RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 CCT7Q99832 543 aa10.78□□□□□ -0.68
NUP50-216ENST00000486184 MRPL1Q9BYD6 325 aaKnown RBP10.78□□□□□ -0.68
NUP50-216ENST00000486184 ACPTQ9BZG2 426 aa10.78□□□□□ -0.68
NUP50-216ENST00000486184 AICDAQ9GZX7 198 aa10.78□□□□□ -0.68
NUP50-216ENST00000486184 WDR54Q9H977 334 aa10.78□□□□□ -0.68
NUP50-216ENST00000486184 AKIRIN1Q9H9L7 192 aaPredicted RBP10.78□□□□□ -0.68
NUP50-216ENST00000486184 TNFRSF12AQ9NP84 129 aa10.78□□□□□ -0.68
NUP50-216ENST00000486184 RIC8BQ9NVN3 520 aa10.78□□□□□ -0.68
NUP50-216ENST00000486184 CTSFQ9UBX1 484 aa10.78□□□□□ -0.68
NUP50-216ENST00000486184 ZDHHC2Q9UIJ5 367 aa10.78□□□□□ -0.68
NUP50-216ENST00000486184 FARSAQ9Y285 508 aaKnown RBP10.78□□□□□ -0.68
NUP50-216ENST00000486184 MRPS33Q9Y291 106 aaKnown RBP10.78□□□□□ -0.68
NUP50-216ENST00000486184 PTRH2Q9Y3E5 179 aaKnown RBP10.78□□□□□ -0.68
NUP50-216ENST00000486184 DNAJC15Q9Y5T4 150 aa10.78□□□□□ -0.68
NUP50-216ENST00000486184 SERTM1A2A2V5 107 aa10.77□□□□□ -0.69
NUP50-216ENST00000486184 PIP5K1BO14986 540 aa10.77□□□□□ -0.69
NUP50-216ENST00000486184 CHST10O43529 356 aa10.77□□□□□ -0.69
NUP50-216ENST00000486184 SNNO75324 88 aaPredicted RBP10.77□□□□□ -0.69
NUP50-216ENST00000486184 RSL1D1O76021 490 aaKnown RBP10.77□□□□□ -0.69
NUP50-216ENST00000486184 TBX6O95947 436 aaPredicted RBP10.77□□□□□ -0.69
NUP50-216ENST00000486184 ONECUT2O95948 504 aa10.77□□□□□ -0.69
NUP50-216ENST00000486184 LINC00032P0C843 101 aa10.77□□□□□ -0.69
NUP50-216ENST00000486184 ATP5A1P25705 553 aaKnown RBP10.77□□□□□ -0.69
NUP50-216ENST00000486184 ARRB2P32121 409 aa10.77□□□□□ -0.69
NUP50-216ENST00000486184 UCNP55089 124 aa10.77□□□□□ -0.69
NUP50-216ENST00000486184 RAB38P57729 211 aa10.77□□□□□ -0.69
NUP50-216ENST00000486184 HMGCS1Q01581 520 aa10.77□□□□□ -0.69
NUP50-216ENST00000486184 MC1RQ01726 317 aa10.77□□□□□ -0.69
NUP50-216ENST00000486184 PDCD2Q16342 344 aaPredicted RBP10.77□□□□□ -0.69
NUP50-216ENST00000486184 NKG7Q16617 165 aa10.77□□□□□ -0.69
NUP50-216ENST00000486184 MINDY4Q4G0A6 757 aa10.77□□□□□ -0.69
NUP50-216ENST00000486184 CCNYL2Q5T2Q4 361 aa10.77□□□□□ -0.69
NUP50-216ENST00000486184 CES4AQ5XG92 561 aa10.77□□□□□ -0.69
NUP50-216ENST00000486184 FAM219BQ5XKK7 198 aa10.77□□□□□ -0.69
NUP50-216ENST00000486184 MRPL14Q6P1L8 145 aaKnown RBP10.77□□□□□ -0.69
NUP50-216ENST00000486184 CCDC81Q6ZN84 652 aa10.77□□□□□ -0.69
NUP50-216ENST00000486184 COX15Q7KZN9 410 aa10.77□□□□□ -0.69
NUP50-216ENST00000486184 TRIM46Q7Z4K8 759 aa10.77□□□□□ -0.69
NUP50-216ENST00000486184 SPACA3Q8IXA5 215 aa10.77□□□□□ -0.69
NUP50-216ENST00000486184 PRSS58Q8IYP2 241 aa10.77□□□□□ -0.69
NUP50-216ENST00000486184 CA13Q8N1Q1 262 aa10.77□□□□□ -0.69
NUP50-216ENST00000486184 METTL4Q8N3J2 472 aa10.77□□□□□ -0.69
NUP50-216ENST00000486184 C1orf52Q8N6N3 182 aaKnown RBP10.77□□□□□ -0.69
NUP50-216ENST00000486184 ACOT4Q8N9L9 421 aa10.77□□□□□ -0.69
NUP50-216ENST00000486184 OR5T3Q8NGG3 340 aa10.77□□□□□ -0.69
NUP50-216ENST00000486184 STT3BQ8TCJ2 826 aa10.77□□□□□ -0.69
NUP50-216ENST00000486184 CKAP2Q8WWK9 683 aa10.77□□□□□ -0.69
NUP50-216ENST00000486184 PEX11GQ96HA9 241 aa10.77□□□□□ -0.69
NUP50-216ENST00000486184 OR1F2PQ96R84 312 aa10.77□□□□□ -0.69
NUP50-216ENST00000486184 SORT1Q99523 831 aa10.77□□□□□ -0.69
NUP50-216ENST00000486184 SORBS1Q9BX66 1292 aaKnown RBP10.77□□□□□ -0.69
NUP50-216ENST00000486184 RBCK1Q9BYM8 510 aa10.77□□□□□ -0.69
NUP50-216ENST00000486184 SLC26A1Q9H2B4 701 aa10.77□□□□□ -0.69
NUP50-216ENST00000486184 ACTL8Q9H568 366 aa10.77□□□□□ -0.69
NUP50-216ENST00000486184 SOX17Q9H6I2 414 aaPredicted RBP10.77□□□□□ -0.69
NUP50-216ENST00000486184 ZNF395Q9H8N7 513 aaPredicted RBP10.77□□□□□ -0.69
NUP50-216ENST00000486184 WDR41Q9HAD4 459 aa10.77□□□□□ -0.69
NUP50-216ENST00000486184 PRDM7Q9NQW5 492 aa10.77□□□□□ -0.69
NUP50-216ENST00000486184 LYARQ9NX58 379 aaKnown RBP10.77□□□□□ -0.69
NUP50-216ENST00000486184 MS4A12Q9NXJ0 267 aa10.77□□□□□ -0.69
NUP50-216ENST00000486184 PHF11Q9UIL8 331 aa10.77□□□□□ -0.69
NUP50-216ENST00000486184 ADAM29Q9UKF5 820 aa10.77□□□□□ -0.69
NUP50-216ENST00000486184 FBXW2Q9UKT8 454 aa10.77□□□□□ -0.69
NUP50-216ENST00000486184 TCFL5Q9UL49 500 aa10.77□□□□□ -0.69
NUP50-216ENST00000486184 PCDHGA6Q9Y5G7 932 aa10.77□□□□□ -0.69
NUP50-216ENST00000486184 AHCTF1Q8WYP5 2266 aa10.77□□□□□ -0.69
NUP50-216ENST00000486184 GNG14A0A1W2PPG7 69 aa10.76□□□□□ -0.69
NUP50-216ENST00000486184 TRPC5OSA6NMA1 111 aa10.76□□□□□ -0.69
NUP50-216ENST00000486184 ZNF891A8MT65 544 aaPredicted RBP10.76□□□□□ -0.69
NUP50-216ENST00000486184 SLCO1B7G3V0H7 640 aa10.76□□□□□ -0.69
NUP50-216ENST00000486184 GUCY1B2O75343 617 aa10.76□□□□□ -0.69
NUP50-216ENST00000486184 SEC22BO75396 215 aa10.76□□□□□ -0.69
NUP50-216ENST00000486184 IGHEP01854 428 aa10.76□□□□□ -0.69
NUP50-216ENST00000486184 KLK1P06870 262 aa10.76□□□□□ -0.69
NUP50-216ENST00000486184 HEXBP07686 556 aa10.76□□□□□ -0.69
NUP50-216ENST00000486184 ZGLP1P0C6A0 271 aa10.76□□□□□ -0.69
NUP50-216ENST00000486184 KITP10721 976 aa10.76□□□□□ -0.69
NUP50-216ENST00000486184 CPN2P22792 545 aa10.76□□□□□ -0.69
NUP50-216ENST00000486184 TLX1P31314 330 aaPredicted RBP10.76□□□□□ -0.69
NUP50-216ENST00000486184 BSGP35613 385 aa10.76□□□□□ -0.69
NUP50-216ENST00000486184 BUD31P41223 144 aaPredicted RBP10.76□□□□□ -0.69
NUP50-216ENST00000486184 HK2P52789 917 aa10.76□□□□□ -0.69
NUP50-216ENST00000486184 MAPK12P53778 367 aa10.76□□□□□ -0.69
NUP50-216ENST00000486184 RPS18P62269 152 aaKnown RBP10.76□□□□□ -0.69
NUP50-216ENST00000486184 SNRPNP63162 240 aaKnown RBP10.76□□□□□ -0.69
NUP50-216ENST00000486184 OCRLQ01968 901 aa10.76□□□□□ -0.69
NUP50-216ENST00000486184 SLAMF1Q13291 335 aa10.76□□□□□ -0.69
NUP50-216ENST00000486184 GALNTL6Q49A17 601 aa10.76□□□□□ -0.69
NUP50-216ENST00000486184 VWA2Q5GFL6 755 aa10.76□□□□□ -0.69
NUP50-216ENST00000486184 ZNF793Q6ZN11 406 aa10.76□□□□□ -0.69
NUP50-216ENST00000486184 RNF165Q6ZSG1 346 aa10.76□□□□□ -0.69
NUP50-216ENST00000486184 SHISA6Q6ZSJ9 500 aa10.76□□□□□ -0.69
NUP50-216ENST00000486184 COMMD6Q7Z4G1 85 aa10.76□□□□□ -0.69
NUP50-216ENST00000486184 UBE3DQ7Z6J8 389 aa10.76□□□□□ -0.69
NUP50-216ENST00000486184 RAB43Q86YS6 212 aa10.76□□□□□ -0.69
NUP50-216ENST00000486184 ZCCHC7Q8N3Z6 543 aaKnown RBP10.76□□□□□ -0.69
NUP50-216ENST00000486184 KDF1Q8NAX2 398 aaPredicted RBP10.76□□□□□ -0.69
NUP50-216ENST00000486184 OR2Y1Q8NGV0 311 aa10.76□□□□□ -0.69
NUP50-216ENST00000486184 METTL21AQ8WXB1 218 aa10.76□□□□□ -0.69
NUP50-216ENST00000486184 STARD8Q92502 1023 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms