RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 GPR78Q96P69 363 aa16.64■□□□□ 0.25
ITGB1-215ENST00000488494 F2RL3Q96RI0 385 aa16.64■□□□□ 0.25
ITGB1-215ENST00000488494 SERINC2Q96SA4 455 aa16.64■□□□□ 0.25
ITGB1-215ENST00000488494 CSF3RQ99062 836 aa16.64■□□□□ 0.25
ITGB1-215ENST00000488494 NPAS2Q99743 824 aa16.64■□□□□ 0.25
ITGB1-215ENST00000488494 NPLQ9BXD5 320 aaPredicted RBP16.64■□□□□ 0.25
ITGB1-215ENST00000488494 STMN3Q9NZ72 180 aa16.64■□□□□ 0.25
ITGB1-215ENST00000488494 CPSF2Q9P2I0 782 aaKnown RBP16.64■□□□□ 0.25
ITGB1-215ENST00000488494 MMACHCQ9Y4U1 282 aa16.64■□□□□ 0.25
ITGB1-215ENST00000488494 ANGPTL3Q9Y5C1 460 aa16.64■□□□□ 0.25
ITGB1-215ENST00000488494 LRRC14BA6NHZ5 514 aa16.63■□□□□ 0.25
ITGB1-215ENST00000488494 POC1B-GALNT4F8VUJ3 575 aa16.63■□□□□ 0.25
ITGB1-215ENST00000488494 MAN1A2O60476 641 aa16.63■□□□□ 0.25
ITGB1-215ENST00000488494 PRAMEF2O60811 474 aa16.63■□□□□ 0.25
ITGB1-215ENST00000488494 MAGEA12P43365 314 aa16.63■□□□□ 0.25
ITGB1-215ENST00000488494 SERPINB9P50453 376 aa16.63■□□□□ 0.25
ITGB1-215ENST00000488494 ST13P50502 369 aaKnown RBP16.63■□□□□ 0.25
ITGB1-215ENST00000488494 HNRNPFP52597 415 aaKnown RBP16.63■□□□□ 0.25
ITGB1-215ENST00000488494 ALDH18A1P54886 795 aaKnown RBP16.63■□□□□ 0.25
ITGB1-215ENST00000488494 MTTPP55157 894 aa16.63■□□□□ 0.25
ITGB1-215ENST00000488494 TAS2R50P59544 299 aa16.63■□□□□ 0.25
ITGB1-215ENST00000488494 TGM3Q08188 693 aa16.63■□□□□ 0.25
ITGB1-215ENST00000488494 TECRLQ5HYJ1 363 aa16.63■□□□□ 0.25
ITGB1-215ENST00000488494 RPUSD3Q6P087 351 aaKnown RBP16.63■□□□□ 0.25
ITGB1-215ENST00000488494 SCUBE1Q8IWY4 988 aa16.63■□□□□ 0.25
ITGB1-215ENST00000488494 LAS2Q8IYD9 372 aa16.63■□□□□ 0.25
ITGB1-215ENST00000488494 BCORP1Q8N888 145 aa16.63■□□□□ 0.25
ITGB1-215ENST00000488494 CEP112Q8N8E3 955 aa16.63■□□□□ 0.25
ITGB1-215ENST00000488494 ST6GALNAC3Q8NDV1 305 aa16.63■□□□□ 0.25
ITGB1-215ENST00000488494 TMEM52Q8NDY8 209 aa16.63■□□□□ 0.25
ITGB1-215ENST00000488494 SUN3Q8TAQ9 357 aa16.63■□□□□ 0.25
ITGB1-215ENST00000488494 ADAMTS18Q8TE60 1221 aa16.63■□□□□ 0.25
ITGB1-215ENST00000488494 FAR1Q8WVX9 515 aa16.63■□□□□ 0.25
ITGB1-215ENST00000488494 UBE2E3Q969T4 207 aa16.63■□□□□ 0.25
ITGB1-215ENST00000488494 ISL2Q96A47 359 aa16.63■□□□□ 0.25
ITGB1-215ENST00000488494 ZNF354BQ96LW1 612 aa16.63■□□□□ 0.25
ITGB1-215ENST00000488494 KCNC2Q96PR1 638 aa16.63■□□□□ 0.25
ITGB1-215ENST00000488494 MS4A8Q9BY19 250 aa16.63■□□□□ 0.25
ITGB1-215ENST00000488494 OLAHQ9NV23 265 aa16.63■□□□□ 0.25
ITGB1-215ENST00000488494 ANKRD10Q9NXR5 420 aa16.63■□□□□ 0.25
ITGB1-215ENST00000488494 ABI3Q9P2A4 366 aa16.63■□□□□ 0.25
ITGB1-215ENST00000488494 NFU1Q9UMS0 254 aa16.63■□□□□ 0.25
ITGB1-215ENST00000488494 SPTAN1Q13813 2472 aaKnown RBP16.63■□□□□ 0.25
ITGB1-215ENST00000488494 A0A087WUV0 522 aaPredicted RBP16.62■□□□□ 0.25
ITGB1-215ENST00000488494 A8MUA0 341 aa16.62■□□□□ 0.25
ITGB1-215ENST00000488494 TGFBR3LH3BV60 316 aa16.62■□□□□ 0.25
ITGB1-215ENST00000488494 SH3BGRLO75368 114 aa16.62■□□□□ 0.25
ITGB1-215ENST00000488494 RNF224P0DH78 156 aa16.62■□□□□ 0.25
ITGB1-215ENST00000488494 SERPINB1P30740 379 aa16.62■□□□□ 0.25
ITGB1-215ENST00000488494 LIM2P55344 173 aa16.62■□□□□ 0.25
ITGB1-215ENST00000488494 SLC13A2Q13183 592 aa16.62■□□□□ 0.25
ITGB1-215ENST00000488494 TUBA3CQ13748 450 aa16.62■□□□□ 0.25
ITGB1-215ENST00000488494 DDX39BQ13838 428 aaKnown RBP16.62■□□□□ 0.25
ITGB1-215ENST00000488494 MEP1AQ16819 746 aa16.62■□□□□ 0.25
ITGB1-215ENST00000488494 GRHL2Q6ISB3 625 aa16.62■□□□□ 0.25
ITGB1-215ENST00000488494 TUBA3EQ6PEY2 450 aa16.62■□□□□ 0.25
ITGB1-215ENST00000488494 ZNF793Q6ZN11 406 aa16.62■□□□□ 0.25
ITGB1-215ENST00000488494 CLNKQ7Z7G1 428 aa16.62■□□□□ 0.25
ITGB1-215ENST00000488494 PLD6Q8N2A8 252 aaKnown RBP16.62■□□□□ 0.25
ITGB1-215ENST00000488494 OR7G3Q8NG95 312 aa16.62■□□□□ 0.25
ITGB1-215ENST00000488494 ZNF473Q8WTR7 871 aaKnown RBP16.62■□□□□ 0.25
ITGB1-215ENST00000488494 DCAKDQ8WVC6 231 aa16.62■□□□□ 0.25
ITGB1-215ENST00000488494 TAAR6Q96RI8 345 aa16.62■□□□□ 0.25
ITGB1-215ENST00000488494 SLX1AQ9BQ83 275 aa16.62■□□□□ 0.25
ITGB1-215ENST00000488494 PRTFDC1Q9NRG1 225 aa16.62■□□□□ 0.25
ITGB1-215ENST00000488494 ZNF358Q9NW07 568 aa16.62■□□□□ 0.25
ITGB1-215ENST00000488494 MRPS33Q9Y291 106 aaKnown RBP16.62■□□□□ 0.25
ITGB1-215ENST00000488494 SCN2AQ99250 2005 aa16.62■□□□□ 0.25
ITGB1-215ENST00000488494 CNTRLQ7Z7A1 2325 aa16.61■□□□□ 0.25
ITGB1-215ENST00000488494 GABRR3A8MPY1 467 aa16.61■□□□□ 0.25
ITGB1-215ENST00000488494 SAP18O00422 153 aaKnown RBP16.61■□□□□ 0.25
ITGB1-215ENST00000488494 RTCAO00442 366 aaKnown RBP16.61■□□□□ 0.25
ITGB1-215ENST00000488494 KLK8O60259 260 aa16.61■□□□□ 0.25
ITGB1-215ENST00000488494 KRT38O76015 456 aa16.61■□□□□ 0.25
ITGB1-215ENST00000488494 MYO1DO94832 1006 aa16.61■□□□□ 0.25
ITGB1-215ENST00000488494 SIX3O95343 332 aaPredicted RBP16.61■□□□□ 0.25
ITGB1-215ENST00000488494 EDN3P14138 238 aa16.61■□□□□ 0.25
ITGB1-215ENST00000488494 PPP2R1BP30154 601 aa16.61■□□□□ 0.25
ITGB1-215ENST00000488494 PCDH1Q08174 1060 aa16.61■□□□□ 0.25
ITGB1-215ENST00000488494 GOLGA7Q7Z5G4 137 aa16.61■□□□□ 0.25
ITGB1-215ENST00000488494 UBE3DQ7Z6J8 389 aa16.61■□□□□ 0.25
ITGB1-215ENST00000488494 RNF175Q8N4F7 328 aa16.61■□□□□ 0.25
ITGB1-215ENST00000488494 PTGR2Q8N8N7 351 aaPredicted RBP16.61■□□□□ 0.25
ITGB1-215ENST00000488494 ELP5Q8TE02 316 aa16.61■□□□□ 0.25
ITGB1-215ENST00000488494 SSC4DQ8WTU2 575 aa16.61■□□□□ 0.25
ITGB1-215ENST00000488494 UTP23Q9BRU9 249 aaKnown RBP16.61■□□□□ 0.25
ITGB1-215ENST00000488494 ROGDIQ9GZN7 287 aa16.61■□□□□ 0.25
ITGB1-215ENST00000488494 ACTR8Q9H981 624 aa16.61■□□□□ 0.25
ITGB1-215ENST00000488494 PRDM7Q9NQW5 492 aa16.61■□□□□ 0.25
ITGB1-215ENST00000488494 XPR1Q9UBH6 696 aa16.61■□□□□ 0.25
ITGB1-215ENST00000488494 ZNF180Q9UJW8 692 aa16.61■□□□□ 0.25
ITGB1-215ENST00000488494 DAPP1Q9UN19 280 aa16.61■□□□□ 0.25
ITGB1-215ENST00000488494 EXOC1LA0A1B0GW35 172 aa16.6■□□□□ 0.25
ITGB1-215ENST00000488494 TRIM49D1C9J1S8 452 aa16.6■□□□□ 0.25
ITGB1-215ENST00000488494 CYR61O00622 381 aa16.6■□□□□ 0.25
ITGB1-215ENST00000488494 CLDN4O14493 209 aa16.6■□□□□ 0.25
ITGB1-215ENST00000488494 TGFB1P01137 390 aa16.6■□□□□ 0.25
ITGB1-215ENST00000488494 RHOXF2BP0C7M4 288 aa16.6■□□□□ 0.25
ITGB1-215ENST00000488494 CNTFP26441 200 aa16.6■□□□□ 0.25
ITGB1-215ENST00000488494 SSR2P43308 183 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms