RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 PELI2Q9HAT8 420 aa12.95□□□□□ -0.34
VARS-226ENST00000483275 CLDN16Q9Y5I7 305 aa12.95□□□□□ -0.34
VARS-226ENST00000483275 FLNAP21333 2647 aaKnown RBP12.94□□□□□ -0.34
VARS-226ENST00000483275 ANKHD1Q8IWZ3 2542 aaKnown RBP12.94□□□□□ -0.34
VARS-226ENST00000483275 NCF1BA6NI72 391 aaPredicted RBP12.94□□□□□ -0.34
VARS-226ENST00000483275 TMEM200CA6NKL6 621 aa12.94□□□□□ -0.34
VARS-226ENST00000483275 NCF1CA8MVU1 366 aaPredicted RBP12.94□□□□□ -0.34
VARS-226ENST00000483275 NPIPA2E9PIF3 369 aa12.94□□□□□ -0.34
VARS-226ENST00000483275 NPIPA3F8WFD2 350 aa12.94□□□□□ -0.34
VARS-226ENST00000483275 KLRC4-KLRK1H3BQV0 150 aa12.94□□□□□ -0.34
VARS-226ENST00000483275 WWP2O00308 870 aa12.94□□□□□ -0.34
VARS-226ENST00000483275 ZSCAN12O43309 604 aa12.94□□□□□ -0.34
VARS-226ENST00000483275 ERI3O43414 337 aaKnown RBP12.94□□□□□ -0.34
VARS-226ENST00000483275 NCF1P14598 390 aaPredicted RBP12.94□□□□□ -0.34
VARS-226ENST00000483275 IGFBP2P18065 325 aa12.94□□□□□ -0.34
VARS-226ENST00000483275 SOX3P41225 446 aa12.94□□□□□ -0.34
VARS-226ENST00000483275 ELK3P41970 407 aa12.94□□□□□ -0.34
VARS-226ENST00000483275 SSR4P51571 173 aa12.94□□□□□ -0.34
VARS-226ENST00000483275 NUP107P57740 925 aa12.94□□□□□ -0.34
VARS-226ENST00000483275 PMPCAQ10713 525 aa12.94□□□□□ -0.34
VARS-226ENST00000483275 SLBPQ14493 270 aaKnown RBP eCLIP12.94□□□□□ -0.34
VARS-226ENST00000483275 XKR6Q5GH73 641 aa12.94□□□□□ -0.34
VARS-226ENST00000483275 IL20RBQ6UXL0 311 aa12.94□□□□□ -0.34
VARS-226ENST00000483275 SPNS3Q6ZMD2 512 aa12.94□□□□□ -0.34
VARS-226ENST00000483275 TMEM200AQ86VY9 491 aa12.94□□□□□ -0.34
VARS-226ENST00000483275 SCUBE1Q8IWY4 988 aa12.94□□□□□ -0.34
VARS-226ENST00000483275 ARMC10Q8N2F6 343 aa12.94□□□□□ -0.34
VARS-226ENST00000483275 ZNF321PQ8N8H1 164 aa12.94□□□□□ -0.34
VARS-226ENST00000483275 ZFP62Q8NB50 900 aaPredicted RBP12.94□□□□□ -0.34
VARS-226ENST00000483275 POGLUT1Q8NBL1 392 aa12.94□□□□□ -0.34
VARS-226ENST00000483275 ARMC2Q8NEN0 867 aa12.94□□□□□ -0.34
VARS-226ENST00000483275 TRPV3Q8NET8 790 aa12.94□□□□□ -0.34
VARS-226ENST00000483275 ATL1Q8WXF7 558 aa12.94□□□□□ -0.34
VARS-226ENST00000483275 EGFL8Q99944 293 aa12.94□□□□□ -0.34
VARS-226ENST00000483275 DDX47Q9H0S4 455 aaKnown RBP12.94□□□□□ -0.34
VARS-226ENST00000483275 PNPLA3Q9NST1 481 aa12.94□□□□□ -0.34
VARS-226ENST00000483275 ERVK-11Q9UQG0 969 aa12.94□□□□□ -0.34
VARS-226ENST00000483275 ZNF469Q96JG9 3925 aaPredicted RBP12.94□□□□□ -0.34
VARS-226ENST00000483275 NAV3Q8IVL0 2385 aa12.93□□□□□ -0.34
VARS-226ENST00000483275 ARHGAP21Q5T5U3 1957 aa12.93□□□□□ -0.34
VARS-226ENST00000483275 DNALI1O14645 258 aaPredicted RBP12.93□□□□□ -0.34
VARS-226ENST00000483275 FANCGO15287 622 aa12.93□□□□□ -0.34
VARS-226ENST00000483275 PIAS1O75925 651 aa12.93□□□□□ -0.34
VARS-226ENST00000483275 TOXO94900 526 aa12.93□□□□□ -0.34
VARS-226ENST00000483275 WDR47O94967 919 aa12.93□□□□□ -0.34
VARS-226ENST00000483275 TUBB4AP04350 444 aa12.93□□□□□ -0.34
VARS-226ENST00000483275 SERPINA6P08185 405 aa12.93□□□□□ -0.34
VARS-226ENST00000483275 ZNF37AP17032 561 aaPredicted RBP12.93□□□□□ -0.34
VARS-226ENST00000483275 CERS1P27544 350 aa12.93□□□□□ -0.34
VARS-226ENST00000483275 CHRNB4P30926 498 aa12.93□□□□□ -0.34
VARS-226ENST00000483275 PLA2G16P53816 162 aa12.93□□□□□ -0.34
VARS-226ENST00000483275 PPIAP62937 165 aaKnown RBP12.93□□□□□ -0.34
VARS-226ENST00000483275 PLGLB1Q02325 96 aa12.93□□□□□ -0.34
VARS-226ENST00000483275 ID2Q02363 134 aa12.93□□□□□ -0.34
VARS-226ENST00000483275 SLC13A2Q13183 592 aa12.93□□□□□ -0.34
VARS-226ENST00000483275 SNTB1Q13884 538 aaKnown RBP12.93□□□□□ -0.34
VARS-226ENST00000483275 TSNQ15631 228 aaKnown RBP12.93□□□□□ -0.34
VARS-226ENST00000483275 FAM45BPQ6NSW5 357 aa12.93□□□□□ -0.34
VARS-226ENST00000483275 KIAA0408Q6ZU52 694 aa12.93□□□□□ -0.34
VARS-226ENST00000483275 VN1R5Q7Z5H4 357 aa12.93□□□□□ -0.34
VARS-226ENST00000483275 ANKMY2Q8IV38 441 aa12.93□□□□□ -0.34
VARS-226ENST00000483275 PSD4Q8NDX1 1056 aa12.93□□□□□ -0.34
VARS-226ENST00000483275 OR5M3Q8NGP4 307 aa12.93□□□□□ -0.34
VARS-226ENST00000483275 C16orf52Q8NHV5 167 aa12.93□□□□□ -0.34
VARS-226ENST00000483275 FAM45AQ8TCE6 357 aa12.93□□□□□ -0.34
VARS-226ENST00000483275 ANKRD49Q8WVL7 239 aa12.93□□□□□ -0.34
VARS-226ENST00000483275 VMP1Q96GC9 406 aa12.93□□□□□ -0.34
VARS-226ENST00000483275 PBKQ96KB5 322 aa12.93□□□□□ -0.34
VARS-226ENST00000483275 PRTFDC1Q9NRG1 225 aa12.93□□□□□ -0.34
VARS-226ENST00000483275 VWA7Q9Y334 891 aa12.93□□□□□ -0.34
VARS-226ENST00000483275 PRRC2AP48634 2157 aaKnown RBP12.93□□□□□ -0.34
VARS-226ENST00000483275 FREM3P0C091 2139 aa12.92□□□□□ -0.34
VARS-226ENST00000483275 USP27XA6NNY8 438 aa12.92□□□□□ -0.34
VARS-226ENST00000483275 A8MVJ9 347 aa12.92□□□□□ -0.34
VARS-226ENST00000483275 ZNF354AO60765 605 aaPredicted RBP12.92□□□□□ -0.34
VARS-226ENST00000483275 TTC4O95801 387 aa12.92□□□□□ -0.34
VARS-226ENST00000483275 CELA3AP09093 270 aa12.92□□□□□ -0.34
VARS-226ENST00000483275 ENO2P09104 434 aaPredicted RBP12.92□□□□□ -0.34
VARS-226ENST00000483275 CAPN3P20807 821 aa12.92□□□□□ -0.34
VARS-226ENST00000483275 MSX1P28360 303 aa12.92□□□□□ -0.34
VARS-226ENST00000483275 FNTAP49354 379 aa12.92□□□□□ -0.34
VARS-226ENST00000483275 ART1P52961 327 aa12.92□□□□□ -0.34
VARS-226ENST00000483275 ZNF750Q32MQ0 723 aa12.92□□□□□ -0.34
VARS-226ENST00000483275 ARHGAP11AQ6P4F7 1023 aa12.92□□□□□ -0.34
VARS-226ENST00000483275 SLCO4C1Q6ZQN7 724 aa12.92□□□□□ -0.34
VARS-226ENST00000483275 KLHDC8AQ8IYD2 350 aa12.92□□□□□ -0.34
VARS-226ENST00000483275 EID3Q8N140 333 aa12.92□□□□□ -0.34
VARS-226ENST00000483275 SPATA6LQ8N4H0 392 aa12.92□□□□□ -0.34
VARS-226ENST00000483275 OR2M7Q8NG81 312 aa12.92□□□□□ -0.34
VARS-226ENST00000483275 LILRB4Q8NHJ6 448 aa12.92□□□□□ -0.34
VARS-226ENST00000483275 GRK7Q8WTQ7 553 aa12.92□□□□□ -0.34
VARS-226ENST00000483275 ASB15Q8WXK1 588 aa12.92□□□□□ -0.34
VARS-226ENST00000483275 RND1Q92730 232 aa12.92□□□□□ -0.34
VARS-226ENST00000483275 GAL3ST3Q96A11 431 aa12.92□□□□□ -0.34
VARS-226ENST00000483275 MS4A6EQ96DS6 147 aa12.92□□□□□ -0.34
VARS-226ENST00000483275 FAR2Q96K12 515 aa12.92□□□□□ -0.34
VARS-226ENST00000483275 QRFPRQ96P65 431 aa12.92□□□□□ -0.34
VARS-226ENST00000483275 OSBPL9Q96SU4 736 aa12.92□□□□□ -0.34
VARS-226ENST00000483275 CCDC77Q9BR77 488 aa12.92□□□□□ -0.34
VARS-226ENST00000483275 TP63Q9H3D4 680 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms