RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 CSF1P09603 554 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 STAG3L3P0CL85 134 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 MYBL1P10243 752 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 PRPS2P11908 318 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 KRT4P19013 534 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 CHRM3P20309 590 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 CA4P22748 312 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 IL32P24001 234 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 PSMA2P25787 234 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 ARL4AP40617 200 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 CASP3P42574 277 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 MMP13P45452 471 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 CAPZBP47756 277 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 PCP4P48539 62 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 GDI2P50395 445 aaKnown RBP6.51□□□□□ -1.37
HDAC3-209ENST00000486618 STC1P52823 247 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 CDH6P55285 790 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 GSDMDP57764 484 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 RAC3P60763 192 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 MAXP61244 160 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 TSPAN5P62079 268 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 RPL7AP62424 266 aaKnown RBP6.51□□□□□ -1.37
HDAC3-209ENST00000486618 NPRL3Q12980 569 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 IL10RAQ13651 578 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 CBFBQ13951 182 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 PTPRRQ15256 657 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 BCL2A1Q16548 175 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 CAMK4Q16566 473 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 CYP2A13Q16696 494 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 PGS1Q32NB8 556 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 DEPDC1Q5TB30 811 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 GRTP1Q5TC63 336 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 GARNL3Q5VVW2 1013 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 LYPLAL1Q5VWZ2 237 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 SP5Q6BEB4 398 aaPredicted RBP6.51□□□□□ -1.37
HDAC3-209ENST00000486618 ETFRF1Q6IPR1 90 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 CASC4Q6P4E1 433 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 ZCCHC12Q6PEW1 402 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 KLHL35Q6PF15 583 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 UNC5AQ6ZN44 842 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 FAM83HQ6ZRV2 1179 aaPredicted RBP6.51□□□□□ -1.37
HDAC3-209ENST00000486618 FAM92BQ6ZTR7 304 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 MON1BQ7L1V2 547 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 KMT5CQ86Y97 462 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 SLC43A2Q8N370 569 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 MPP5Q8N3R9 675 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 PGBD5Q8N414 524 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 CISD2Q8N5K1 135 aaKnown RBP6.51□□□□□ -1.37
HDAC3-209ENST00000486618 NPWQ8N729 165 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 GLIS1Q8NBF1 620 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 FDCSPQ8NFU4 85 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 OR52M1Q8NGK5 317 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 OR8K5Q8NH50 307 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 TSPEARQ8WU66 669 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 SLC9A6Q92581 669 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 SLC22A18Q96BI1 424 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 CXorf40BQ96DE9 158 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 SLC41A2Q96JW4 573 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 SECISBP2Q96T21 854 aaKnown RBP6.51□□□□□ -1.37
HDAC3-209ENST00000486618 PCDHB18PQ96TA0 734 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 PKP4Q99569 1192 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 SNRNP25Q9BV90 132 aaKnown RBP6.51□□□□□ -1.37
HDAC3-209ENST00000486618 NUDT9Q9BW91 350 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 CD244Q9BZW8 370 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 FAM83DQ9H4H8 585 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 PCDH18Q9HCL0 1135 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 AGPAT4Q9NRZ5 378 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 FGF21Q9NSA1 209 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 ASF1BQ9NVP2 202 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 PKD2L2Q9NZM6 624 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 ATP6V1HQ9UI12 483 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 SNX7Q9UNH6 387 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 RUVBL1Q9Y265 456 aaKnown RBP6.51□□□□□ -1.37
HDAC3-209ENST00000486618 B3GNT3Q9Y2A9 372 aa6.51□□□□□ -1.37
HDAC3-209ENST00000486618 PCYT1BQ9Y5K3 369 aaPredicted RBP6.51□□□□□ -1.37
HDAC3-209ENST00000486618 COPG1Q9Y678 874 aaKnown RBP6.51□□□□□ -1.37
HDAC3-209ENST00000486618 A0A0U1RQS6 177 aa6.5□□□□□ -1.37
HDAC3-209ENST00000486618 SERTM2A0A1B0GWG4 89 aa6.5□□□□□ -1.37
HDAC3-209ENST00000486618 TCRBV5S1A1TA0A578 114 aa6.5□□□□□ -1.37
HDAC3-209ENST00000486618 A6NL46 340 aa6.5□□□□□ -1.37
HDAC3-209ENST00000486618 KMOO15229 486 aa6.5□□□□□ -1.37
HDAC3-209ENST00000486618 TP73O15350 636 aa6.5□□□□□ -1.37
HDAC3-209ENST00000486618 DNAJA2O60884 412 aa6.5□□□□□ -1.37
HDAC3-209ENST00000486618 SCRG1O75711 98 aa6.5□□□□□ -1.37
HDAC3-209ENST00000486618 ATP5HO75947 161 aa6.5□□□□□ -1.37
HDAC3-209ENST00000486618 SEC24DO94855 1032 aaPredicted RBP6.5□□□□□ -1.37
HDAC3-209ENST00000486618 SLC25A14O95258 325 aaPredicted RBP6.5□□□□□ -1.37
HDAC3-209ENST00000486618 CLDN7O95471 211 aa6.5□□□□□ -1.37
HDAC3-209ENST00000486618 PEX11BO96011 259 aa6.5□□□□□ -1.37
HDAC3-209ENST00000486618 JCHAINP01591 159 aa6.5□□□□□ -1.37
HDAC3-209ENST00000486618 ALPPP05187 535 aa6.5□□□□□ -1.37
HDAC3-209ENST00000486618 INHBAP08476 426 aa6.5□□□□□ -1.37
HDAC3-209ENST00000486618 RAB40ALP0C0E4 278 aa6.5□□□□□ -1.37
HDAC3-209ENST00000486618 FOLR1P15328 257 aa6.5□□□□□ -1.37
HDAC3-209ENST00000486618 VCLP18206 1134 aa6.5□□□□□ -1.37
HDAC3-209ENST00000486618 IDSP22304 550 aa6.5□□□□□ -1.37
HDAC3-209ENST00000486618 ITGA3P26006 1051 aa6.5□□□□□ -1.37
HDAC3-209ENST00000486618 SERPINB6P35237 376 aa6.5□□□□□ -1.37
HDAC3-209ENST00000486618 TAGLN2P37802 199 aaKnown RBP6.5□□□□□ -1.37
HDAC3-209ENST00000486618 VAV2P52735 878 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms