RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 PIGQQ9BRB3 760 aa8.46□□□□□ -1.06
SSBP1-212ENST00000489378 AARSD1Q9BTE6 412 aaKnown RBP8.46□□□□□ -1.06
SSBP1-212ENST00000489378 KRTAP4-8Q9BYQ9 185 aa8.46□□□□□ -1.06
SSBP1-212ENST00000489378 NECTIN3Q9NQS3 549 aa8.46□□□□□ -1.06
SSBP1-212ENST00000489378 GALNT8Q9NY28 637 aa8.46□□□□□ -1.06
SSBP1-212ENST00000489378 ELOA3CA0A087WX78 387 aaPredicted RBP8.45□□□□□ -1.06
SSBP1-212ENST00000489378 ELOA3DA6NLF2 546 aaPredicted RBP8.45□□□□□ -1.06
SSBP1-212ENST00000489378 DEFB108AA8MXU0 73 aa8.45□□□□□ -1.06
SSBP1-212ENST00000489378 E7ENX8 843 aa8.45□□□□□ -1.06
SSBP1-212ENST00000489378 CASKO14936 926 aa8.45□□□□□ -1.06
SSBP1-212ENST00000489378 TPD52L2O43399 206 aaKnown RBP8.45□□□□□ -1.06
SSBP1-212ENST00000489378 TLX2O43763 284 aaPredicted RBP8.45□□□□□ -1.06
SSBP1-212ENST00000489378 MATN4O95460 622 aa8.45□□□□□ -1.06
SSBP1-212ENST00000489378 RFPL3SP0C7P2 107 aa8.45□□□□□ -1.06
SSBP1-212ENST00000489378 JAK1P23458 1154 aa8.45□□□□□ -1.06
SSBP1-212ENST00000489378 COILP38432 576 aaPredicted RBP8.45□□□□□ -1.06
SSBP1-212ENST00000489378 TRPC1P48995 793 aa8.45□□□□□ -1.06
SSBP1-212ENST00000489378 ADARP55265 1226 aaKnown RBP8.45□□□□□ -1.06
SSBP1-212ENST00000489378 RPS15AP62244 130 aaKnown RBP8.45□□□□□ -1.06
SSBP1-212ENST00000489378 MEF2AQ02078 507 aaPredicted RBP8.45□□□□□ -1.06
SSBP1-212ENST00000489378 TAP2Q03519 686 aa8.45□□□□□ -1.06
SSBP1-212ENST00000489378 ARHGAP19Q14CB8 494 aa8.45□□□□□ -1.06
SSBP1-212ENST00000489378 SIX1Q15475 284 aaPredicted RBP8.45□□□□□ -1.06
SSBP1-212ENST00000489378 ELOA3BQ3SY89 546 aa8.45□□□□□ -1.06
SSBP1-212ENST00000489378 PTRHD1Q6GMV3 140 aaKnown RBP8.45□□□□□ -1.06
SSBP1-212ENST00000489378 AFTPHQ6ULP2 937 aa8.45□□□□□ -1.06
SSBP1-212ENST00000489378 RTL4Q6ZR62 310 aa8.45□□□□□ -1.06
SSBP1-212ENST00000489378 QSOX2Q6ZRP7 698 aa8.45□□□□□ -1.06
SSBP1-212ENST00000489378 FAM47EQ6ZV65 393 aa8.45□□□□□ -1.06
SSBP1-212ENST00000489378 OTOAQ7RTW8 1153 aa8.45□□□□□ -1.06
SSBP1-212ENST00000489378 SLC26A11Q86WA9 606 aa8.45□□□□□ -1.06
SSBP1-212ENST00000489378 LACC1Q8IV20 430 aa8.45□□□□□ -1.06
SSBP1-212ENST00000489378 AFAP1L2Q8N4X5 818 aa8.45□□□□□ -1.06
SSBP1-212ENST00000489378 CAMKVQ8NCB2 501 aa8.45□□□□□ -1.06
SSBP1-212ENST00000489378 FBXO15Q8NCQ5 510 aaPredicted RBP8.45□□□□□ -1.06
SSBP1-212ENST00000489378 ELOA3Q8NG57 546 aa8.45□□□□□ -1.06
SSBP1-212ENST00000489378 OR4L1Q8NH43 312 aa8.45□□□□□ -1.06
SSBP1-212ENST00000489378 ZNF480Q8WV37 535 aa8.45□□□□□ -1.06
SSBP1-212ENST00000489378 NCLNQ969V3 563 aa8.45□□□□□ -1.06
SSBP1-212ENST00000489378 SCYL1Q96KG9 808 aa8.45□□□□□ -1.06
SSBP1-212ENST00000489378 RASL10BQ96S79 203 aa8.45□□□□□ -1.06
SSBP1-212ENST00000489378 EBNA1BP2Q99848 306 aaKnown RBP8.45□□□□□ -1.06
SSBP1-212ENST00000489378 RBM24Q9BX46 236 aaKnown RBP8.45□□□□□ -1.06
SSBP1-212ENST00000489378 HEMGNQ9BXL5 484 aa8.45□□□□□ -1.06
SSBP1-212ENST00000489378 CHMP5Q9NZZ3 219 aa8.45□□□□□ -1.06
SSBP1-212ENST00000489378 MARCH4Q9P2E8 410 aaPredicted RBP8.45□□□□□ -1.06
SSBP1-212ENST00000489378 TESMINQ9Y4I5 508 aa8.45□□□□□ -1.06
SSBP1-212ENST00000489378 PCDHGB3Q9Y5G1 929 aa8.45□□□□□ -1.06
SSBP1-212ENST00000489378 SLC22A7Q9Y694 548 aa8.45□□□□□ -1.06
SSBP1-212ENST00000489378 NINQ8N4C6 2090 aa8.44□□□□□ -1.06
SSBP1-212ENST00000489378 MED12Q93074 2177 aa8.44□□□□□ -1.06
SSBP1-212ENST00000489378 AHRRA9YTQ3 701 aa8.44□□□□□ -1.06
SSBP1-212ENST00000489378 WWP2O00308 870 aa8.44□□□□□ -1.06
SSBP1-212ENST00000489378 PRMT5O14744 637 aaPredicted RBP8.44□□□□□ -1.06
SSBP1-212ENST00000489378 CD5LO43866 347 aa8.44□□□□□ -1.06
SSBP1-212ENST00000489378 LCMT2O60294 686 aaKnown RBP8.44□□□□□ -1.06
SSBP1-212ENST00000489378 GALR3O60755 368 aaPredicted RBP8.44□□□□□ -1.06
SSBP1-212ENST00000489378 ZNF354AO60765 605 aaPredicted RBP8.44□□□□□ -1.06
SSBP1-212ENST00000489378 SLC16A8O95907 504 aa8.44□□□□□ -1.06
SSBP1-212ENST00000489378 TP53P04637 393 aaPredicted RBP8.44□□□□□ -1.06
SSBP1-212ENST00000489378 FAM157CP0CG43 387 aa8.44□□□□□ -1.06
SSBP1-212ENST00000489378 CCL3P10147 92 aa8.44□□□□□ -1.06
SSBP1-212ENST00000489378 COMTP21964 271 aa8.44□□□□□ -1.06
SSBP1-212ENST00000489378 CTSSP25774 331 aa8.44□□□□□ -1.06
SSBP1-212ENST00000489378 PPP2R1BP30154 601 aa8.44□□□□□ -1.06
SSBP1-212ENST00000489378 GPR143P51810 404 aa8.44□□□□□ -1.06
SSBP1-212ENST00000489378 DOC2BQ14184 412 aa8.44□□□□□ -1.06
SSBP1-212ENST00000489378 DEFB134Q4QY38 66 aa8.44□□□□□ -1.06
SSBP1-212ENST00000489378 MEI1Q5TIA1 1274 aa8.44□□□□□ -1.06
SSBP1-212ENST00000489378 C20orf204Q6ZNR8 217 aa8.44□□□□□ -1.06
SSBP1-212ENST00000489378 ASPGQ86U10 573 aa8.44□□□□□ -1.06
SSBP1-212ENST00000489378 LRRC56Q8IYG6 542 aaPredicted RBP8.44□□□□□ -1.06
SSBP1-212ENST00000489378 ZNF740Q8NDX6 193 aa8.44□□□□□ -1.06
SSBP1-212ENST00000489378 SLC13A3Q8WWT9 602 aa8.44□□□□□ -1.06
SSBP1-212ENST00000489378 IGFBPL1Q8WX77 278 aa8.44□□□□□ -1.06
SSBP1-212ENST00000489378 FAM136AQ96C01 138 aa8.44□□□□□ -1.06
SSBP1-212ENST00000489378 PIK3IP1Q96FE7 263 aa8.44□□□□□ -1.06
SSBP1-212ENST00000489378 VMP1Q96GC9 406 aa8.44□□□□□ -1.06
SSBP1-212ENST00000489378 ZNF778Q96MU6 729 aa8.44□□□□□ -1.06
SSBP1-212ENST00000489378 FAM118BQ9BPY3 351 aa8.44□□□□□ -1.06
SSBP1-212ENST00000489378 P2RY12Q9H244 342 aa8.44□□□□□ -1.06
SSBP1-212ENST00000489378 ZNF703Q9H7S9 590 aaPredicted RBP8.44□□□□□ -1.06
SSBP1-212ENST00000489378 PPIEQ9UNP9 301 aaKnown RBP8.44□□□□□ -1.06
SSBP1-212ENST00000489378 SH2B3Q9UQQ2 575 aa8.44□□□□□ -1.06
SSBP1-212ENST00000489378 ATG4BQ9Y4P1 393 aa8.44□□□□□ -1.06
SSBP1-212ENST00000489378 ADARB2-AS1A8MUL3 147 aa8.43□□□□□ -1.06
SSBP1-212ENST00000489378 CTIFO43310 598 aaKnown RBP8.43□□□□□ -1.06
SSBP1-212ENST00000489378 SPRY1O43609 319 aaPredicted RBP8.43□□□□□ -1.06
SSBP1-212ENST00000489378 ZFAND5O76080 213 aa8.43□□□□□ -1.06
SSBP1-212ENST00000489378 METTL18O95568 372 aa8.43□□□□□ -1.06
SSBP1-212ENST00000489378 TMEM253P0C7T8 217 aa8.43□□□□□ -1.06
SSBP1-212ENST00000489378 PAX1P15863 534 aa8.43□□□□□ -1.06
SSBP1-212ENST00000489378 CTNNA2P26232 953 aa8.43□□□□□ -1.06
SSBP1-212ENST00000489378 OPRM1P35372 400 aa8.43□□□□□ -1.06
SSBP1-212ENST00000489378 PIGAP37287 484 aa8.43□□□□□ -1.06
SSBP1-212ENST00000489378 GBX1Q14549 363 aa8.43□□□□□ -1.06
SSBP1-212ENST00000489378 HERC3Q15034 1050 aa8.43□□□□□ -1.06
SSBP1-212ENST00000489378 FASTKD1Q53R41 847 aaKnown RBP8.43□□□□□ -1.06
SSBP1-212ENST00000489378 CTSL3PQ5NE16 218 aa8.43□□□□□ -1.06
SSBP1-212ENST00000489378 TSTD2Q5T7W7 516 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms