RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 ANGPTL1O95841 491 aa4.76□□□□□ -1.65
SF3B1-210ENST00000482158 RPLP0P05388 317 aaKnown RBP4.76□□□□□ -1.65
SF3B1-210ENST00000482158 SMSP52788 366 aa4.76□□□□□ -1.65
SF3B1-210ENST00000482158 TEFQ10587 303 aa4.76□□□□□ -1.65
SF3B1-210ENST00000482158 RPA4Q13156 261 aa4.76□□□□□ -1.65
SF3B1-210ENST00000482158 NFATC2Q13469 925 aa4.76□□□□□ -1.65
SF3B1-210ENST00000482158 LY6DQ14210 128 aa4.76□□□□□ -1.65
SF3B1-210ENST00000482158 C3AR1Q16581 482 aa4.76□□□□□ -1.65
SF3B1-210ENST00000482158 C2orf76Q3KRA6 126 aa4.76□□□□□ -1.65
SF3B1-210ENST00000482158 IFI44LQ53G44 452 aa4.76□□□□□ -1.65
SF3B1-210ENST00000482158 PLBD1Q6P4A8 553 aa4.76□□□□□ -1.65
SF3B1-210ENST00000482158 SERPINA12Q8IW75 414 aa4.76□□□□□ -1.65
SF3B1-210ENST00000482158 THEM5Q8N1Q8 247 aa4.76□□□□□ -1.65
SF3B1-210ENST00000482158 OR9Q2Q8NGE9 314 aa4.76□□□□□ -1.65
SF3B1-210ENST00000482158 GPR148Q8TDV2 347 aa4.76□□□□□ -1.65
SF3B1-210ENST00000482158 ST7LQ8TDW4 575 aa4.76□□□□□ -1.65
SF3B1-210ENST00000482158 GTF3AQ92664 365 aaKnown RBP4.76□□□□□ -1.65
SF3B1-210ENST00000482158 PRICKLE1Q96MT3 831 aaPredicted RBP4.76□□□□□ -1.65
SF3B1-210ENST00000482158 NTMT1Q9BV86 223 aa4.76□□□□□ -1.65
SF3B1-210ENST00000482158 TSPYL1Q9H0U9 437 aa4.76□□□□□ -1.65
SF3B1-210ENST00000482158 C3orf14Q9HBI5 128 aa4.76□□□□□ -1.65
SF3B1-210ENST00000482158 THAP10Q9P2Z0 257 aaPredicted RBP4.76□□□□□ -1.65
SF3B1-210ENST00000482158 FOXA2Q9Y261 457 aaPredicted RBP4.76□□□□□ -1.65
SF3B1-210ENST00000482158 IGHV3-38A0A0C4DH36 116 aa4.75□□□□□ -1.65
SF3B1-210ENST00000482158 SLC15A5A6NIM6 579 aa4.75□□□□□ -1.65
SF3B1-210ENST00000482158 SOCS3O14543 225 aa4.75□□□□□ -1.65
SF3B1-210ENST00000482158 CHUKO15111 745 aa4.75□□□□□ -1.65
SF3B1-210ENST00000482158 OLFM2O95897 454 aa4.75□□□□□ -1.65
SF3B1-210ENST00000482158 ZNF883P0CG24 379 aa4.75□□□□□ -1.65
SF3B1-210ENST00000482158 UGT1A4P22310 534 aa4.75□□□□□ -1.65
SF3B1-210ENST00000482158 TNFSF10P50591 281 aa4.75□□□□□ -1.65
SF3B1-210ENST00000482158 TMEM50BP56557 158 aa4.75□□□□□ -1.65
SF3B1-210ENST00000482158 NPRL3Q12980 569 aa4.75□□□□□ -1.65
SF3B1-210ENST00000482158 GK2Q14410 553 aaPredicted RBP4.75□□□□□ -1.65
SF3B1-210ENST00000482158 TMEM64Q6YI46 380 aa4.75□□□□□ -1.65
SF3B1-210ENST00000482158 GDPGP1Q6ZNW5 385 aa4.75□□□□□ -1.65
SF3B1-210ENST00000482158 RFPL4BQ6ZWI9 263 aa4.75□□□□□ -1.65
SF3B1-210ENST00000482158 CYP4V2Q6ZWL3 525 aaPredicted RBP4.75□□□□□ -1.65
SF3B1-210ENST00000482158 LRRTM1Q86UE6 522 aa4.75□□□□□ -1.65
SF3B1-210ENST00000482158 NLRP14Q86W24 1093 aa4.75□□□□□ -1.65
SF3B1-210ENST00000482158 TRPV3Q8NET8 790 aa4.75□□□□□ -1.65
SF3B1-210ENST00000482158 OR10G7Q8NGN6 311 aa4.75□□□□□ -1.65
SF3B1-210ENST00000482158 SPATA18Q8TC71 538 aa4.75□□□□□ -1.65
SF3B1-210ENST00000482158 ZNF599Q96NL3 588 aa4.75□□□□□ -1.65
SF3B1-210ENST00000482158 PRAM1Q96QH2 718 aa4.75□□□□□ -1.65
SF3B1-210ENST00000482158 ERGIC2Q96RQ1 377 aa4.75□□□□□ -1.65
SF3B1-210ENST00000482158 MCRIP2Q9BUT9 160 aaKnown RBP4.75□□□□□ -1.65
SF3B1-210ENST00000482158 NUSAP1Q9BXS6 441 aaKnown RBP4.75□□□□□ -1.65
SF3B1-210ENST00000482158 LRRC2Q9BYS8 371 aa4.75□□□□□ -1.65
SF3B1-210ENST00000482158 NAPBQ9H115 298 aa4.75□□□□□ -1.65
SF3B1-210ENST00000482158 UPF3AQ9H1J1 476 aaKnown RBP4.75□□□□□ -1.65
SF3B1-210ENST00000482158 PARLQ9H300 379 aa4.75□□□□□ -1.65
SF3B1-210ENST00000482158 VIPAS39Q9H9C1 493 aa4.75□□□□□ -1.65
SF3B1-210ENST00000482158 IL1RAPQ9NPH3 570 aa4.75□□□□□ -1.65
SF3B1-210ENST00000482158 TEX10Q9NXF1 929 aaPredicted RBP4.75□□□□□ -1.65
SF3B1-210ENST00000482158 NDE1Q9NXR1 346 aa4.75□□□□□ -1.65
SF3B1-210ENST00000482158 KLK11Q9UBX7 282 aa4.75□□□□□ -1.65
SF3B1-210ENST00000482158 BAIAP2L1Q9UHR4 511 aa4.75□□□□□ -1.65
SF3B1-210ENST00000482158 MAD2L2Q9UI95 211 aa4.75□□□□□ -1.65
SF3B1-210ENST00000482158 SNX5Q9Y5X3 404 aa4.75□□□□□ -1.65
SF3B1-210ENST00000482158 TDRD15B5MCY1 1934 aaKnown RBP4.75□□□□□ -1.65
SF3B1-210ENST00000482158 SNED1Q8TER0 1413 aa4.74□□□□□ -1.65
SF3B1-210ENST00000482158 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.74□□□□□ -1.65
SF3B1-210ENST00000482158 KRTAP16-1A8MUX0 517 aa4.74□□□□□ -1.65
SF3B1-210ENST00000482158 KPNA7A9QM74 516 aa4.74□□□□□ -1.65
SF3B1-210ENST00000482158 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.74□□□□□ -1.65
SF3B1-210ENST00000482158 EPM2AB3EWF7 344 aa4.74□□□□□ -1.65
SF3B1-210ENST00000482158 H7C423 109 aa4.74□□□□□ -1.65
SF3B1-210ENST00000482158 VEGFDO43915 354 aa4.74□□□□□ -1.65
SF3B1-210ENST00000482158 FGF19O95750 216 aa4.74□□□□□ -1.65
SF3B1-210ENST00000482158 CALCAP01258 141 aa4.74□□□□□ -1.65
SF3B1-210ENST00000482158 B4GALT1P15291 398 aa4.74□□□□□ -1.65
SF3B1-210ENST00000482158 ERVK11-1P61568 191 aa4.74□□□□□ -1.65
SF3B1-210ENST00000482158 MFGE8Q08431 387 aaPredicted RBP4.74□□□□□ -1.65
SF3B1-210ENST00000482158 ZNF177Q13360 481 aaPredicted RBP4.74□□□□□ -1.65
SF3B1-210ENST00000482158 MSLNQ13421 630 aaPredicted RBP4.74□□□□□ -1.65
SF3B1-210ENST00000482158 PDE7AQ13946 482 aa4.74□□□□□ -1.65
SF3B1-210ENST00000482158 FASTKD3Q14CZ7 662 aaKnown RBP4.74□□□□□ -1.65
SF3B1-210ENST00000482158 SPHARQ15513 63 aa4.74□□□□□ -1.65
SF3B1-210ENST00000482158 LYPLAL1Q5VWZ2 237 aa4.74□□□□□ -1.65
SF3B1-210ENST00000482158 LCLAT1Q6UWP7 414 aa4.74□□□□□ -1.65
SF3B1-210ENST00000482158 CACUL1Q86Y37 369 aa4.74□□□□□ -1.65
SF3B1-210ENST00000482158 Q8NBF4 154 aa4.74□□□□□ -1.65
SF3B1-210ENST00000482158 C8orf46Q8TAG6 207 aa4.74□□□□□ -1.65
SF3B1-210ENST00000482158 HAS2Q92819 552 aa4.74□□□□□ -1.65
SF3B1-210ENST00000482158 C11orf52Q96A22 123 aa4.74□□□□□ -1.65
SF3B1-210ENST00000482158 ULK4Q96C45 1275 aa4.74□□□□□ -1.65
SF3B1-210ENST00000482158 C18orf12Q96KH6 178 aa4.74□□□□□ -1.65
SF3B1-210ENST00000482158 CCDC43Q96MW1 224 aaKnown RBP4.74□□□□□ -1.65
SF3B1-210ENST00000482158 GUCD1Q96NT3 240 aa4.74□□□□□ -1.65
SF3B1-210ENST00000482158 AGAP4Q96P64 663 aa4.74□□□□□ -1.65
SF3B1-210ENST00000482158 ATP6V0BQ99437 205 aa4.74□□□□□ -1.65
SF3B1-210ENST00000482158 SSX3Q99909 188 aa4.74□□□□□ -1.65
SF3B1-210ENST00000482158 UBAC1Q9BSL1 405 aa4.74□□□□□ -1.65
SF3B1-210ENST00000482158 FAM212BQ9NTI7 297 aaPredicted RBP4.74□□□□□ -1.65
SF3B1-210ENST00000482158 CYP39A1Q9NYL5 469 aa4.74□□□□□ -1.65
SF3B1-210ENST00000482158 NLGN3Q9NZ94 848 aa4.74□□□□□ -1.65
SF3B1-210ENST00000482158 TEX264Q9Y6I9 313 aa4.74□□□□□ -1.65
SF3B1-210ENST00000482158 NDUFAF8A1L188 74 aa4.73□□□□□ -1.65
SF3B1-210ENST00000482158 TRIM64A6NGJ6 449 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms