ -1.89
CD46-216ENST00000490278 SYT7O43581 403 aa3.27□□□□□ -1.89
CD46-216ENST00000490278 RTN2O75298 545 aa3.27□□□□□ -1.89
CD46-216ENST00000490278 AKAP3O75969 853 aa3.27□□□□□ -1.89
CD46-216ENST00000490278 SORBS2O94875 1100 aaKnown RBP3.27□□□□□ -1.89
CD46-216ENST00000490278 ANGPTL1O95841 491 aa3.27□□□□□ -1.89
CD46-216ENST00000490278 THEGLP0DJG4 465 aa3.27□□□□□ -1.89
CD46-216ENST00000490278 ODC1P11926 461 aa3.27□□□□□ -1.89
CD46-216ENST00000490278 SKILP12757 684 aa3.27□□□□□ -1.89
CD46-216ENST00000490278 OAS2P29728 719 aaKnown RBP3.27□□□□□ -1.89
CD46-216ENST00000490278 PKLRP30613 574 aa3.27□□□□□ -1.89
CD46-216ENST00000490278 ADARP55265 1226 aaKnown RBP3.27□□□□□ -1.89
CD46-216ENST00000490278 EVCP57679 992 aa3.27□□□□□ -1.89
CD46-216ENST00000490278 KIAA1024LP59773 190 aa3.27□□□□□ -1.89
CD46-216ENST00000490278 ELAVL2Q12926 359 aaKnown RBP3.27□□□□□ -1.89
CD46-216ENST00000490278 KIAA0141Q14154 515 aaPredicted RBP3.27□□□□□ -1.89
CD46-216ENST00000490278 LY6DQ14210 128 aa3.27□□□□□ -1.89
CD46-216ENST00000490278 GCKRQ14397 625 aa3.27□□□□□ -1.89
CD46-216ENST00000490278 C3AR1Q16581 482 aa3.27□□□□□ -1.89
CD46-216ENST00000490278 SGCBQ16585 318 aa3.27□□□□□ -1.89
CD46-216ENST00000490278 AARDQ4LEZ3 155 aa3.27□□□□□ -1.89
CD46-216ENST00000490278 IFI44LQ53G44 452 aa3.27□□□□□ -1.89
CD46-216ENST00000490278 DOK6Q6PKX4 331 aa3.27□□□□□ -1.89
CD46-216ENST00000490278 TMEM64Q6YI46 380 aa3.27□□□□□ -1.89
CD46-216ENST00000490278 STXBP4Q6ZWJ1 553 aa3.27□□□□□ -1.89
CD46-216ENST00000490278 CYP4V2Q6ZWL3 525 aaPredicted RBP3.27□□□□□ -1.89
CD46-216ENST00000490278 ZNF440Q8IYI8 595 aa3.27□□□□□ -1.89
CD46-216ENST00000490278 LPCAT1Q8NF37 534 aa3.27□□□□□ -1.89
CD46-216ENST00000490278 PSMA8Q8TAA3 256 aa3.27□□□□□ -1.89
CD46-216ENST00000490278 SPATA18Q8TC71 538 aa3.27□□□□□ -1.89
CD46-216ENST00000490278 GANCQ8TET4 914 aa3.27□□□□□ -1.89
CD46-216ENST00000490278 BCL2L2Q92843 193 aaPredicted RBP3.27□□□□□ -1.89
CD46-216ENST00000490278 ZNF274Q96GC6 653 aaPredicted RBP3.27□□□□□ -1.89
CD46-216ENST00000490278 VGLL1Q99990 258 aa3.27□□□□□ -1.89
CD46-216ENST00000490278 CABLES2Q9BTV7 478 aa3.27□□□□□ -1.89
CD46-216ENST00000490278 LRRC61Q9BV99 259 aa3.27□□□□□ -1.89
CD46-216ENST00000490278 PARLQ9H300 379 aa3.27□□□□□ -1.89
CD46-216ENST00000490278 ZNF319Q9P2F9 582 aa3.27□□□□□ -1.89
CD46-216ENST00000490278 MTRRQ9UBK8 725 aa3.27□□□□□ -1.89
CD46-216ENST00000490278 PILRAQ9UKJ1 303 aa3.27□□□□□ -1.89
CD46-216ENST00000490278 IGHV4-30-2A0A087WSY4 118 aa3.26□□□□□ -1.89
CD46-216ENST00000490278 IGHV3-38A0A0C4DH36 116 aa3.26□□□□□ -1.89
CD46-216ENST00000490278 ASB14A6NK59 587 aa3.26□□□□□ -1.89
CD46-216ENST00000490278 A8MU76 341 aa3.26□□□□□ -1.89
CD46-216ENST00000490278 E9PQ18 207 aa3.26□□□□□ -1.89
CD46-216ENST00000490278 CHUKO15111 745 aa3.26□□□□□ -1.89
CD46-216ENST00000490278 GAS8O95995 478 aa3.26□□□□□ -1.89
CD46-216ENST00000490278 GSTA2P09210 222 aa3.26□□□□□ -1.89
CD46-216ENST00000490278 ATP6V1B1P15313 513 aa3.26□□□□□ -1.89
CD46-216ENST00000490278 SELEP16581 610 aa3.26□□□□□ -1.89
CD46-216ENST00000490278 GJB2P29033 226 aa3.26□□□□□ -1.89
CD46-216ENST00000490278 BACE1P56817 501 aa3.26□□□□□ -1.89
CD46-216ENST00000490278 LCP2Q13094 533 aa3.26□□□□□ -1.89
CD46-216ENST00000490278 UPP1Q16831 310 aa3.26□□□□□ -1.89
CD46-216ENST00000490278 MS4A18Q3C1V0 323 aa3.26□□□□□ -1.89
CD46-216ENST00000490278 SNRNP48Q6IEG0 339 aaKnown RBP3.26□□□□□ -1.89
CD46-216ENST00000490278 ALKBH5Q6P6C2 394 aaKnown RBP3.26□□□□□ -1.89
CD46-216ENST00000490278 PRSS42Q7Z5A4 293 aa3.26□□□□□ -1.89
CD46-216ENST00000490278 SNX32Q86XE0 403 aa3.26□□□□□ -1.89
CD46-216ENST00000490278 NAT8LQ8N9F0 302 aa3.26□□□□□ -1.89
CD46-216ENST00000490278 MSANTD4Q8NCY6 345 aa3.26□□□□□ -1.89
CD46-216ENST00000490278 C8orf46Q8TAG6 207 aa3.26□□□□□ -1.89
CD46-216ENST00000490278 LRRC15Q8TF66 581 aa3.26□□□□□ -1.89
CD46-216ENST00000490278 CFAP36Q96G28 342 aa3.26□□□□□ -1.89
CD46-216ENST00000490278 SLC45A3Q96JT2 553 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms