RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 PNO1Q9NRX1 252 aaKnown RBP11.77□□□□□ -0.53
PTCD1-205ENST00000485746 DCDC2Q9UHG0 476 aa11.77□□□□□ -0.53
PTCD1-205ENST00000485746 TEKT2Q9UIF3 430 aa11.77□□□□□ -0.53
PTCD1-205ENST00000485746 B3GNT3Q9Y2A9 372 aa11.77□□□□□ -0.53
PTCD1-205ENST00000485746 RNF11Q9Y3C5 154 aa11.77□□□□□ -0.53
PTCD1-205ENST00000485746 SEC16AO15027 2179 aa11.77□□□□□ -0.53
PTCD1-205ENST00000485746 ANKRD12Q6UB98 2062 aa11.76□□□□□ -0.53
PTCD1-205ENST00000485746 HEATR5BQ9P2D3 2071 aa11.76□□□□□ -0.53
PTCD1-205ENST00000485746 A0A1W2PQ72 361 aa11.76□□□□□ -0.53
PTCD1-205ENST00000485746 TLDC2A0PJX2 215 aa11.76□□□□□ -0.53
PTCD1-205ENST00000485746 RTCAO00442 366 aaKnown RBP11.76□□□□□ -0.53
PTCD1-205ENST00000485746 E2F3O00716 465 aa11.76□□□□□ -0.53
PTCD1-205ENST00000485746 VPS4BO75351 444 aa11.76□□□□□ -0.53
PTCD1-205ENST00000485746 IFNA16P05015 189 aa11.76□□□□□ -0.53
PTCD1-205ENST00000485746 MAOAP21397 527 aa11.76□□□□□ -0.53
PTCD1-205ENST00000485746 PTX3P26022 381 aaPredicted RBP11.76□□□□□ -0.53
PTCD1-205ENST00000485746 EFNA3P52797 238 aa11.76□□□□□ -0.53
PTCD1-205ENST00000485746 TAS2R50P59544 299 aa11.76□□□□□ -0.53
PTCD1-205ENST00000485746 RPS13P62277 151 aaKnown RBP11.76□□□□□ -0.53
PTCD1-205ENST00000485746 PCDH1Q08174 1060 aa11.76□□□□□ -0.53
PTCD1-205ENST00000485746 IFFO1Q0D2I5 559 aa11.76□□□□□ -0.53
PTCD1-205ENST00000485746 IFT88Q13099 833 aa11.76□□□□□ -0.53
PTCD1-205ENST00000485746 ZRSR2Q15696 482 aaKnown RBP11.76□□□□□ -0.53
PTCD1-205ENST00000485746 ADPRMQ3LIE5 342 aa11.76□□□□□ -0.53
PTCD1-205ENST00000485746 PLEKHN1Q494U1 663 aaPredicted RBP11.76□□□□□ -0.53
PTCD1-205ENST00000485746 KHDRBS2Q5VWX1 349 aaKnown RBP11.76□□□□□ -0.53
PTCD1-205ENST00000485746 PLAG1Q6DJT9 500 aa11.76□□□□□ -0.53
PTCD1-205ENST00000485746 OR4C11Q6IEV9 310 aa11.76□□□□□ -0.53
PTCD1-205ENST00000485746 IGFL3Q6UXB1 125 aa11.76□□□□□ -0.53
PTCD1-205ENST00000485746 IQCKQ8N0W5 287 aa11.76□□□□□ -0.53
PTCD1-205ENST00000485746 RNF175Q8N4F7 328 aa11.76□□□□□ -0.53
PTCD1-205ENST00000485746 SUN3Q8TAQ9 357 aa11.76□□□□□ -0.53
PTCD1-205ENST00000485746 M1APQ8TC57 530 aa11.76□□□□□ -0.53
PTCD1-205ENST00000485746 IMMP1LQ96LU5 166 aa11.76□□□□□ -0.53
PTCD1-205ENST00000485746 QRFPRQ96P65 431 aa11.76□□□□□ -0.53
PTCD1-205ENST00000485746 CDK15Q96Q40 435 aa11.76□□□□□ -0.53
PTCD1-205ENST00000485746 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.76□□□□□ -0.53
PTCD1-205ENST00000485746 EPB41L4BQ9H329 900 aa11.76□□□□□ -0.53
PTCD1-205ENST00000485746 DMRT3Q9NQL9 472 aa11.76□□□□□ -0.53
PTCD1-205ENST00000485746 STMN3Q9NZ72 180 aa11.76□□□□□ -0.53
PTCD1-205ENST00000485746 TMEM216Q9P0N5 145 aa11.76□□□□□ -0.53
PTCD1-205ENST00000485746 ABI3Q9P2A4 366 aa11.76□□□□□ -0.53
PTCD1-205ENST00000485746 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.76□□□□□ -0.53
PTCD1-205ENST00000485746 PCTPQ9UKL6 214 aa11.76□□□□□ -0.53
PTCD1-205ENST00000485746 FBXW2Q9UKT8 454 aa11.76□□□□□ -0.53
PTCD1-205ENST00000485746 VPS4AQ9UN37 437 aa11.76□□□□□ -0.53
PTCD1-205ENST00000485746 PLAAQ9Y263 795 aa11.76□□□□□ -0.53
PTCD1-205ENST00000485746 MMACHCQ9Y4U1 282 aa11.76□□□□□ -0.53
PTCD1-205ENST00000485746 V9GYY5 206 aaPredicted RBP11.76□□□□□ -0.53
PTCD1-205ENST00000485746 PCSK5Q92824 1860 aa11.75□□□□□ -0.53
PTCD1-205ENST00000485746 A8MT66 165 aa11.75□□□□□ -0.53
PTCD1-205ENST00000485746 H0YIV9 168 aa11.75□□□□□ -0.53
PTCD1-205ENST00000485746 OR7A17O14581 309 aa11.75□□□□□ -0.53
PTCD1-205ENST00000485746 SUPT7LO94864 414 aa11.75□□□□□ -0.53
PTCD1-205ENST00000485746 OTCP00480 354 aa11.75□□□□□ -0.53
PTCD1-205ENST00000485746 GSTA1P08263 222 aa11.75□□□□□ -0.53
PTCD1-205ENST00000485746 CPN2P22792 545 aa11.75□□□□□ -0.53
PTCD1-205ENST00000485746 ATP5A1P25705 553 aaKnown RBP11.75□□□□□ -0.53
PTCD1-205ENST00000485746 HSD17B3P37058 310 aa11.75□□□□□ -0.53
PTCD1-205ENST00000485746 CD97P48960 835 aa11.75□□□□□ -0.53
PTCD1-205ENST00000485746 NEK2P51955 445 aa11.75□□□□□ -0.53
PTCD1-205ENST00000485746 LIM2P55344 173 aa11.75□□□□□ -0.53
PTCD1-205ENST00000485746 VSNL1P62760 191 aa11.75□□□□□ -0.53
PTCD1-205ENST00000485746 ZNF33BQ06732 778 aa11.75□□□□□ -0.53
PTCD1-205ENST00000485746 SLAMF1Q13291 335 aa11.75□□□□□ -0.53
PTCD1-205ENST00000485746 E2F2Q14209 437 aa11.75□□□□□ -0.53
PTCD1-205ENST00000485746 INPP5JQ15735 1006 aaPredicted RBP11.75□□□□□ -0.53
PTCD1-205ENST00000485746 SGO1Q5FBB7 561 aa11.75□□□□□ -0.53
PTCD1-205ENST00000485746 DEPDC1Q5TB30 811 aa11.75□□□□□ -0.53
PTCD1-205ENST00000485746 B3GNTL1Q67FW5 361 aaPredicted RBP11.75□□□□□ -0.53
PTCD1-205ENST00000485746 RPS27LQ71UM5 84 aaKnown RBP11.75□□□□□ -0.53
PTCD1-205ENST00000485746 CLNKQ7Z7G1 428 aa11.75□□□□□ -0.53
PTCD1-205ENST00000485746 SLC22A9Q8IVM8 553 aa11.75□□□□□ -0.53
PTCD1-205ENST00000485746 ZNF595Q8IYB9 648 aa11.75□□□□□ -0.53
PTCD1-205ENST00000485746 CISD2Q8N5K1 135 aaKnown RBP11.75□□□□□ -0.53
PTCD1-205ENST00000485746 ACOT4Q8N9L9 421 aa11.75□□□□□ -0.53
PTCD1-205ENST00000485746 L3MBTL4Q8NA19 623 aa11.75□□□□□ -0.53
PTCD1-205ENST00000485746 CCDC63Q8NA47 563 aa11.75□□□□□ -0.53
PTCD1-205ENST00000485746 OR1N1Q8NGS0 311 aa11.75□□□□□ -0.53
PTCD1-205ENST00000485746 ZNF354BQ96LW1 612 aa11.75□□□□□ -0.53
PTCD1-205ENST00000485746 NSUN5Q96P11 429 aaKnown RBP11.75□□□□□ -0.53
PTCD1-205ENST00000485746 CLMPQ9H6B4 373 aa11.75□□□□□ -0.53
PTCD1-205ENST00000485746 NECTIN3Q9NQS3 549 aa11.75□□□□□ -0.53
PTCD1-205ENST00000485746 PRDM7Q9NQW5 492 aa11.75□□□□□ -0.53
PTCD1-205ENST00000485746 PLA2G3Q9NZ20 509 aa11.75□□□□□ -0.53
PTCD1-205ENST00000485746 DAPP1Q9UN19 280 aa11.75□□□□□ -0.53
PTCD1-205ENST00000485746 FER1L5A0AVI2 2057 aa11.75□□□□□ -0.53
PTCD1-205ENST00000485746 PIEZO2Q9H5I5 2752 aa11.74□□□□□ -0.53
PTCD1-205ENST00000485746 MDC1Q14676 2089 aaKnown RBP11.74□□□□□ -0.53
PTCD1-205ENST00000485746 A0A1W2PPM1 405 aa11.74□□□□□ -0.53
PTCD1-205ENST00000485746 GLRA3O75311 464 aa11.74□□□□□ -0.53
PTCD1-205ENST00000485746 SORBS2O94875 1100 aaKnown RBP11.74□□□□□ -0.53
PTCD1-205ENST00000485746 TBX6O95947 436 aaPredicted RBP11.74□□□□□ -0.53
PTCD1-205ENST00000485746 F10P00742 488 aa11.74□□□□□ -0.53
PTCD1-205ENST00000485746 TSPAN8P19075 237 aa11.74□□□□□ -0.53
PTCD1-205ENST00000485746 TNNI3P19429 210 aa11.74□□□□□ -0.53
PTCD1-205ENST00000485746 HIST1H1TP22492 207 aaPredicted RBP11.74□□□□□ -0.53
PTCD1-205ENST00000485746 ATP5F1P24539 256 aaPredicted RBP11.74□□□□□ -0.53
PTCD1-205ENST00000485746 TLX1P31314 330 aaPredicted RBP11.74□□□□□ -0.53
PTCD1-205ENST00000485746 CCT5P48643 541 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms