RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 HSPA7P48741 367 aa18.56■□□□□ 0.56
HPS4-213ENST00000483631 CLCN2P51788 898 aa18.56■□□□□ 0.56
HPS4-213ENST00000483631 PLTPP55058 493 aa18.56■□□□□ 0.56
HPS4-213ENST00000483631 CASP6P55212 293 aa18.56■□□□□ 0.56
HPS4-213ENST00000483631 PMP22Q01453 160 aa18.56■□□□□ 0.56
HPS4-213ENST00000483631 C2orf54Q08AI8 447 aa18.56■□□□□ 0.56
HPS4-213ENST00000483631 ART3Q13508 389 aa18.56■□□□□ 0.56
HPS4-213ENST00000483631 RUNX2Q13950 521 aa18.56■□□□□ 0.56
HPS4-213ENST00000483631 KBTBD12Q3ZCT8 623 aa18.56■□□□□ 0.56
HPS4-213ENST00000483631 XKR6Q5GH73 641 aa18.56■□□□□ 0.56
HPS4-213ENST00000483631 RPTNQ6XPR3 784 aa18.56■□□□□ 0.56
HPS4-213ENST00000483631 CTAGE3PQ8IX95 158 aa18.56■□□□□ 0.56
HPS4-213ENST00000483631 SPATA6LQ8N4H0 392 aa18.56■□□□□ 0.56
HPS4-213ENST00000483631 KIF2BQ8N4N8 673 aa18.56■□□□□ 0.56
HPS4-213ENST00000483631 APCDD1LQ8NCL9 501 aa18.56■□□□□ 0.56
HPS4-213ENST00000483631 C7orf57Q8NEG2 295 aa18.56■□□□□ 0.56
HPS4-213ENST00000483631 FBXO25Q8TCJ0 367 aa18.56■□□□□ 0.56
HPS4-213ENST00000483631 CCT6BQ92526 530 aa18.56■□□□□ 0.56
HPS4-213ENST00000483631 UBE2E3Q969T4 207 aa18.56■□□□□ 0.56
HPS4-213ENST00000483631 DEFB126Q9BYW3 111 aa18.56■□□□□ 0.56
HPS4-213ENST00000483631 ROGDIQ9GZN7 287 aa18.56■□□□□ 0.56
HPS4-213ENST00000483631 NMRAL1Q9HBL8 299 aa18.56■□□□□ 0.56
HPS4-213ENST00000483631 PRTFDC1Q9NRG1 225 aa18.56■□□□□ 0.56
HPS4-213ENST00000483631 ANKRD10Q9NXR5 420 aa18.56■□□□□ 0.56
HPS4-213ENST00000483631 NUDT4Q9NZJ9 180 aa18.56■□□□□ 0.56
HPS4-213ENST00000483631 RNF112Q9ULX5 631 aa18.56■□□□□ 0.56
HPS4-213ENST00000483631 KLF2Q9Y5W3 355 aaPredicted RBP18.56■□□□□ 0.56
HPS4-213ENST00000483631 CRYBG3Q68DQ2 2970 aa18.55■□□□□ 0.56
HPS4-213ENST00000483631 NCOA6Q14686 2063 aaPredicted RBP18.55■□□□□ 0.56
HPS4-213ENST00000483631 TRGV8A0A0C4DH27 118 aa18.55■□□□□ 0.56
HPS4-213ENST00000483631 NME2P1O60361 137 aa18.55■□□□□ 0.56
HPS4-213ENST00000483631 PRAMEF4O60810 478 aa18.55■□□□□ 0.56
HPS4-213ENST00000483631 SLC25A12O75746 678 aa18.55■□□□□ 0.56
HPS4-213ENST00000483631 NME2P22392 152 aa18.55■□□□□ 0.56
HPS4-213ENST00000483631 MAGEA4P43358 317 aa18.55■□□□□ 0.56
HPS4-213ENST00000483631 HLCSP50747 726 aa18.55■□□□□ 0.56
HPS4-213ENST00000483631 MTTPP55157 894 aa18.55■□□□□ 0.56
HPS4-213ENST00000483631 ALDH6A1Q02252 535 aaKnown RBP18.55■□□□□ 0.56
HPS4-213ENST00000483631 DOC2AQ14183 400 aa18.55■□□□□ 0.56
HPS4-213ENST00000483631 HIST2H2ACQ16777 129 aaPredicted RBP18.55■□□□□ 0.56
HPS4-213ENST00000483631 PRAMEF9Q5VWM5 478 aa18.55■□□□□ 0.56
HPS4-213ENST00000483631 HIST2H2AA3Q6FI13 130 aa18.55■□□□□ 0.56
HPS4-213ENST00000483631 ABHD17CQ6PCB6 329 aa18.55■□□□□ 0.56
HPS4-213ENST00000483631 GALNTL5Q7Z4T8 443 aa18.55■□□□□ 0.56
HPS4-213ENST00000483631 VN1R5Q7Z5H4 357 aa18.55■□□□□ 0.56
HPS4-213ENST00000483631 SNX31Q8N9S9 440 aa18.55■□□□□ 0.56
HPS4-213ENST00000483631 POGLUT1Q8NBL1 392 aa18.55■□□□□ 0.56
HPS4-213ENST00000483631 VMP1Q96GC9 406 aa18.55■□□□□ 0.56
HPS4-213ENST00000483631 CD244Q9BZW8 370 aa18.55■□□□□ 0.56
HPS4-213ENST00000483631 UNKQ9C0B0 810 aaKnown RBP18.55■□□□□ 0.56
HPS4-213ENST00000483631 KLHL1Q9NR64 748 aa18.55■□□□□ 0.56
HPS4-213ENST00000483631 ZNF490Q9ULM2 529 aaPredicted RBP18.55■□□□□ 0.56
HPS4-213ENST00000483631 DAPP1Q9UN19 280 aa18.55■□□□□ 0.56
HPS4-213ENST00000483631 ZNF835Q9Y2P0 537 aa18.55■□□□□ 0.56
HPS4-213ENST00000483631 CLDN16Q9Y5I7 305 aa18.55■□□□□ 0.56
HPS4-213ENST00000483631 CELSR2Q9HCU4 2923 aa18.55■□□□□ 0.56
HPS4-213ENST00000483631 MYO9AB2RTY4 2548 aa18.54■□□□□ 0.56
HPS4-213ENST00000483631 SLC19A2O60779 497 aa18.54■□□□□ 0.56
HPS4-213ENST00000483631 SLC35E2BP0CK96 405 aa18.54■□□□□ 0.56
HPS4-213ENST00000483631 TFEBP19484 476 aa18.54■□□□□ 0.56
HPS4-213ENST00000483631 SERPINB1P30740 379 aa18.54■□□□□ 0.56
HPS4-213ENST00000483631 KCNC1P48547 511 aa18.54■□□□□ 0.56
HPS4-213ENST00000483631 IRF8Q02556 426 aa18.54■□□□□ 0.56
HPS4-213ENST00000483631 GUCY2DQ02846 1103 aa18.54■□□□□ 0.56
HPS4-213ENST00000483631 EFTUD2Q15029 972 aaKnown RBP eCLIP18.54■□□□□ 0.56
HPS4-213ENST00000483631 ZDHHC24Q6UX98 284 aa18.54■□□□□ 0.56
HPS4-213ENST00000483631 Q6ZPB1 254 aaPredicted RBP18.54■□□□□ 0.56
HPS4-213ENST00000483631 TBC1D1Q86TI0 1168 aaPredicted RBP18.54■□□□□ 0.56
HPS4-213ENST00000483631 ISCA2Q86U28 154 aa18.54■□□□□ 0.56
HPS4-213ENST00000483631 TICAM1Q8IUC6 712 aa18.54■□□□□ 0.56
HPS4-213ENST00000483631 SIAH3Q8IW03 269 aa18.54■□□□□ 0.56
HPS4-213ENST00000483631 ZNF808Q8N4W9 903 aaPredicted RBP18.54■□□□□ 0.56
HPS4-213ENST00000483631 PPM1NQ8N819 430 aa18.54■□□□□ 0.56
HPS4-213ENST00000483631 UBTD2Q8WUN7 234 aa18.54■□□□□ 0.56
HPS4-213ENST00000483631 TMEM125Q96AQ2 219 aa18.54■□□□□ 0.56
HPS4-213ENST00000483631 KCNC2Q96PR1 638 aa18.54■□□□□ 0.56
HPS4-213ENST00000483631 HES7Q9BYE0 225 aa18.54■□□□□ 0.56
HPS4-213ENST00000483631 COPS7BQ9H9Q2 264 aaPredicted RBP18.54■□□□□ 0.56
HPS4-213ENST00000483631 LYRM4Q9HD34 91 aa18.54■□□□□ 0.56
HPS4-213ENST00000483631 ADAP2Q9NPF8 381 aa18.54■□□□□ 0.56
HPS4-213ENST00000483631 CCL21O00585 134 aa18.53■□□□□ 0.56
HPS4-213ENST00000483631 CYR61O00622 381 aa18.53■□□□□ 0.56
HPS4-213ENST00000483631 KERAO60938 352 aa18.53■□□□□ 0.56
HPS4-213ENST00000483631 MYO1DO94832 1006 aa18.53■□□□□ 0.56
HPS4-213ENST00000483631 EPORP19235 508 aa18.53■□□□□ 0.56
HPS4-213ENST00000483631 CD22P20273 847 aa18.53■□□□□ 0.56
HPS4-213ENST00000483631 GPR143P51810 404 aa18.53■□□□□ 0.56
HPS4-213ENST00000483631 PLA2G16P53816 162 aa18.53■□□□□ 0.56
HPS4-213ENST00000483631 LIM2P55344 173 aa18.53■□□□□ 0.56
HPS4-213ENST00000483631 CHIT1Q13231 466 aa18.53■□□□□ 0.56
HPS4-213ENST00000483631 TMEM35AQ53FP2 167 aa18.53■□□□□ 0.56
HPS4-213ENST00000483631 ZNF468Q5VIY5 522 aaPredicted RBP18.53■□□□□ 0.56
HPS4-213ENST00000483631 RAPH1Q70E73 1250 aa18.53■□□□□ 0.56
HPS4-213ENST00000483631 RHEBL1Q8TAI7 183 aa18.53■□□□□ 0.56
HPS4-213ENST00000483631 FBF1Q8TES7 1133 aa18.53■□□□□ 0.56
HPS4-213ENST00000483631 ITLN2Q8WWU7 325 aaPredicted RBP18.53■□□□□ 0.56
HPS4-213ENST00000483631 CCDC120Q96HB5 630 aa18.53■□□□□ 0.56
HPS4-213ENST00000483631 ATOH8Q96SQ7 321 aa18.53■□□□□ 0.56
HPS4-213ENST00000483631 TBCDQ9BTW9 1192 aa18.53■□□□□ 0.56
HPS4-213ENST00000483631 PRDM7Q9NQW5 492 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms