RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 RMND5AQ9H871 391 aa7.43□□□□□ -1.22
SNX13-208ENST00000482558 SPHK2Q9NRA0 654 aa7.43□□□□□ -1.22
SNX13-208ENST00000482558 ADPRHL2Q9NX46 363 aa7.43□□□□□ -1.22
SNX13-208ENST00000482558 SH3BGRL2Q9UJC5 107 aa7.43□□□□□ -1.22
SNX13-208ENST00000482558 ZNF225Q9UK10 706 aa7.43□□□□□ -1.22
SNX13-208ENST00000482558 IKZF3Q9UKT9 509 aa7.43□□□□□ -1.22
SNX13-208ENST00000482558 INTS6Q9UL03 887 aaKnown RBP7.43□□□□□ -1.22
SNX13-208ENST00000482558 BTRCQ9Y297 605 aa7.43□□□□□ -1.22
SNX13-208ENST00000482558 TIMM22Q9Y584 194 aa7.43□□□□□ -1.22
SNX13-208ENST00000482558 AP4B1Q9Y6B7 739 aa7.43□□□□□ -1.22
SNX13-208ENST00000482558 NPIPB15A6NHN6 443 aaPredicted RBP7.42□□□□□ -1.22
SNX13-208ENST00000482558 H0Y858 1186 aa7.42□□□□□ -1.22
SNX13-208ENST00000482558 FXYD1O00168 92 aa7.42□□□□□ -1.22
SNX13-208ENST00000482558 PPP6CO00743 305 aa7.42□□□□□ -1.22
SNX13-208ENST00000482558 NME4O00746 187 aa7.42□□□□□ -1.22
SNX13-208ENST00000482558 OR7A17O14581 309 aa7.42□□□□□ -1.22
SNX13-208ENST00000482558 PER2O15055 1255 aa7.42□□□□□ -1.22
SNX13-208ENST00000482558 ERN1O75460 977 aaKnown RBP7.42□□□□□ -1.22
SNX13-208ENST00000482558 LINGO3P0C6S8 592 aa7.42□□□□□ -1.22
SNX13-208ENST00000482558 PABPC4LP0CB38 370 aaKnown RBP7.42□□□□□ -1.22
SNX13-208ENST00000482558 UBTFL6P0CB48 400 aaPredicted RBP7.42□□□□□ -1.22
SNX13-208ENST00000482558 RPS2P15880 293 aaKnown RBP7.42□□□□□ -1.22
SNX13-208ENST00000482558 NPPBP16860 134 aa7.42□□□□□ -1.22
SNX13-208ENST00000482558 ZNF26P17031 533 aaPredicted RBP7.42□□□□□ -1.22
SNX13-208ENST00000482558 IL1RNP18510 177 aa7.42□□□□□ -1.22
SNX13-208ENST00000482558 HLA-FP30511 346 aa7.42□□□□□ -1.22
SNX13-208ENST00000482558 GRIA3P42263 894 aa7.42□□□□□ -1.22
SNX13-208ENST00000482558 DIO3P55073 304 aa7.42□□□□□ -1.22
SNX13-208ENST00000482558 ST8SIA6P61647 398 aa7.42□□□□□ -1.22
SNX13-208ENST00000482558 TXNL4AP83876 142 aaKnown RBP7.42□□□□□ -1.22
SNX13-208ENST00000482558 LIPEQ05469 1076 aa7.42□□□□□ -1.22
SNX13-208ENST00000482558 LRRC74AQ0VAA2 488 aa7.42□□□□□ -1.22
SNX13-208ENST00000482558 ABRQ12979 859 aa7.42□□□□□ -1.22
SNX13-208ENST00000482558 BOP1Q14137 746 aaKnown RBP7.42□□□□□ -1.22
SNX13-208ENST00000482558 MYBPC3Q14896 1274 aa7.42□□□□□ -1.22
SNX13-208ENST00000482558 ADIPOQQ15848 244 aa7.42□□□□□ -1.22
SNX13-208ENST00000482558 LRRC36Q1X8D7 754 aa7.42□□□□□ -1.22
SNX13-208ENST00000482558 ZNF674Q2M3X9 581 aa7.42□□□□□ -1.22
SNX13-208ENST00000482558 ZNF284Q2VY69 593 aa7.42□□□□□ -1.22
SNX13-208ENST00000482558 FUT11Q495W5 492 aa7.42□□□□□ -1.22
SNX13-208ENST00000482558 LIN52Q52LA3 116 aa7.42□□□□□ -1.22
SNX13-208ENST00000482558 SLC44A4Q53GD3 710 aa7.42□□□□□ -1.22
SNX13-208ENST00000482558 LIPJQ5W064 366 aa7.42□□□□□ -1.22
SNX13-208ENST00000482558 IYDQ6PHW0 289 aa7.42□□□□□ -1.22
SNX13-208ENST00000482558 UGT2A3Q6UWM9 527 aa7.42□□□□□ -1.22
SNX13-208ENST00000482558 LAYNQ6UX15 382 aa7.42□□□□□ -1.22
SNX13-208ENST00000482558 ZBTB49Q6ZSB9 765 aa7.42□□□□□ -1.22
SNX13-208ENST00000482558 NUP54Q7Z3B4 507 aa7.42□□□□□ -1.22
SNX13-208ENST00000482558 CELF5Q8N6W0 485 aaKnown RBP7.42□□□□□ -1.22
SNX13-208ENST00000482558 RNF148Q8N7C7 305 aa7.42□□□□□ -1.22
SNX13-208ENST00000482558 PNPLA1Q8N8W4 532 aa7.42□□□□□ -1.22
SNX13-208ENST00000482558 L3MBTL4Q8NA19 623 aa7.42□□□□□ -1.22
SNX13-208ENST00000482558 GPR26Q8NDV2 337 aa7.42□□□□□ -1.22
SNX13-208ENST00000482558 DDHD1Q8NEL9 900 aa7.42□□□□□ -1.22
SNX13-208ENST00000482558 OR52B6Q8NGF0 335 aa7.42□□□□□ -1.22
SNX13-208ENST00000482558 PROKR1Q8TCW9 393 aa7.42□□□□□ -1.22
SNX13-208ENST00000482558 CSGALNACT1Q8TDX6 532 aa7.42□□□□□ -1.22
SNX13-208ENST00000482558 MOGAT1Q96PD6 335 aa7.42□□□□□ -1.22
SNX13-208ENST00000482558 VPS35Q96QK1 796 aa7.42□□□□□ -1.22
SNX13-208ENST00000482558 TSC22D3Q99576 134 aa7.42□□□□□ -1.22
SNX13-208ENST00000482558 C17orf80Q9BSJ5 609 aa7.42□□□□□ -1.22
SNX13-208ENST00000482558 BDH2Q9BUT1 245 aa7.42□□□□□ -1.22
SNX13-208ENST00000482558 ACAT2Q9BWD1 397 aa7.42□□□□□ -1.22
SNX13-208ENST00000482558 OSBPL10Q9BXB5 764 aa7.42□□□□□ -1.22
SNX13-208ENST00000482558 UGT2B28Q9BY64 529 aa7.42□□□□□ -1.22
SNX13-208ENST00000482558 YTHDF1Q9BYJ9 559 aaKnown RBP7.42□□□□□ -1.22
SNX13-208ENST00000482558 DPY30Q9C005 99 aa7.42□□□□□ -1.22
SNX13-208ENST00000482558 ZDHHC6Q9H6R6 413 aa7.42□□□□□ -1.22
SNX13-208ENST00000482558 LRTM1Q9HBL6 345 aa7.42□□□□□ -1.22
SNX13-208ENST00000482558 VCX3AQ9NNX9 186 aa7.42□□□□□ -1.22
SNX13-208ENST00000482558 TLR9Q9NR96 1032 aa7.42□□□□□ -1.22
SNX13-208ENST00000482558 RXFP3Q9NSD7 469 aa7.42□□□□□ -1.22
SNX13-208ENST00000482558 TBCCD1Q9NVR7 557 aa7.42□□□□□ -1.22
SNX13-208ENST00000482558 C1orf109Q9NX04 203 aa7.42□□□□□ -1.22
SNX13-208ENST00000482558 CMTM6Q9NX76 183 aa7.42□□□□□ -1.22
SNX13-208ENST00000482558 ARL15Q9NXU5 204 aa7.42□□□□□ -1.22
SNX13-208ENST00000482558 TUBA8Q9NY65 449 aaPredicted RBP7.42□□□□□ -1.22
SNX13-208ENST00000482558 RABL2AQ9UBK7 228 aaPredicted RBP7.42□□□□□ -1.22
SNX13-208ENST00000482558 MBD1Q9UIS9 605 aaPredicted RBP7.42□□□□□ -1.22
SNX13-208ENST00000482558 ANAPC2Q9UJX6 822 aa7.42□□□□□ -1.22
SNX13-208ENST00000482558 DUSP12Q9UNI6 340 aa7.42□□□□□ -1.22
SNX13-208ENST00000482558 ERVW-1Q9UQF0 538 aa7.42□□□□□ -1.22
SNX13-208ENST00000482558 AP1M2Q9Y6Q5 423 aa7.42□□□□□ -1.22
SNX13-208ENST00000482558 PIAS3Q9Y6X2 628 aa7.42□□□□□ -1.22
SNX13-208ENST00000482558 HELZP42694 1942 aaKnown RBP7.42□□□□□ -1.22
SNX13-208ENST00000482558 ARHGAP10A1A4S6 786 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 IQCF5A8MTL0 148 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 NEDD8-MDP1E9PL57 170 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 GFYI3L273 518 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 MANBAO00462 879 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 ARPC2O15144 300 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 CCL16O15467 120 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 TAPBPO15533 448 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 FMO6PO60774 539 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 RNASEH1O60930 286 aaKnown RBP7.41□□□□□ -1.22
SNX13-208ENST00000482558 SCELO95171 688 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 PRAMEF12O95522 483 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 CLPTM1O96005 669 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 NTRK1P04629 796 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 UGT2B4P06133 528 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms