RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 ACADLP28330 430 aa6.62□□□□□ -1.35
BRCA1-216ENST00000484087 GCKP35557 465 aa6.62□□□□□ -1.35
BRCA1-216ENST00000484087 GPR3P46089 330 aa6.62□□□□□ -1.35
BRCA1-216ENST00000484087 CAPZBP47756 277 aa6.62□□□□□ -1.35
BRCA1-216ENST00000484087 PTDSS1P48651 473 aaKnown RBP6.62□□□□□ -1.35
BRCA1-216ENST00000484087 SLC7A2P52569 658 aa6.62□□□□□ -1.35
BRCA1-216ENST00000484087 TBPL1P62380 186 aa6.62□□□□□ -1.35
BRCA1-216ENST00000484087 GPLD1P80108 840 aa6.62□□□□□ -1.35
BRCA1-216ENST00000484087 PCDH1Q08174 1060 aa6.62□□□□□ -1.35
BRCA1-216ENST00000484087 BNIP2Q12982 314 aa6.62□□□□□ -1.35
BRCA1-216ENST00000484087 CEACAM7Q14002 265 aa6.62□□□□□ -1.35
BRCA1-216ENST00000484087 DOC2AQ14183 400 aa6.62□□□□□ -1.35
BRCA1-216ENST00000484087 MAP7Q14244 749 aa6.62□□□□□ -1.35
BRCA1-216ENST00000484087 TRIM25Q14258 630 aaKnown RBP6.62□□□□□ -1.35
BRCA1-216ENST00000484087 KRT33BQ14525 404 aa6.62□□□□□ -1.35
BRCA1-216ENST00000484087 ARHGAP19Q14CB8 494 aa6.62□□□□□ -1.35
BRCA1-216ENST00000484087 TIGD2Q4W5G0 525 aa6.62□□□□□ -1.35
BRCA1-216ENST00000484087 METRNLQ641Q3 311 aa6.62□□□□□ -1.35
BRCA1-216ENST00000484087 MED27Q6P2C8 311 aa6.62□□□□□ -1.35
BRCA1-216ENST00000484087 LRRC74BQ6ZQY2 392 aa6.62□□□□□ -1.35
BRCA1-216ENST00000484087 TMPRSS11BQ86T26 416 aa6.62□□□□□ -1.35
BRCA1-216ENST00000484087 TRIM73Q86UV7 250 aa6.62□□□□□ -1.35
BRCA1-216ENST00000484087 SPATA24Q86W54 205 aa6.62□□□□□ -1.35
BRCA1-216ENST00000484087 BPHLQ86WA6 291 aaPredicted RBP6.62□□□□□ -1.35
BRCA1-216ENST00000484087 FAM20CQ8IXL6 584 aa6.62□□□□□ -1.35
BRCA1-216ENST00000484087 KRT78Q8N1N4 520 aa6.62□□□□□ -1.35
BRCA1-216ENST00000484087 LIX1Q8N485 282 aa6.62□□□□□ -1.35
BRCA1-216ENST00000484087 BMPERQ8N8U9 685 aa6.62□□□□□ -1.35
BRCA1-216ENST00000484087 ZNF248Q8NDW4 579 aa6.62□□□□□ -1.35
BRCA1-216ENST00000484087 OR5AR1Q8NGP9 310 aa6.62□□□□□ -1.35
BRCA1-216ENST00000484087 DNAJB8Q8NHS0 232 aa6.62□□□□□ -1.35
BRCA1-216ENST00000484087 PROKR1Q8TCW9 393 aa6.62□□□□□ -1.35
BRCA1-216ENST00000484087 LRRC58Q96CX6 371 aa6.62□□□□□ -1.35
BRCA1-216ENST00000484087 ZNF578Q96N58 590 aaPredicted RBP6.62□□□□□ -1.35
BRCA1-216ENST00000484087 MAP3K3Q99759 626 aa6.62□□□□□ -1.35
BRCA1-216ENST00000484087 CMKLR1Q99788 373 aa6.62□□□□□ -1.35
BRCA1-216ENST00000484087 SH3GL1Q99961 368 aa6.62□□□□□ -1.35
BRCA1-216ENST00000484087 TACO1Q9BSH4 297 aaKnown RBP6.62□□□□□ -1.35
BRCA1-216ENST00000484087 HAUS8Q9BT25 410 aa6.62□□□□□ -1.35
BRCA1-216ENST00000484087 EFHD1Q9BUP0 239 aa6.62□□□□□ -1.35
BRCA1-216ENST00000484087 RAB11FIP5Q9BXF6 653 aa6.62□□□□□ -1.35
BRCA1-216ENST00000484087 OR52A5Q9H2C5 316 aa6.62□□□□□ -1.35
BRCA1-216ENST00000484087 TRIT1Q9H3H1 467 aaKnown RBP6.62□□□□□ -1.35
BRCA1-216ENST00000484087 MUC13Q9H3R2 512 aa6.62□□□□□ -1.35
BRCA1-216ENST00000484087 RMND5AQ9H871 391 aa6.62□□□□□ -1.35
BRCA1-216ENST00000484087 BRF2Q9HAW0 419 aa6.62□□□□□ -1.35
BRCA1-216ENST00000484087 IL1RL2Q9HB29 575 aa6.62□□□□□ -1.35
BRCA1-216ENST00000484087 ATP13A2Q9NQ11 1180 aa6.62□□□□□ -1.35
BRCA1-216ENST00000484087 FARSBQ9NSD9 589 aaKnown RBP6.62□□□□□ -1.35
BRCA1-216ENST00000484087 INTS7Q9NVH2 962 aaKnown RBP6.62□□□□□ -1.35
BRCA1-216ENST00000484087 SPATA7Q9P0W8 599 aa6.62□□□□□ -1.35
BRCA1-216ENST00000484087 TMEM181Q9P2C4 612 aa6.62□□□□□ -1.35
BRCA1-216ENST00000484087 TDRKHQ9Y2W6 561 aaKnown RBP6.62□□□□□ -1.35
BRCA1-216ENST00000484087 CCL27Q9Y4X3 112 aa6.62□□□□□ -1.35
BRCA1-216ENST00000484087 MN1Q10571 1320 aaPredicted RBP6.62□□□□□ -1.35
BRCA1-216ENST00000484087 FER1L5A0AVI2 2057 aa6.62□□□□□ -1.35
BRCA1-216ENST00000484087 IGHV5-51A0A0C4DH38 117 aa6.61□□□□□ -1.35
BRCA1-216ENST00000484087 OR6C74A6NCV1 312 aa6.61□□□□□ -1.35
BRCA1-216ENST00000484087 BTN3A3O00478 584 aa6.61□□□□□ -1.35
BRCA1-216ENST00000484087 TERTO14746 1132 aaKnown RBP6.61□□□□□ -1.35
BRCA1-216ENST00000484087 NVLO15381 856 aaKnown RBP6.61□□□□□ -1.35
BRCA1-216ENST00000484087 GMNNO75496 209 aa6.61□□□□□ -1.35
BRCA1-216ENST00000484087 KCNH1O95259 989 aa6.61□□□□□ -1.35
BRCA1-216ENST00000484087 C1GALT1C1LP0DN25 315 aa6.61□□□□□ -1.35
BRCA1-216ENST00000484087 PCNAP12004 261 aa6.61□□□□□ -1.35
BRCA1-216ENST00000484087 PVRP15151 417 aa6.61□□□□□ -1.35
BRCA1-216ENST00000484087 CD1EP15812 388 aa6.61□□□□□ -1.35
BRCA1-216ENST00000484087 POLR2CP19387 275 aaPredicted RBP6.61□□□□□ -1.35
BRCA1-216ENST00000484087 TCN1P20061 433 aaPredicted RBP6.61□□□□□ -1.35
BRCA1-216ENST00000484087 CSTF2P33240 577 aaKnown RBP eCLIP6.61□□□□□ -1.35
BRCA1-216ENST00000484087 EPHA4P54764 986 aa6.61□□□□□ -1.35
BRCA1-216ENST00000484087 ACSM2AQ08AH3 577 aa6.61□□□□□ -1.35
BRCA1-216ENST00000484087 DDX39BQ13838 428 aaKnown RBP6.61□□□□□ -1.35
BRCA1-216ENST00000484087 CCNIQ14094 377 aa6.61□□□□□ -1.35
BRCA1-216ENST00000484087 OCLNQ16625 522 aa6.61□□□□□ -1.35
BRCA1-216ENST00000484087 MAPKAPK3Q16644 382 aa6.61□□□□□ -1.35
BRCA1-216ENST00000484087 CYP2A13Q16696 494 aa6.61□□□□□ -1.35
BRCA1-216ENST00000484087 DPY19L1Q2PZI1 675 aa6.61□□□□□ -1.35
BRCA1-216ENST00000484087 CCSMST1Q4G0I0 132 aa6.61□□□□□ -1.35
BRCA1-216ENST00000484087 SPIN4Q56A73 249 aa6.61□□□□□ -1.35
BRCA1-216ENST00000484087 PRAMEF17Q5VTA0 474 aa6.61□□□□□ -1.35
BRCA1-216ENST00000484087 PRAMEF13Q5VWM6 474 aa6.61□□□□□ -1.35
BRCA1-216ENST00000484087 FAM219BQ5XKK7 198 aa6.61□□□□□ -1.35
BRCA1-216ENST00000484087 ATG9BQ674R7 924 aa6.61□□□□□ -1.35
BRCA1-216ENST00000484087 ACSM2BQ68CK6 577 aa6.61□□□□□ -1.35
BRCA1-216ENST00000484087 C8orf82Q6P1X6 216 aaPredicted RBP6.61□□□□□ -1.35
BRCA1-216ENST00000484087 LCTLQ6UWM7 567 aa6.61□□□□□ -1.35
BRCA1-216ENST00000484087 LRRC69Q6ZNQ3 347 aa6.61□□□□□ -1.35
BRCA1-216ENST00000484087 ARHGAP22Q7Z5H3 698 aa6.61□□□□□ -1.35
BRCA1-216ENST00000484087 DHDDSQ86SQ9 333 aa6.61□□□□□ -1.35
BRCA1-216ENST00000484087 DHFR2Q86XF0 187 aa6.61□□□□□ -1.35
BRCA1-216ENST00000484087 TBC1D21Q8IYX1 336 aa6.61□□□□□ -1.35
BRCA1-216ENST00000484087 C2orf73Q8N5S3 287 aaPredicted RBP6.61□□□□□ -1.35
BRCA1-216ENST00000484087 DPP10Q8N608 796 aa6.61□□□□□ -1.35
BRCA1-216ENST00000484087 RNF148Q8N7C7 305 aa6.61□□□□□ -1.35
BRCA1-216ENST00000484087 BHLHE22Q8NFJ8 381 aaPredicted RBP6.61□□□□□ -1.35
BRCA1-216ENST00000484087 OR4E2Q8NGC2 313 aa6.61□□□□□ -1.35
BRCA1-216ENST00000484087 OR52E1Q8NGJ3 308 aa6.61□□□□□ -1.35
BRCA1-216ENST00000484087 OR5K2Q8NHB8 316 aa6.61□□□□□ -1.35
BRCA1-216ENST00000484087 ZNF480Q8WV37 535 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms