RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 SNX19Q92543 992 aa8.1□□□□□ -1.11
VTI1A-207ENST00000489357 TMBIM1Q969X1 311 aa8.1□□□□□ -1.11
VTI1A-207ENST00000489357 MAGED4Q96JG8 741 aa8.1□□□□□ -1.11
VTI1A-207ENST00000489357 AIF1LQ9BQI0 150 aa8.1□□□□□ -1.11
VTI1A-207ENST00000489357 TRIM8Q9BZR9 551 aa8.1□□□□□ -1.11
VTI1A-207ENST00000489357 ZDHHC5Q9C0B5 715 aa8.1□□□□□ -1.11
VTI1A-207ENST00000489357 TRIT1Q9H3H1 467 aaKnown RBP8.1□□□□□ -1.11
VTI1A-207ENST00000489357 IKZF5Q9H5V7 419 aa8.1□□□□□ -1.11
VTI1A-207ENST00000489357 TMEM38AQ9H6F2 299 aa8.1□□□□□ -1.11
VTI1A-207ENST00000489357 TM9SF3Q9HD45 589 aa8.1□□□□□ -1.11
VTI1A-207ENST00000489357 PHPT1Q9NRX4 125 aaPredicted RBP8.1□□□□□ -1.11
VTI1A-207ENST00000489357 ADAM29Q9UKF5 820 aa8.1□□□□□ -1.11
VTI1A-207ENST00000489357 BAG5Q9UL15 447 aa8.1□□□□□ -1.11
VTI1A-207ENST00000489357 ASF1AQ9Y294 204 aa8.1□□□□□ -1.11
VTI1A-207ENST00000489357 STON1Q9Y6Q2 735 aa8.1□□□□□ -1.11
VTI1A-207ENST00000489357 KNL1Q8NG31 2342 aa8.1□□□□□ -1.11
VTI1A-207ENST00000489357 GVINP1Q7Z2Y8 2422 aa8.1□□□□□ -1.11
VTI1A-207ENST00000489357 TNRC6BQ9UPQ9 1833 aaKnown RBP8.09□□□□□ -1.11
VTI1A-207ENST00000489357 GNG14A0A1W2PPG7 69 aa8.09□□□□□ -1.11
VTI1A-207ENST00000489357 FAM149AA5PLN7 773 aa8.09□□□□□ -1.11
VTI1A-207ENST00000489357 GABRR3A8MPY1 467 aa8.09□□□□□ -1.11
VTI1A-207ENST00000489357 A8MVJ9 347 aa8.09□□□□□ -1.11
VTI1A-207ENST00000489357 PDLIM1O00151 329 aa8.09□□□□□ -1.11
VTI1A-207ENST00000489357 CACNB4O00305 520 aaPredicted RBP8.09□□□□□ -1.11
VTI1A-207ENST00000489357 SLC16A6O15403 523 aa8.09□□□□□ -1.11
VTI1A-207ENST00000489357 LAMTOR5O43504 91 aa8.09□□□□□ -1.11
VTI1A-207ENST00000489357 PGM3O95394 542 aa8.09□□□□□ -1.11
VTI1A-207ENST00000489357 KRT75O95678 551 aa8.09□□□□□ -1.11
VTI1A-207ENST00000489357 SERPINA1P01009 418 aa8.09□□□□□ -1.11
VTI1A-207ENST00000489357 SEMG1P04279 462 aa8.09□□□□□ -1.11
VTI1A-207ENST00000489357 SLC35G4P0C7Q5 338 aa8.09□□□□□ -1.11
VTI1A-207ENST00000489357 ITGAMP11215 1152 aa8.09□□□□□ -1.11
VTI1A-207ENST00000489357 PCNAP12004 261 aa8.09□□□□□ -1.11
VTI1A-207ENST00000489357 MYCLP1P12525 358 aaPredicted RBP8.09□□□□□ -1.11
VTI1A-207ENST00000489357 HLA-EP13747 358 aa8.09□□□□□ -1.11
VTI1A-207ENST00000489357 ENGP17813 658 aa8.09□□□□□ -1.11
VTI1A-207ENST00000489357 IDSP22304 550 aa8.09□□□□□ -1.11
VTI1A-207ENST00000489357 GRNP28799 593 aaKnown RBP8.09□□□□□ -1.11
VTI1A-207ENST00000489357 PBLDP30039 288 aaPredicted RBP8.09□□□□□ -1.11
VTI1A-207ENST00000489357 KDELR2P33947 212 aa8.09□□□□□ -1.11
VTI1A-207ENST00000489357 RYKP34925 604 aa8.09□□□□□ -1.11
VTI1A-207ENST00000489357 CNR2P34972 360 aa8.09□□□□□ -1.11
VTI1A-207ENST00000489357 PCGF2P35227 344 aa8.09□□□□□ -1.11
VTI1A-207ENST00000489357 DRD3P35462 400 aa8.09□□□□□ -1.11
VTI1A-207ENST00000489357 NBL1P41271 181 aa8.09□□□□□ -1.11
VTI1A-207ENST00000489357 HLCSP50747 726 aa8.09□□□□□ -1.11
VTI1A-207ENST00000489357 TRA2BP62995 288 aaKnown RBP8.09□□□□□ -1.11
VTI1A-207ENST00000489357 TUBA3CQ13748 450 aa8.09□□□□□ -1.11
VTI1A-207ENST00000489357 RBBP5Q15291 538 aaKnown RBP8.09□□□□□ -1.11
VTI1A-207ENST00000489357 POM121L1PQ3SYA9 428 aa8.09□□□□□ -1.11
VTI1A-207ENST00000489357 ZNF648Q5T619 568 aaPredicted RBP8.09□□□□□ -1.11
VTI1A-207ENST00000489357 AGBL4Q5VU57 503 aa8.09□□□□□ -1.11
VTI1A-207ENST00000489357 TRIM40Q6P9F5 258 aa8.09□□□□□ -1.11
VTI1A-207ENST00000489357 DOK6Q6PKX4 331 aa8.09□□□□□ -1.11
VTI1A-207ENST00000489357 DNAJC14Q6Y2X3 702 aaPredicted RBP8.09□□□□□ -1.11
VTI1A-207ENST00000489357 CBLL1Q75N03 491 aa8.09□□□□□ -1.11
VTI1A-207ENST00000489357 COMMD6Q7Z4G1 85 aa8.09□□□□□ -1.11
VTI1A-207ENST00000489357 THAP5Q7Z6K1 395 aa8.09□□□□□ -1.11
VTI1A-207ENST00000489357 STK32CQ86UX6 486 aa8.09□□□□□ -1.11
VTI1A-207ENST00000489357 ATCAYQ86WG3 371 aa8.09□□□□□ -1.11
VTI1A-207ENST00000489357 C17orf64Q86WR6 236 aa8.09□□□□□ -1.11
VTI1A-207ENST00000489357 FAM129CQ86XR2 697 aa8.09□□□□□ -1.11
VTI1A-207ENST00000489357 ZZZ3Q8IYH5 903 aa8.09□□□□□ -1.11
VTI1A-207ENST00000489357 C8orf59Q8N0T1 100 aaPredicted RBP8.09□□□□□ -1.11
VTI1A-207ENST00000489357 ZNF513Q8N8E2 541 aaPredicted RBP8.09□□□□□ -1.11
VTI1A-207ENST00000489357 C11orf65Q8NCR3 313 aa8.09□□□□□ -1.11
VTI1A-207ENST00000489357 SETD9Q8NE22 299 aa8.09□□□□□ -1.11
VTI1A-207ENST00000489357 OR4K1Q8NGD4 311 aa8.09□□□□□ -1.11
VTI1A-207ENST00000489357 FBXO30Q8TB52 745 aa8.09□□□□□ -1.11
VTI1A-207ENST00000489357 ZFP90Q8TF47 636 aa8.09□□□□□ -1.11
VTI1A-207ENST00000489357 CYGBQ8WWM9 190 aa8.09□□□□□ -1.11
VTI1A-207ENST00000489357 TFGQ92734 400 aaPredicted RBP8.09□□□□□ -1.11
VTI1A-207ENST00000489357 HDAC2Q92769 488 aaKnown RBP8.09□□□□□ -1.11
VTI1A-207ENST00000489357 GFM2Q969S9 779 aaKnown RBP8.09□□□□□ -1.11
VTI1A-207ENST00000489357 PPCDCQ96CD2 204 aa8.09□□□□□ -1.11
VTI1A-207ENST00000489357 EGLN2Q96KS0 407 aa8.09□□□□□ -1.11
VTI1A-207ENST00000489357 INPP5KQ9BT40 448 aa8.09□□□□□ -1.11
VTI1A-207ENST00000489357 TRIM4Q9C037 500 aa8.09□□□□□ -1.11
VTI1A-207ENST00000489357 CHST8Q9H2A9 424 aa8.09□□□□□ -1.11
VTI1A-207ENST00000489357 WDR26Q9H7D7 661 aa8.09□□□□□ -1.11
VTI1A-207ENST00000489357 CAAP1Q9H8G2 361 aa8.09□□□□□ -1.11
VTI1A-207ENST00000489357 TPT1P8Q9HAU6 139 aa8.09□□□□□ -1.11
VTI1A-207ENST00000489357 PREBQ9HCU5 417 aa8.09□□□□□ -1.11
VTI1A-207ENST00000489357 ZDHHC4Q9NPG8 344 aa8.09□□□□□ -1.11
VTI1A-207ENST00000489357 ADPRHL2Q9NX46 363 aa8.09□□□□□ -1.11
VTI1A-207ENST00000489357 THUMPD1Q9NXG2 353 aaKnown RBP8.09□□□□□ -1.11
VTI1A-207ENST00000489357 TMEM9Q9P0T7 183 aa8.09□□□□□ -1.11
VTI1A-207ENST00000489357 FZD4Q9ULV1 537 aa8.09□□□□□ -1.11
VTI1A-207ENST00000489357 PADI2Q9Y2J8 665 aa8.09□□□□□ -1.11
VTI1A-207ENST00000489357 AK5Q9Y6K8 562 aa8.09□□□□□ -1.11
VTI1A-207ENST00000489357 R4GN57 208 aa8.09□□□□□ -1.11
VTI1A-207ENST00000489357 CACNA1EQ15878 2313 aa8.09□□□□□ -1.11
VTI1A-207ENST00000489357 ANKDD1BA6NHY2 528 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 C10orf142B7Z368 130 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 K7ESM1 405 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 WIPF1O43516 503 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 NOBOXO60393 691 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 UGT2B11O75310 529 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 E2F6O75461 281 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 KLF8O95600 359 aaPredicted RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms