RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 ABHD17CQ6PCB6 329 aa15.9■□□□□ 0.14
CTSA-207ENST00000484855 PTOV1Q86YD1 416 aa15.9■□□□□ 0.14
CTSA-207ENST00000484855 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.9■□□□□ 0.14
CTSA-207ENST00000484855 NATD1Q8N6N6 113 aa15.9■□□□□ 0.14
CTSA-207ENST00000484855 FAM86B1Q8N7N1 296 aa15.9■□□□□ 0.14
CTSA-207ENST00000484855 FAM46DQ8NEK8 389 aa15.9■□□□□ 0.14
CTSA-207ENST00000484855 OR2L5Q8NG80 312 aa15.9■□□□□ 0.14
CTSA-207ENST00000484855 SLC47A1Q96FL8 570 aa15.9■□□□□ 0.14
CTSA-207ENST00000484855 DPH2Q9BQC3 489 aaPredicted RBP15.9■□□□□ 0.14
CTSA-207ENST00000484855 ABCG4Q9H172 646 aa15.9■□□□□ 0.14
CTSA-207ENST00000484855 C2orf74A8MZ97 194 aa15.9■□□□□ 0.14
CTSA-207ENST00000484855 B4DGG1 531 aa15.9■□□□□ 0.14
CTSA-207ENST00000484855 PDPK1O15530 556 aa15.9■□□□□ 0.14
CTSA-207ENST00000484855 LDLRP01130 860 aa15.9■□□□□ 0.14
CTSA-207ENST00000484855 CKMT2P17540 419 aa15.9■□□□□ 0.14
CTSA-207ENST00000484855 SOAT1P35610 550 aa15.9■□□□□ 0.14
CTSA-207ENST00000484855 HSPA13P48723 471 aa15.9■□□□□ 0.14
CTSA-207ENST00000484855 CCT8P50990 548 aa15.9■□□□□ 0.14
CTSA-207ENST00000484855 ARFIP1P53367 373 aa15.9■□□□□ 0.14
CTSA-207ENST00000484855 STXBP1P61764 594 aaKnown RBP15.9■□□□□ 0.14
CTSA-207ENST00000484855 HHEXQ03014 270 aa15.9■□□□□ 0.14
CTSA-207ENST00000484855 FOLH1Q04609 750 aa15.9■□□□□ 0.14
CTSA-207ENST00000484855 RGNQ15493 299 aa15.9■□□□□ 0.14
CTSA-207ENST00000484855 NRF1Q16656 503 aa15.9■□□□□ 0.14
CTSA-207ENST00000484855 FAM180BQ6P0A1 224 aa15.9■□□□□ 0.14
CTSA-207ENST00000484855 ZBTB49Q6ZSB9 765 aa15.9■□□□□ 0.14
CTSA-207ENST00000484855 IQCHQ86VS3 1027 aa15.9■□□□□ 0.14
CTSA-207ENST00000484855 UBALD2Q8IYN6 164 aa15.9■□□□□ 0.14
CTSA-207ENST00000484855 ABCA7Q8IZY2 2146 aa15.9■□□□□ 0.14
CTSA-207ENST00000484855 SRFBP1Q8NEF9 429 aaKnown RBP15.9■□□□□ 0.14
CTSA-207ENST00000484855 HSPA12BQ96MM6 686 aa15.9■□□□□ 0.14
CTSA-207ENST00000484855 YY1AP1Q9H869 796 aa15.9■□□□□ 0.14
CTSA-207ENST00000484855 OLAHQ9NV23 265 aa15.9■□□□□ 0.14
CTSA-207ENST00000484855 ENTPD2Q9Y5L3 495 aa15.9■□□□□ 0.14
CTSA-207ENST00000484855 TNFSF14O43557 240 aa15.89■□□□□ 0.13
CTSA-207ENST00000484855 PRKD3O94806 890 aa15.89■□□□□ 0.13
CTSA-207ENST00000484855 CSF2P04141 144 aa15.89■□□□□ 0.13
CTSA-207ENST00000484855 FAM58BPP0C7Q3 252 aa15.89■□□□□ 0.13
CTSA-207ENST00000484855 HIST1H1TP22492 207 aaPredicted RBP15.89■□□□□ 0.13
CTSA-207ENST00000484855 RPS9P46781 194 aaKnown RBP15.89■□□□□ 0.13
CTSA-207ENST00000484855 MED21Q13503 144 aa15.89■□□□□ 0.13
CTSA-207ENST00000484855 SLC9A5Q14940 896 aa15.89■□□□□ 0.13
CTSA-207ENST00000484855 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.89■□□□□ 0.13
CTSA-207ENST00000484855 SPESP1Q6UW49 350 aa15.89■□□□□ 0.13
CTSA-207ENST00000484855 OR8K5Q8NH50 307 aa15.89■□□□□ 0.13
CTSA-207ENST00000484855 POP5Q969H6 163 aaKnown RBP15.89■□□□□ 0.13
CTSA-207ENST00000484855 FCRL4Q96PJ5 515 aa15.89■□□□□ 0.13
CTSA-207ENST00000484855 CHST8Q9H2A9 424 aa15.89■□□□□ 0.13
CTSA-207ENST00000484855 Q9H521 79 aa15.89■□□□□ 0.13
CTSA-207ENST00000484855 C5AR2Q9P296 337 aa15.89■□□□□ 0.13
CTSA-207ENST00000484855 ANKMY1Q9P2S6 941 aa15.89■□□□□ 0.13
CTSA-207ENST00000484855 ACSL6Q9UKU0 697 aa15.89■□□□□ 0.13
CTSA-207ENST00000484855 RAB26Q9ULW5 256 aa15.89■□□□□ 0.13
CTSA-207ENST00000484855 DCNP07585 359 aaKnown RBP15.89■□□□□ 0.13
CTSA-207ENST00000484855 NME1P15531 152 aaKnown RBP15.89■□□□□ 0.13
CTSA-207ENST00000484855 CHI3L1P36222 383 aaPredicted RBP15.89■□□□□ 0.13
CTSA-207ENST00000484855 RGS1Q08116 209 aa15.89■□□□□ 0.13
CTSA-207ENST00000484855 ADRM1Q16186 407 aa15.89■□□□□ 0.13
CTSA-207ENST00000484855 LRRC23Q53EV4 343 aaPredicted RBP15.89■□□□□ 0.13
CTSA-207ENST00000484855 NDUFAF5Q5TEU4 345 aa15.89■□□□□ 0.13
CTSA-207ENST00000484855 FCRL6Q6DN72 434 aa15.89■□□□□ 0.13
CTSA-207ENST00000484855 FIGLAQ6QHK4 219 aa15.89■□□□□ 0.13
CTSA-207ENST00000484855 TMEM26Q6ZUK4 368 aa15.89■□□□□ 0.13
CTSA-207ENST00000484855 VN1R4Q7Z5H5 301 aa15.89■□□□□ 0.13
CTSA-207ENST00000484855 ASPGQ86U10 573 aa15.89■□□□□ 0.13
CTSA-207ENST00000484855 ZNF761Q86XN6 746 aaPredicted RBP15.89■□□□□ 0.13
CTSA-207ENST00000484855 EPHX4Q8IUS5 362 aa15.89■□□□□ 0.13
CTSA-207ENST00000484855 RBM12BQ8IXT5 1001 aaKnown RBP15.89■□□□□ 0.13
CTSA-207ENST00000484855 OR5AK3PQ8NH89 298 aa15.89■□□□□ 0.13
CTSA-207ENST00000484855 EXOSC8Q96B26 276 aaKnown RBP15.89■□□□□ 0.13
CTSA-207ENST00000484855 ZNF764Q96H86 408 aaPredicted RBP15.89■□□□□ 0.13
CTSA-207ENST00000484855 SLC29A1Q99808 456 aa15.89■□□□□ 0.13
CTSA-207ENST00000484855 C9orf16Q9BUW7 83 aa15.89■□□□□ 0.13
CTSA-207ENST00000484855 FAIM2Q9BWQ8 316 aa15.89■□□□□ 0.13
CTSA-207ENST00000484855 PRDM7Q9NQW5 492 aa15.89■□□□□ 0.13
CTSA-207ENST00000484855 KNL1Q8NG31 2342 aa15.88■□□□□ 0.13
CTSA-207ENST00000484855 SCN3AQ9NY46 2000 aa15.88■□□□□ 0.13
CTSA-207ENST00000484855 H0YJX3 145 aa15.88■□□□□ 0.13
CTSA-207ENST00000484855 TLR4O00206 839 aa15.88■□□□□ 0.13
CTSA-207ENST00000484855 SOCS2O14508 198 aa15.88■□□□□ 0.13
CTSA-207ENST00000484855 ATP5A1P25705 553 aaKnown RBP15.88■□□□□ 0.13
CTSA-207ENST00000484855 CRATP43155 626 aa15.88■□□□□ 0.13
CTSA-207ENST00000484855 RAB8AP61006 207 aa15.88■□□□□ 0.13
CTSA-207ENST00000484855 TGM3Q08188 693 aa15.88■□□□□ 0.13
CTSA-207ENST00000484855 SLAMF1Q13291 335 aa15.88■□□□□ 0.13
CTSA-207ENST00000484855 ELOCQ15369 112 aa15.88■□□□□ 0.13
CTSA-207ENST00000484855 NKG7Q16617 165 aa15.88■□□□□ 0.13
CTSA-207ENST00000484855 SLC5A12Q1EHB4 618 aa15.88■□□□□ 0.13
CTSA-207ENST00000484855 INTS11Q5TA45 600 aaKnown RBP15.88■□□□□ 0.13
CTSA-207ENST00000484855 ACOT4Q8N9L9 421 aa15.88■□□□□ 0.13
CTSA-207ENST00000484855 OR52N2Q8NGI0 321 aa15.88■□□□□ 0.13
CTSA-207ENST00000484855 NT5CQ8TCD5 201 aa15.88■□□□□ 0.13
CTSA-207ENST00000484855 VPS50Q96JG6 964 aa15.88■□□□□ 0.13
CTSA-207ENST00000484855 BDH2Q9BUT1 245 aa15.88■□□□□ 0.13
CTSA-207ENST00000484855 TM9SF3Q9HD45 589 aa15.88■□□□□ 0.13
CTSA-207ENST00000484855 SLAMF7Q9NQ25 335 aa15.88■□□□□ 0.13
CTSA-207ENST00000484855 HRASLS2Q9NWW9 162 aa15.88■□□□□ 0.13
CTSA-207ENST00000484855 OAZ3Q9UMX2 235 aa15.88■□□□□ 0.13
CTSA-207ENST00000484855 AP4B1Q9Y6B7 739 aa15.88■□□□□ 0.13
CTSA-207ENST00000484855 C19orf67A6NJJ6 358 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms