RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 CLCN2P51788 898 aa8.57□□□□□ -1.04
HDAC6-232ENST00000489053 CCNG1P51959 295 aa8.57□□□□□ -1.04
HDAC6-232ENST00000489053 CASP6P55212 293 aa8.57□□□□□ -1.04
HDAC6-232ENST00000489053 HSD17B7P56937 341 aa8.57□□□□□ -1.04
HDAC6-232ENST00000489053 RAB38P57729 211 aa8.57□□□□□ -1.04
HDAC6-232ENST00000489053 SLC26A5P58743 744 aa8.57□□□□□ -1.04
HDAC6-232ENST00000489053 MRPL49Q13405 166 aaKnown RBP8.57□□□□□ -1.04
HDAC6-232ENST00000489053 ZNF766Q5HY98 468 aa8.57□□□□□ -1.04
HDAC6-232ENST00000489053 TEX35Q5T0J7 233 aa8.57□□□□□ -1.04
HDAC6-232ENST00000489053 FCRLBQ6BAA4 426 aa8.57□□□□□ -1.04
HDAC6-232ENST00000489053 TTC19Q6DKK2 380 aaPredicted RBP8.57□□□□□ -1.04
HDAC6-232ENST00000489053 CLNKQ7Z7G1 428 aa8.57□□□□□ -1.04
HDAC6-232ENST00000489053 RPS19BP1Q86WX3 136 aaKnown RBP8.57□□□□□ -1.04
HDAC6-232ENST00000489053 RELL1Q8IUW5 271 aa8.57□□□□□ -1.04
HDAC6-232ENST00000489053 CNPY4Q8N129 248 aa8.57□□□□□ -1.04
HDAC6-232ENST00000489053 BEST3Q8N1M1 668 aa8.57□□□□□ -1.04
HDAC6-232ENST00000489053 TMEM178AQ8NBL3 297 aa8.57□□□□□ -1.04
HDAC6-232ENST00000489053 CATSPER1Q8NEC5 780 aa8.57□□□□□ -1.04
HDAC6-232ENST00000489053 C7orf57Q8NEG2 295 aa8.57□□□□□ -1.04
HDAC6-232ENST00000489053 GRHL3Q8TE85 626 aa8.57□□□□□ -1.04
HDAC6-232ENST00000489053 SSC4DQ8WTU2 575 aa8.57□□□□□ -1.04
HDAC6-232ENST00000489053 UBTD2Q8WUN7 234 aa8.57□□□□□ -1.04
HDAC6-232ENST00000489053 FAR1Q8WVX9 515 aa8.57□□□□□ -1.04
HDAC6-232ENST00000489053 SLC44A1Q8WWI5 657 aa8.57□□□□□ -1.04
HDAC6-232ENST00000489053 HAS2Q92819 552 aa8.57□□□□□ -1.04
HDAC6-232ENST00000489053 MS4A6EQ96DS6 147 aa8.57□□□□□ -1.04
HDAC6-232ENST00000489053 F2RL3Q96RI0 385 aa8.57□□□□□ -1.04
HDAC6-232ENST00000489053 RHOXF2Q9BQY4 288 aa8.57□□□□□ -1.04
HDAC6-232ENST00000489053 TBCDQ9BTW9 1192 aa8.57□□□□□ -1.04
HDAC6-232ENST00000489053 LANCL2Q9NS86 450 aa8.57□□□□□ -1.04
HDAC6-232ENST00000489053 FBXW2Q9UKT8 454 aa8.57□□□□□ -1.04
HDAC6-232ENST00000489053 PCDHGA11Q9Y5H2 935 aa8.57□□□□□ -1.04
HDAC6-232ENST00000489053 CSAG2Q9Y5P2 127 aa8.57□□□□□ -1.04
HDAC6-232ENST00000489053 CLCA3PQ9Y6N3 262 aa8.57□□□□□ -1.04
HDAC6-232ENST00000489053 CNTRLQ7Z7A1 2325 aa8.57□□□□□ -1.04
HDAC6-232ENST00000489053 FER1L5A0AVI2 2057 aa8.57□□□□□ -1.04
HDAC6-232ENST00000489053 SPTBN1Q01082 2364 aaKnown RBP8.56□□□□□ -1.04
HDAC6-232ENST00000489053 TNRC6AQ8NDV7 1962 aaKnown RBP8.56□□□□□ -1.04
HDAC6-232ENST00000489053 TRBV11-1A0A0K0K1C0 115 aa8.56□□□□□ -1.04
HDAC6-232ENST00000489053 IQANK1A0A1B0GTG1 560 aa8.56□□□□□ -1.04
HDAC6-232ENST00000489053 ARHGAP10A1A4S6 786 aa8.56□□□□□ -1.04
HDAC6-232ENST00000489053 BLACEA4D250 179 aa8.56□□□□□ -1.04
HDAC6-232ENST00000489053 SAGE2PA6NJ88 616 aa8.56□□□□□ -1.04
HDAC6-232ENST00000489053 GABRR3A8MPY1 467 aa8.56□□□□□ -1.04
HDAC6-232ENST00000489053 TRIM49D1C9J1S8 452 aa8.56□□□□□ -1.04
HDAC6-232ENST00000489053 FAM227AF5H4B4 570 aa8.56□□□□□ -1.04
HDAC6-232ENST00000489053 SAP18O00422 153 aaKnown RBP8.56□□□□□ -1.04
HDAC6-232ENST00000489053 CLDN9O95484 217 aa8.56□□□□□ -1.04
HDAC6-232ENST00000489053 C1QAP02745 245 aa8.56□□□□□ -1.04
HDAC6-232ENST00000489053 ALDOAP04075 364 aaKnown RBP8.56□□□□□ -1.04
HDAC6-232ENST00000489053 SNRPAP09012 282 aaKnown RBP8.56□□□□□ -1.04
HDAC6-232ENST00000489053 COL6A2P12110 1019 aa8.56□□□□□ -1.04
HDAC6-232ENST00000489053 EDN3P14138 238 aa8.56□□□□□ -1.04
HDAC6-232ENST00000489053 TAC1P20366 129 aa8.56□□□□□ -1.04
HDAC6-232ENST00000489053 CPN2P22792 545 aa8.56□□□□□ -1.04
HDAC6-232ENST00000489053 EEF1DP29692 281 aaKnown RBP8.56□□□□□ -1.04
HDAC6-232ENST00000489053 HNRNPH1P31943 449 aaKnown RBP8.56□□□□□ -1.04
HDAC6-232ENST00000489053 GMPRP36959 345 aa8.56□□□□□ -1.04
HDAC6-232ENST00000489053 BTG2P78543 158 aa8.56□□□□□ -1.04
HDAC6-232ENST00000489053 HYAL2Q12891 473 aa8.56□□□□□ -1.04
HDAC6-232ENST00000489053 DLG1Q12959 904 aa8.56□□□□□ -1.04
HDAC6-232ENST00000489053 IFT88Q13099 833 aa8.56□□□□□ -1.04
HDAC6-232ENST00000489053 GTF2H2Q13888 395 aa8.56□□□□□ -1.04
HDAC6-232ENST00000489053 NAA30Q147X3 362 aaPredicted RBP8.56□□□□□ -1.04
HDAC6-232ENST00000489053 SETDB1Q15047 1291 aa8.56□□□□□ -1.04
HDAC6-232ENST00000489053 OR1C1Q15619 314 aa8.56□□□□□ -1.04
HDAC6-232ENST00000489053 LIPJQ5W064 366 aa8.56□□□□□ -1.04
HDAC6-232ENST00000489053 GRHL2Q6ISB3 625 aa8.56□□□□□ -1.04
HDAC6-232ENST00000489053 RPUSD3Q6P087 351 aaKnown RBP8.56□□□□□ -1.04
HDAC6-232ENST00000489053 GTF2H2CQ6P1K8 395 aa8.56□□□□□ -1.04
HDAC6-232ENST00000489053 ABHD17CQ6PCB6 329 aa8.56□□□□□ -1.04
HDAC6-232ENST00000489053 CYP20A1Q6UW02 462 aa8.56□□□□□ -1.04
HDAC6-232ENST00000489053 TRMT10CQ7L0Y3 403 aaKnown RBP8.56□□□□□ -1.04
HDAC6-232ENST00000489053 CRLF3Q8IUI8 442 aa8.56□□□□□ -1.04
HDAC6-232ENST00000489053 CENPLQ8N0S6 344 aaPredicted RBP8.56□□□□□ -1.04
HDAC6-232ENST00000489053 TMEM132CQ8N3T6 1108 aa8.56□□□□□ -1.04
HDAC6-232ENST00000489053 TMEM156Q8N614 296 aa8.56□□□□□ -1.04
HDAC6-232ENST00000489053 PTGR2Q8N8N7 351 aaPredicted RBP8.56□□□□□ -1.04
HDAC6-232ENST00000489053 ST6GALNAC3Q8NDV1 305 aa8.56□□□□□ -1.04
HDAC6-232ENST00000489053 DNAJB8Q8NHS0 232 aa8.56□□□□□ -1.04
HDAC6-232ENST00000489053 PSMF1Q92530 271 aa8.56□□□□□ -1.04
HDAC6-232ENST00000489053 RGMAQ96B86 450 aa8.56□□□□□ -1.04
HDAC6-232ENST00000489053 MTBPQ96DY7 904 aa8.56□□□□□ -1.04
HDAC6-232ENST00000489053 PHF21BQ96EK2 531 aa8.56□□□□□ -1.04
HDAC6-232ENST00000489053 WDR34Q96EX3 536 aa8.56□□□□□ -1.04
HDAC6-232ENST00000489053 ATOH8Q96SQ7 321 aa8.56□□□□□ -1.04
HDAC6-232ENST00000489053 MRPL57Q9BQC6 102 aaKnown RBP8.56□□□□□ -1.04
HDAC6-232ENST00000489053 CDCP1Q9H5V8 836 aa8.56□□□□□ -1.04
HDAC6-232ENST00000489053 IPPKQ9H8X2 491 aa8.56□□□□□ -1.04
HDAC6-232ENST00000489053 WDR41Q9HAD4 459 aa8.56□□□□□ -1.04
HDAC6-232ENST00000489053 KLHL1Q9NR64 748 aa8.56□□□□□ -1.04
HDAC6-232ENST00000489053 MS4A12Q9NXJ0 267 aa8.56□□□□□ -1.04
HDAC6-232ENST00000489053 ANKRD10Q9NXR5 420 aa8.56□□□□□ -1.04
HDAC6-232ENST00000489053 COPS7AQ9UBW8 275 aa8.56□□□□□ -1.04
HDAC6-232ENST00000489053 PHF11Q9UIL8 331 aa8.56□□□□□ -1.04
HDAC6-232ENST00000489053 ZNF180Q9UJW8 692 aa8.56□□□□□ -1.04
HDAC6-232ENST00000489053 OSGIN2Q9Y236 505 aa8.56□□□□□ -1.04
HDAC6-232ENST00000489053 SLC5A6Q9Y289 635 aa8.56□□□□□ -1.04
HDAC6-232ENST00000489053 PCM1Q15154 2024 aa8.56□□□□□ -1.04
HDAC6-232ENST00000489053 HEATR5BQ9P2D3 2071 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms