RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 MXRA7P84157 204 aa8.93□□□□□ -0.98
TMEM39A-208ENST00000486159 PLOD1Q02809 727 aaPredicted RBP8.93□□□□□ -0.98
TMEM39A-208ENST00000486159 SRSF11Q05519 484 aaKnown RBP8.93□□□□□ -0.98
TMEM39A-208ENST00000486159 STX5Q13190 355 aa8.93□□□□□ -0.98
TMEM39A-208ENST00000486159 CYLC2Q14093 348 aaPredicted RBP8.93□□□□□ -0.98
TMEM39A-208ENST00000486159 SSPNQ14714 243 aa8.93□□□□□ -0.98
TMEM39A-208ENST00000486159 PDCD2Q16342 344 aaPredicted RBP8.93□□□□□ -0.98
TMEM39A-208ENST00000486159 GSTA3Q16772 222 aa8.93□□□□□ -0.98
TMEM39A-208ENST00000486159 PPP1R3AQ16821 1122 aa8.93□□□□□ -0.98
TMEM39A-208ENST00000486159 UGT3A2Q3SY77 523 aa8.93□□□□□ -0.98
TMEM39A-208ENST00000486159 ACSBG2Q5FVE4 666 aa8.93□□□□□ -0.98
TMEM39A-208ENST00000486159 DCAF10Q5QP82 559 aa8.93□□□□□ -0.98
TMEM39A-208ENST00000486159 FBXW10Q5XX13 1052 aa8.93□□□□□ -0.98
TMEM39A-208ENST00000486159 ZNF787Q6DD87 383 aa8.93□□□□□ -0.98
TMEM39A-208ENST00000486159 NXNQ6DKJ4 435 aa8.93□□□□□ -0.98
TMEM39A-208ENST00000486159 OGFOD2Q6N063 350 aa8.93□□□□□ -0.98
TMEM39A-208ENST00000486159 C16orf89Q6UX73 402 aa8.93□□□□□ -0.98
TMEM39A-208ENST00000486159 CYHR1Q6ZMK1 362 aa8.93□□□□□ -0.98
TMEM39A-208ENST00000486159 RINLQ6ZS11 566 aa8.93□□□□□ -0.98
TMEM39A-208ENST00000486159 TTLL10Q6ZVT0 673 aa8.93□□□□□ -0.98
TMEM39A-208ENST00000486159 MED25Q71SY5 747 aa8.93□□□□□ -0.98
TMEM39A-208ENST00000486159 COX15Q7KZN9 410 aa8.93□□□□□ -0.98
TMEM39A-208ENST00000486159 MCATQ8IVS2 390 aaKnown RBP8.93□□□□□ -0.98
TMEM39A-208ENST00000486159 GPR135Q8IZ08 494 aa8.93□□□□□ -0.98
TMEM39A-208ENST00000486159 TMEM102Q8N9M5 508 aaPredicted RBP8.93□□□□□ -0.98
TMEM39A-208ENST00000486159 RBM15BQ8NDT2 890 aaKnown RBP8.93□□□□□ -0.98
TMEM39A-208ENST00000486159 AGR3Q8TD06 166 aa8.93□□□□□ -0.98
TMEM39A-208ENST00000486159 TSPEARQ8WU66 669 aa8.93□□□□□ -0.98
TMEM39A-208ENST00000486159 N4BP2L2Q92802 583 aaPredicted RBP8.93□□□□□ -0.98
TMEM39A-208ENST00000486159 UTP4Q969X6 686 aaKnown RBP8.93□□□□□ -0.98
TMEM39A-208ENST00000486159 FAM136AQ96C01 138 aa8.93□□□□□ -0.98
TMEM39A-208ENST00000486159 WDR55Q9H6Y2 383 aaPredicted RBP8.93□□□□□ -0.98
TMEM39A-208ENST00000486159 ZBTB26Q9HCK0 441 aa8.93□□□□□ -0.98
TMEM39A-208ENST00000486159 RIC8BQ9NVN3 520 aa8.93□□□□□ -0.98
TMEM39A-208ENST00000486159 IRAK4Q9NWZ3 460 aa8.93□□□□□ -0.98
TMEM39A-208ENST00000486159 IFT80Q9P2H3 777 aaPredicted RBP8.93□□□□□ -0.98
TMEM39A-208ENST00000486159 ERRFI1Q9UJM3 462 aaPredicted RBP8.93□□□□□ -0.98
TMEM39A-208ENST00000486159 ANKRD12Q6UB98 2062 aa8.93□□□□□ -0.98
TMEM39A-208ENST00000486159 ICE1Q9Y2F5 2266 aa8.93□□□□□ -0.98
TMEM39A-208ENST00000486159 POLQO75417 2590 aa8.93□□□□□ -0.98
TMEM39A-208ENST00000486159 FFAR3O14843 346 aa8.92□□□□□ -0.98
TMEM39A-208ENST00000486159 GPR42O15529 346 aa8.92□□□□□ -0.98
TMEM39A-208ENST00000486159 CIB2O75838 187 aa8.92□□□□□ -0.98
TMEM39A-208ENST00000486159 SLCO2B1O94956 709 aa8.92□□□□□ -0.98
TMEM39A-208ENST00000486159 WDR47O94967 919 aa8.92□□□□□ -0.98
TMEM39A-208ENST00000486159 SIX3O95343 332 aaPredicted RBP8.92□□□□□ -0.98
TMEM39A-208ENST00000486159 CLDN1O95832 211 aa8.92□□□□□ -0.98
TMEM39A-208ENST00000486159 ANXA5P08758 320 aa8.92□□□□□ -0.98
TMEM39A-208ENST00000486159 HIST1H2AGP0C0S8 130 aaPredicted RBP8.92□□□□□ -0.98
TMEM39A-208ENST00000486159 LBPP18428 481 aa8.92□□□□□ -0.98
TMEM39A-208ENST00000486159 HIST1H2ADP20671 130 aa8.92□□□□□ -0.98
TMEM39A-208ENST00000486159 HNRNPH1P31943 449 aaKnown RBP8.92□□□□□ -0.98
TMEM39A-208ENST00000486159 GGT5P36269 586 aa8.92□□□□□ -0.98
TMEM39A-208ENST00000486159 FOLR3P41439 243 aa8.92□□□□□ -0.98
TMEM39A-208ENST00000486159 BDKRB1P46663 353 aa8.92□□□□□ -0.98
TMEM39A-208ENST00000486159 CDH13P55290 713 aa8.92□□□□□ -0.98
TMEM39A-208ENST00000486159 STX1BP61266 288 aa8.92□□□□□ -0.98
TMEM39A-208ENST00000486159 SNRPNP63162 240 aaKnown RBP8.92□□□□□ -0.98
TMEM39A-208ENST00000486159 FASTKQ14296 549 aaKnown RBP8.92□□□□□ -0.98
TMEM39A-208ENST00000486159 SMU1Q2TAY7 513 aa8.92□□□□□ -0.98
TMEM39A-208ENST00000486159 TRMT5Q32P41 509 aaKnown RBP8.92□□□□□ -0.98
TMEM39A-208ENST00000486159 NKAIN1Q4KMZ8 207 aa8.92□□□□□ -0.98
TMEM39A-208ENST00000486159 SYTL3Q4VX76 610 aa8.92□□□□□ -0.98
TMEM39A-208ENST00000486159 CRB2Q5IJ48 1285 aa8.92□□□□□ -0.98
TMEM39A-208ENST00000486159 FRMPD2BQ6IN97 320 aa8.92□□□□□ -0.98
TMEM39A-208ENST00000486159 FIGLAQ6QHK4 219 aa8.92□□□□□ -0.98
TMEM39A-208ENST00000486159 LARP4Q71RC2 724 aaKnown RBP eCLIP8.92□□□□□ -0.98
TMEM39A-208ENST00000486159 NET1Q7Z628 596 aaPredicted RBP8.92□□□□□ -0.98
TMEM39A-208ENST00000486159 RAB43Q86YS6 212 aa8.92□□□□□ -0.98
TMEM39A-208ENST00000486159 SLC22A15Q8IZD6 547 aa8.92□□□□□ -0.98
TMEM39A-208ENST00000486159 GALNT16Q8N428 558 aa8.92□□□□□ -0.98
TMEM39A-208ENST00000486159 FAM13CQ8NE31 585 aa8.92□□□□□ -0.98
TMEM39A-208ENST00000486159 OR2Y1Q8NGV0 311 aa8.92□□□□□ -0.98
TMEM39A-208ENST00000486159 MCOLN3Q8TDD5 553 aa8.92□□□□□ -0.98
TMEM39A-208ENST00000486159 TRPC4APQ8TEL6 797 aa8.92□□□□□ -0.98
TMEM39A-208ENST00000486159 SSC4DQ8WTU2 575 aa8.92□□□□□ -0.98
TMEM39A-208ENST00000486159 TWIST2Q8WVJ9 160 aa8.92□□□□□ -0.98
TMEM39A-208ENST00000486159 ATL1Q8WXF7 558 aa8.92□□□□□ -0.98
TMEM39A-208ENST00000486159 ASB11Q8WXH4 323 aa8.92□□□□□ -0.98
TMEM39A-208ENST00000486159 PNPLA2Q96AD5 504 aa8.92□□□□□ -0.98
TMEM39A-208ENST00000486159 HIST1H2AHQ96KK5 128 aa8.92□□□□□ -0.98
TMEM39A-208ENST00000486159 SERPINI1Q99574 410 aa8.92□□□□□ -0.98
TMEM39A-208ENST00000486159 MIPEPQ99797 713 aa8.92□□□□□ -0.98
TMEM39A-208ENST00000486159 HIST1H2AJQ99878 128 aa8.92□□□□□ -0.98
TMEM39A-208ENST00000486159 H2AFJQ9BTM1 129 aa8.92□□□□□ -0.98
TMEM39A-208ENST00000486159 SHCBP1LQ9BZQ2 653 aa8.92□□□□□ -0.98
TMEM39A-208ENST00000486159 CD244Q9BZW8 370 aa8.92□□□□□ -0.98
TMEM39A-208ENST00000486159 SOX17Q9H6I2 414 aaPredicted RBP8.92□□□□□ -0.98
TMEM39A-208ENST00000486159 EFCAB1Q9HAE3 211 aa8.92□□□□□ -0.98
TMEM39A-208ENST00000486159 PARVBQ9HBI1 364 aa8.92□□□□□ -0.98
TMEM39A-208ENST00000486159 SLC6A20Q9NP91 592 aa8.92□□□□□ -0.98
TMEM39A-208ENST00000486159 PLSCR2Q9NRY7 297 aa8.92□□□□□ -0.98
TMEM39A-208ENST00000486159 UTP6Q9NYH9 597 aaKnown RBP8.92□□□□□ -0.98
TMEM39A-208ENST00000486159 OR6C2Q9NZP2 312 aa8.92□□□□□ -0.98
TMEM39A-208ENST00000486159 CTSFQ9UBX1 484 aa8.92□□□□□ -0.98
TMEM39A-208ENST00000486159 NDOR1Q9UHB4 597 aa8.92□□□□□ -0.98
TMEM39A-208ENST00000486159 GPN3Q9UHW5 284 aaPredicted RBP8.92□□□□□ -0.98
TMEM39A-208ENST00000486159 IKZF3Q9UKT9 509 aa8.92□□□□□ -0.98
TMEM39A-208ENST00000486159 PRPF19Q9UMS4 504 aaKnown RBP8.92□□□□□ -0.98
TMEM39A-208ENST00000486159 PLCL2Q9UPR0 1127 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms