RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 TGFB1P01137 390 aa24.98■■□□□ 1.59
HLA-C-208ENST00000487245 HSD17B2P37059 387 aa24.98■■□□□ 1.59
HLA-C-208ENST00000487245 C2orf80Q0P641 193 aa24.98■■□□□ 1.59
HLA-C-208ENST00000487245 TBCEQ15813 527 aaPredicted RBP24.98■■□□□ 1.59
HLA-C-208ENST00000487245 FAM46CQ5VWP2 391 aa24.98■■□□□ 1.59
HLA-C-208ENST00000487245 IKBIPQ70UQ0 350 aa24.98■■□□□ 1.59
HLA-C-208ENST00000487245 SPRED2Q7Z698 418 aa24.98■■□□□ 1.59
HLA-C-208ENST00000487245 C11orf96Q7Z7L8 435 aa24.98■■□□□ 1.59
HLA-C-208ENST00000487245 C12orf76Q8N812 135 aaPredicted RBP24.98■■□□□ 1.59
HLA-C-208ENST00000487245 RASSF1Q9NS23 344 aa24.98■■□□□ 1.59
HLA-C-208ENST00000487245 OSGIN1Q9UJX0 560 aa24.98■■□□□ 1.59
HLA-C-208ENST00000487245 ASF1AQ9Y294 204 aa24.98■■□□□ 1.59
HLA-C-208ENST00000487245 DNMT3AQ9Y6K1 912 aaPredicted RBP24.98■■□□□ 1.59
HLA-C-208ENST00000487245 KIAA1549LQ6ZVL6 1849 aa24.97■■□□□ 1.59
HLA-C-208ENST00000487245 RPN2P04844 631 aa24.97■■□□□ 1.59
HLA-C-208ENST00000487245 UGT2B10P36537 528 aa24.97■■□□□ 1.59
HLA-C-208ENST00000487245 VBP1P61758 197 aa24.97■■□□□ 1.59
HLA-C-208ENST00000487245 HBA1P69905 142 aa24.97■■□□□ 1.59
HLA-C-208ENST00000487245 EEF1A2Q05639 463 aaKnown RBP24.97■■□□□ 1.59
HLA-C-208ENST00000487245 CYP2A13Q16696 494 aa24.97■■□□□ 1.59
HLA-C-208ENST00000487245 TMC5Q6UXY8 1006 aa24.97■■□□□ 1.59
HLA-C-208ENST00000487245 AHSA2Q719I0 299 aa24.97■■□□□ 1.59
HLA-C-208ENST00000487245 ADCK1Q86TW2 530 aa24.97■■□□□ 1.59
HLA-C-208ENST00000487245 AMZ2Q86W34 360 aa24.97■■□□□ 1.59
HLA-C-208ENST00000487245 MMAAQ8IVH4 418 aaKnown RBP24.97■■□□□ 1.59
HLA-C-208ENST00000487245 DCUN1D3Q8IWE4 304 aa24.97■■□□□ 1.59
HLA-C-208ENST00000487245 MYDGFQ969H8 173 aa24.97■■□□□ 1.59
HLA-C-208ENST00000487245 UBE2FQ969M7 185 aa24.97■■□□□ 1.59
HLA-C-208ENST00000487245 ITPAQ9BY32 194 aa24.97■■□□□ 1.59
HLA-C-208ENST00000487245 OR51B5Q9H339 312 aa24.97■■□□□ 1.59
HLA-C-208ENST00000487245 AHSPQ9NZD4 102 aa24.97■■□□□ 1.59
HLA-C-208ENST00000487245 TCF20Q9UGU0 1960 aaKnown RBP24.97■■□□□ 1.59
HLA-C-208ENST00000487245 PDE4DIPQ5VU43 2346 aa24.97■■□□□ 1.59
HLA-C-208ENST00000487245 OTOL1A6NHN0 477 aaPredicted RBP24.96■■□□□ 1.59
HLA-C-208ENST00000487245 ITGA2P17301 1181 aa24.96■■□□□ 1.59
HLA-C-208ENST00000487245 CDH3P22223 829 aa24.96■■□□□ 1.59
HLA-C-208ENST00000487245 ARHGAP19Q14CB8 494 aa24.96■■□□□ 1.59
HLA-C-208ENST00000487245 TRIM16LQ309B1 348 aa24.96■■□□□ 1.59
HLA-C-208ENST00000487245 P3H2Q8IVL5 708 aa24.96■■□□□ 1.59
HLA-C-208ENST00000487245 OXR1Q8N573 874 aa24.96■■□□□ 1.59
HLA-C-208ENST00000487245 OR10G2Q8NGC3 310 aa24.96■■□□□ 1.59
HLA-C-208ENST00000487245 RHOXF1Q8NHV9 184 aa24.96■■□□□ 1.59
HLA-C-208ENST00000487245 WDR48Q8TAF3 677 aa24.96■■□□□ 1.59
HLA-C-208ENST00000487245 SPPL2AQ8TCT8 520 aa24.96■■□□□ 1.59
HLA-C-208ENST00000487245 LGALS12Q96DT0 336 aa24.96■■□□□ 1.59
HLA-C-208ENST00000487245 ITPKCQ96DU7 683 aa24.96■■□□□ 1.59
HLA-C-208ENST00000487245 FEVQ99581 238 aa24.96■■□□□ 1.59
HLA-C-208ENST00000487245 PCDHGA2Q9Y5H1 932 aa24.96■■□□□ 1.59
HLA-C-208ENST00000487245 TBC1D3BA6NDS4 549 aa24.96■■□□□ 1.59
HLA-C-208ENST00000487245 NTRK1P04629 796 aa24.96■■□□□ 1.59
HLA-C-208ENST00000487245 CD36P16671 472 aa24.96■■□□□ 1.59
HLA-C-208ENST00000487245 P2RY2P41231 377 aa24.96■■□□□ 1.59
HLA-C-208ENST00000487245 CRATP43155 626 aa24.96■■□□□ 1.59
HLA-C-208ENST00000487245 CRB2Q5IJ48 1285 aa24.96■■□□□ 1.59
HLA-C-208ENST00000487245 TMIGD1Q6UXZ0 262 aa24.96■■□□□ 1.59
HLA-C-208ENST00000487245 DACH2Q96NX9 599 aa24.96■■□□□ 1.59
HLA-C-208ENST00000487245 SLC35A5Q9BS91 424 aa24.96■■□□□ 1.59
HLA-C-208ENST00000487245 TRPV4Q9HBA0 871 aa24.96■■□□□ 1.59
HLA-C-208ENST00000487245 C1GALT1Q9NS00 363 aa24.96■■□□□ 1.59
HLA-C-208ENST00000487245 SPASTQ9UBP0 616 aa24.96■■□□□ 1.59
HLA-C-208ENST00000487245 WBP11Q9Y2W2 641 aaKnown RBP24.96■■□□□ 1.59
HLA-C-208ENST00000487245 BOLA2-SMG1P6H3BVE0 249 aa24.95■■□□□ 1.58
HLA-C-208ENST00000487245 ETFAP13804 333 aa24.95■■□□□ 1.58
HLA-C-208ENST00000487245 AQP1P29972 269 aa24.95■■□□□ 1.58
HLA-C-208ENST00000487245 TUBA1BP68363 451 aa24.95■■□□□ 1.58
HLA-C-208ENST00000487245 GPM6BQ13491 265 aa24.95■■□□□ 1.58
HLA-C-208ENST00000487245 SCARB2Q14108 478 aa24.95■■□□□ 1.58
HLA-C-208ENST00000487245 DGCR6Q14129 220 aa24.95■■□□□ 1.58
HLA-C-208ENST00000487245 MICAQ29983 383 aa24.95■■□□□ 1.58
HLA-C-208ENST00000487245 ZNF630Q2M218 657 aaPredicted RBP24.95■■□□□ 1.58
HLA-C-208ENST00000487245 COX20Q5RI15 118 aa24.95■■□□□ 1.58
HLA-C-208ENST00000487245 PNCKQ6P2M8 343 aa24.95■■□□□ 1.58
HLA-C-208ENST00000487245 FAM83HQ6ZRV2 1179 aaPredicted RBP24.95■■□□□ 1.58
HLA-C-208ENST00000487245 TUBA1AQ71U36 451 aa24.95■■□□□ 1.58
HLA-C-208ENST00000487245 BTLAQ7Z6A9 289 aa24.95■■□□□ 1.58
HLA-C-208ENST00000487245 DNAJC22Q8N4W6 341 aa24.95■■□□□ 1.58
HLA-C-208ENST00000487245 TAMM41Q96BW9 452 aa24.95■■□□□ 1.58
HLA-C-208ENST00000487245 KCNC2Q96PR1 638 aa24.95■■□□□ 1.58
HLA-C-208ENST00000487245 COPS4Q9BT78 406 aa24.95■■□□□ 1.58
HLA-C-208ENST00000487245 SLIRPQ9GZT3 109 aaKnown RBP24.95■■□□□ 1.58
HLA-C-208ENST00000487245 PELI2Q9HAT8 420 aa24.95■■□□□ 1.58
HLA-C-208ENST00000487245 THAP10Q9P2Z0 257 aaPredicted RBP24.95■■□□□ 1.58
HLA-C-208ENST00000487245 RAPGEFL1Q9UHV5 662 aa24.95■■□□□ 1.58
HLA-C-208ENST00000487245 TESMINQ9Y4I5 508 aa24.95■■□□□ 1.58
HLA-C-208ENST00000487245 LCKP06239 509 aa24.94■■□□□ 1.58
HLA-C-208ENST00000487245 BMP4P12644 408 aa24.94■■□□□ 1.58
HLA-C-208ENST00000487245 CXCR2P25025 360 aa24.94■■□□□ 1.58
HLA-C-208ENST00000487245 NCS1P62166 190 aa24.94■■□□□ 1.58
HLA-C-208ENST00000487245 GPR153Q6NV75 609 aa24.94■■□□□ 1.58
HLA-C-208ENST00000487245 TRIM40Q6P9F5 258 aa24.94■■□□□ 1.58
HLA-C-208ENST00000487245 ZNF852Q6ZMS4 543 aa24.94■■□□□ 1.58
HLA-C-208ENST00000487245 LRRTM4Q86VH4 590 aa24.94■■□□□ 1.58
HLA-C-208ENST00000487245 SLC30A8Q8IWU4 369 aa24.94■■□□□ 1.58
HLA-C-208ENST00000487245 DEPDC4Q8N2C3 294 aa24.94■■□□□ 1.58
HLA-C-208ENST00000487245 SLC5A8Q8N695 610 aa24.94■■□□□ 1.58
HLA-C-208ENST00000487245 DENND6BQ8NEG7 585 aa24.94■■□□□ 1.58
HLA-C-208ENST00000487245 OR4K1Q8NGD4 311 aa24.94■■□□□ 1.58
HLA-C-208ENST00000487245 NEURL2Q9BR09 285 aa24.94■■□□□ 1.58
HLA-C-208ENST00000487245 ALOXE3Q9BYJ1 711 aa24.94■■□□□ 1.58
HLA-C-208ENST00000487245 SFXN1Q9H9B4 322 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms