RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 ILF2Q12905 390 aaKnown RBP9.8□□□□□ -0.84
CPSF4-212ENST00000482251 SLC13A2Q13183 592 aa9.8□□□□□ -0.84
CPSF4-212ENST00000482251 DDX39BQ13838 428 aaKnown RBP9.8□□□□□ -0.84
CPSF4-212ENST00000482251 LRRC70Q7Z2Q7 622 aa9.8□□□□□ -0.84
CPSF4-212ENST00000482251 GALNTL5Q7Z4T8 443 aa9.8□□□□□ -0.84
CPSF4-212ENST00000482251 ISCA2Q86U28 154 aa9.8□□□□□ -0.84
CPSF4-212ENST00000482251 MYLK4Q86YV6 388 aaPredicted RBP9.8□□□□□ -0.84
CPSF4-212ENST00000482251 RNF175Q8N4F7 328 aa9.8□□□□□ -0.84
CPSF4-212ENST00000482251 ARMC2Q8NEN0 867 aa9.8□□□□□ -0.84
CPSF4-212ENST00000482251 OR2L5Q8NG80 312 aa9.8□□□□□ -0.84
CPSF4-212ENST00000482251 ELP5Q8TE02 316 aa9.8□□□□□ -0.84
CPSF4-212ENST00000482251 QRFPRQ96P65 431 aa9.8□□□□□ -0.84
CPSF4-212ENST00000482251 F2RL3Q96RI0 385 aa9.8□□□□□ -0.84
CPSF4-212ENST00000482251 ATOH8Q96SQ7 321 aa9.8□□□□□ -0.84
CPSF4-212ENST00000482251 PRTFDC1Q9NRG1 225 aa9.8□□□□□ -0.84
CPSF4-212ENST00000482251 SNX15Q9NRS6 342 aa9.8□□□□□ -0.84
CPSF4-212ENST00000482251 ZDHHC18Q9NUE0 388 aa9.8□□□□□ -0.84
CPSF4-212ENST00000482251 NINJ2Q9NZG7 142 aa9.8□□□□□ -0.84
CPSF4-212ENST00000482251 SEC14L3Q9UDX4 400 aa9.8□□□□□ -0.84
CPSF4-212ENST00000482251 ZNF490Q9ULM2 529 aaPredicted RBP9.8□□□□□ -0.84
CPSF4-212ENST00000482251 NOTCH2Q04721 2471 aa9.8□□□□□ -0.84
CPSF4-212ENST00000482251 DOPEY1Q5JWR5 2465 aa9.8□□□□□ -0.84
CPSF4-212ENST00000482251 POLEQ07864 2286 aa9.79□□□□□ -0.84
CPSF4-212ENST00000482251 A0A088AWK7 358 aa9.79□□□□□ -0.84
CPSF4-212ENST00000482251 WIPF3A6NGB9 483 aa9.79□□□□□ -0.84
CPSF4-212ENST00000482251 LRRC14BA6NHZ5 514 aa9.79□□□□□ -0.84
CPSF4-212ENST00000482251 ZNHIT1O43257 154 aa9.79□□□□□ -0.84
CPSF4-212ENST00000482251 ACSL3O95573 720 aa9.79□□□□□ -0.84
CPSF4-212ENST00000482251 CRYABP02511 175 aaKnown RBP9.79□□□□□ -0.84
CPSF4-212ENST00000482251 ZNF10P21506 573 aaPredicted RBP9.79□□□□□ -0.84
CPSF4-212ENST00000482251 CRABP2P29373 138 aa9.79□□□□□ -0.84
CPSF4-212ENST00000482251 EEF1DP29692 281 aaKnown RBP9.79□□□□□ -0.84
CPSF4-212ENST00000482251 MTTPP55157 894 aa9.79□□□□□ -0.84
CPSF4-212ENST00000482251 LIM2P55344 173 aa9.79□□□□□ -0.84
CPSF4-212ENST00000482251 ID2Q02363 134 aa9.79□□□□□ -0.84
CPSF4-212ENST00000482251 NAB1Q13506 487 aa9.79□□□□□ -0.84
CPSF4-212ENST00000482251 PAGE2BQ5JRK9 111 aa9.79□□□□□ -0.84
CPSF4-212ENST00000482251 ABHD17CQ6PCB6 329 aa9.79□□□□□ -0.84
CPSF4-212ENST00000482251 ZNF793Q6ZN11 406 aa9.79□□□□□ -0.84
CPSF4-212ENST00000482251 CYS1Q717R9 158 aa9.79□□□□□ -0.84
CPSF4-212ENST00000482251 RPS19BP1Q86WX3 136 aaKnown RBP9.79□□□□□ -0.84
CPSF4-212ENST00000482251 SCUBE1Q8IWY4 988 aa9.79□□□□□ -0.84
CPSF4-212ENST00000482251 CENPLQ8N0S6 344 aaPredicted RBP9.79□□□□□ -0.84
CPSF4-212ENST00000482251 NOA1Q8NC60 698 aaKnown RBP9.79□□□□□ -0.84
CPSF4-212ENST00000482251 NFAM1Q8NET5 270 aaPredicted RBP9.79□□□□□ -0.84
CPSF4-212ENST00000482251 STAG3L4Q8TBR4 150 aa9.79□□□□□ -0.84
CPSF4-212ENST00000482251 NCLNQ969V3 563 aa9.79□□□□□ -0.84
CPSF4-212ENST00000482251 FRMD6Q96NE9 622 aa9.79□□□□□ -0.84
CPSF4-212ENST00000482251 EFCAB11Q9BUY7 163 aa9.79□□□□□ -0.84
CPSF4-212ENST00000482251 SORBS1Q9BX66 1292 aaKnown RBP9.79□□□□□ -0.84
CPSF4-212ENST00000482251 CAPS2Q9BXY5 557 aa9.79□□□□□ -0.84
CPSF4-212ENST00000482251 CD244Q9BZW8 370 aa9.79□□□□□ -0.84
CPSF4-212ENST00000482251 EHD1Q9H4M9 534 aa9.79□□□□□ -0.84
CPSF4-212ENST00000482251 NMRAL1Q9HBL8 299 aa9.79□□□□□ -0.84
CPSF4-212ENST00000482251 LRFN1Q9P244 771 aa9.79□□□□□ -0.84
CPSF4-212ENST00000482251 COPG2Q9UBF2 871 aa9.79□□□□□ -0.84
CPSF4-212ENST00000482251 OPTCQ9UBM4 332 aa9.79□□□□□ -0.84
CPSF4-212ENST00000482251 FBXW2Q9UKT8 454 aa9.79□□□□□ -0.84
CPSF4-212ENST00000482251 DIDO1Q9BTC0 2240 aaKnown RBP9.79□□□□□ -0.84
CPSF4-212ENST00000482251 A0A087X1B8 175 aa9.78□□□□□ -0.84
CPSF4-212ENST00000482251 HMX2A2RU54 273 aa9.78□□□□□ -0.84
CPSF4-212ENST00000482251 NPIPA5E9PKD4 350 aa9.78□□□□□ -0.84
CPSF4-212ENST00000482251 K7EPI3 171 aa9.78□□□□□ -0.84
CPSF4-212ENST00000482251 PRKNO60260 465 aaPredicted RBP9.78□□□□□ -0.84
CPSF4-212ENST00000482251 LDB3O75112 727 aa9.78□□□□□ -0.84
CPSF4-212ENST00000482251 SLC25A12O75746 678 aa9.78□□□□□ -0.84
CPSF4-212ENST00000482251 NEURL1O76050 574 aa9.78□□□□□ -0.84
CPSF4-212ENST00000482251 TGFB1P01137 390 aa9.78□□□□□ -0.84
CPSF4-212ENST00000482251 IFNA16P05015 189 aa9.78□□□□□ -0.84
CPSF4-212ENST00000482251 C2P06681 752 aa9.78□□□□□ -0.84
CPSF4-212ENST00000482251 STSP08842 583 aa9.78□□□□□ -0.84
CPSF4-212ENST00000482251 MYBL2P10244 700 aa9.78□□□□□ -0.84
CPSF4-212ENST00000482251 GFAPP14136 432 aa9.78□□□□□ -0.84
CPSF4-212ENST00000482251 CD46P15529 392 aa9.78□□□□□ -0.84
CPSF4-212ENST00000482251 GSTM2P28161 218 aa9.78□□□□□ -0.84
CPSF4-212ENST00000482251 DCTP40126 519 aa9.78□□□□□ -0.84
CPSF4-212ENST00000482251 RFC3P40938 356 aa9.78□□□□□ -0.84
CPSF4-212ENST00000482251 SERPINB8P50452 374 aa9.78□□□□□ -0.84
CPSF4-212ENST00000482251 PER3P56645 1201 aa9.78□□□□□ -0.84
CPSF4-212ENST00000482251 HSF1Q00613 529 aa9.78□□□□□ -0.84
CPSF4-212ENST00000482251 MAPKAPK3Q16644 382 aa9.78□□□□□ -0.84
CPSF4-212ENST00000482251 HIST2H2ACQ16777 129 aaPredicted RBP9.78□□□□□ -0.84
CPSF4-212ENST00000482251 PFKFB4Q16877 469 aa9.78□□□□□ -0.84
CPSF4-212ENST00000482251 ADPRMQ3LIE5 342 aa9.78□□□□□ -0.84
CPSF4-212ENST00000482251 CDKL4Q5MAI5 379 aa9.78□□□□□ -0.84
CPSF4-212ENST00000482251 HIST2H2AA3Q6FI13 130 aa9.78□□□□□ -0.84
CPSF4-212ENST00000482251 C16orf47Q6ZP98 133 aaPredicted RBP9.78□□□□□ -0.84
CPSF4-212ENST00000482251 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.78□□□□□ -0.84
CPSF4-212ENST00000482251 CPSF7Q8N684 471 aaKnown RBP9.78□□□□□ -0.84
CPSF4-212ENST00000482251 TEX9Q8N6V9 391 aa9.78□□□□□ -0.84
CPSF4-212ENST00000482251 TMEM178AQ8NBL3 297 aa9.78□□□□□ -0.84
CPSF4-212ENST00000482251 APCDD1LQ8NCL9 501 aa9.78□□□□□ -0.84
CPSF4-212ENST00000482251 B3GNT7Q8NFL0 401 aa9.78□□□□□ -0.84
CPSF4-212ENST00000482251 UHMK1Q8TAS1 419 aaKnown RBP9.78□□□□□ -0.84
CPSF4-212ENST00000482251 UBTD2Q8WUN7 234 aa9.78□□□□□ -0.84
CPSF4-212ENST00000482251 WDR34Q96EX3 536 aa9.78□□□□□ -0.84
CPSF4-212ENST00000482251 SCMH1Q96GD3 660 aa9.78□□□□□ -0.84
CPSF4-212ENST00000482251 SERINC2Q96SA4 455 aa9.78□□□□□ -0.84
CPSF4-212ENST00000482251 MAPKAP1Q9BPZ7 522 aa9.78□□□□□ -0.84
CPSF4-212ENST00000482251 MS4A8Q9BY19 250 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms