RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 PCYT1AP49585 367 aa10.84□□□□□ -0.67
USP11-208ENST00000480104 GPR143P51810 404 aa10.84□□□□□ -0.67
USP11-208ENST00000480104 HK2P52789 917 aa10.84□□□□□ -0.67
USP11-208ENST00000480104 TAS2R40P59535 323 aa10.84□□□□□ -0.67
USP11-208ENST00000480104 RCAN2Q14206 197 aa10.84□□□□□ -0.67
USP11-208ENST00000480104 TERF2Q15554 542 aa10.84□□□□□ -0.67
USP11-208ENST00000480104 HECTD2Q5U5R9 776 aa10.84□□□□□ -0.67
USP11-208ENST00000480104 PRAMEF20Q5VT98 475 aa10.84□□□□□ -0.67
USP11-208ENST00000480104 RANBP10Q6VN20 620 aa10.84□□□□□ -0.67
USP11-208ENST00000480104 MILR1Q7Z6M3 343 aa10.84□□□□□ -0.67
USP11-208ENST00000480104 OR10H5Q8NGA6 315 aa10.84□□□□□ -0.67
USP11-208ENST00000480104 ZFAND2BQ8WV99 257 aa10.84□□□□□ -0.67
USP11-208ENST00000480104 WDYHV1Q96HA8 205 aa10.84□□□□□ -0.67
USP11-208ENST00000480104 GORASP1Q9BQQ3 440 aa10.84□□□□□ -0.67
USP11-208ENST00000480104 TMEM204Q9BSN7 226 aa10.84□□□□□ -0.67
USP11-208ENST00000480104 BARX1Q9HBU1 254 aaPredicted RBP10.84□□□□□ -0.67
USP11-208ENST00000480104 RSPH14Q9UHP6 348 aa10.84□□□□□ -0.67
USP11-208ENST00000480104 SLC6A5Q9Y345 797 aa10.84□□□□□ -0.67
USP11-208ENST00000480104 YLPM1P49750 1951 aaKnown RBP10.83□□□□□ -0.68
USP11-208ENST00000480104 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.83□□□□□ -0.68
USP11-208ENST00000480104 TMEM89A2RUT3 159 aa10.83□□□□□ -0.68
USP11-208ENST00000480104 OR51F1A6NGY5 319 aa10.83□□□□□ -0.68
USP11-208ENST00000480104 TGFBR3LH3BV60 316 aa10.83□□□□□ -0.68
USP11-208ENST00000480104 TNFSF13O75888 250 aa10.83□□□□□ -0.68
USP11-208ENST00000480104 RCBTB2O95199 551 aa10.83□□□□□ -0.68
USP11-208ENST00000480104 THBDP07204 575 aa10.83□□□□□ -0.68
USP11-208ENST00000480104 CCDC172P0C7W6 258 aa10.83□□□□□ -0.68
USP11-208ENST00000480104 GZMAP12544 262 aa10.83□□□□□ -0.68
USP11-208ENST00000480104 KDELR1P24390 212 aa10.83□□□□□ -0.68
USP11-208ENST00000480104 PPP2R1BP30154 601 aa10.83□□□□□ -0.68
USP11-208ENST00000480104 ADRA1AP35348 466 aa10.83□□□□□ -0.68
USP11-208ENST00000480104 DYNLT1P63172 113 aa10.83□□□□□ -0.68
USP11-208ENST00000480104 FAPQ12884 760 aa10.83□□□□□ -0.68
USP11-208ENST00000480104 MEI1Q5TIA1 1274 aa10.83□□□□□ -0.68
USP11-208ENST00000480104 ANKRD34AQ69YU3 496 aa10.83□□□□□ -0.68
USP11-208ENST00000480104 PID1Q7Z2X4 250 aa10.83□□□□□ -0.68
USP11-208ENST00000480104 SEMA6DQ8NFY4 1073 aa10.83□□□□□ -0.68
USP11-208ENST00000480104 PDLIM2Q96JY6 352 aa10.83□□□□□ -0.68
USP11-208ENST00000480104 JSRP1Q96MG2 331 aaPredicted RBP10.83□□□□□ -0.68
USP11-208ENST00000480104 TM9SF2Q99805 663 aa10.83□□□□□ -0.68
USP11-208ENST00000480104 UGT2B28Q9BY64 529 aa10.83□□□□□ -0.68
USP11-208ENST00000480104 PRDM9Q9NQV7 894 aa10.83□□□□□ -0.68
USP11-208ENST00000480104 PNO1Q9NRX1 252 aaKnown RBP10.83□□□□□ -0.68
USP11-208ENST00000480104 ABCF3Q9NUQ8 709 aa10.83□□□□□ -0.68
USP11-208ENST00000480104 NLE1Q9NVX2 485 aaPredicted RBP10.83□□□□□ -0.68
USP11-208ENST00000480104 INTUQ9ULD6 942 aa10.83□□□□□ -0.68
USP11-208ENST00000480104 R3HDM2Q9Y2K5 976 aaKnown RBP10.83□□□□□ -0.68
USP11-208ENST00000480104 ATP6V1DQ9Y5K8 247 aa10.83□□□□□ -0.68
USP11-208ENST00000480104 LOC100289279A0A1B0GTE1 492 aa10.82□□□□□ -0.68
USP11-208ENST00000480104 A0A1W2PNV4 684 aa10.82□□□□□ -0.68
USP11-208ENST00000480104 FAM157AC9JC47 383 aa10.82□□□□□ -0.68
USP11-208ENST00000480104 C16orf97H3BN30 126 aa10.82□□□□□ -0.68
USP11-208ENST00000480104 H7BY64 318 aa10.82□□□□□ -0.68
USP11-208ENST00000480104 B3GALT4O96024 378 aa10.82□□□□□ -0.68
USP11-208ENST00000480104 DANCRP0C864 163 aa10.82□□□□□ -0.68
USP11-208ENST00000480104 POU2F1P14859 743 aa10.82□□□□□ -0.68
USP11-208ENST00000480104 EEF1GP26641 437 aaKnown RBP10.82□□□□□ -0.68
USP11-208ENST00000480104 AOAHP28039 575 aa10.82□□□□□ -0.68
USP11-208ENST00000480104 GEMP55040 296 aa10.82□□□□□ -0.68
USP11-208ENST00000480104 TMED2Q15363 201 aa10.82□□□□□ -0.68
USP11-208ENST00000480104 ERICH6BQ5W0A0 696 aa10.82□□□□□ -0.68
USP11-208ENST00000480104 ZNF474Q6S9Z5 364 aaPredicted RBP10.82□□□□□ -0.68
USP11-208ENST00000480104 ZNF571Q7Z3V5 609 aaPredicted RBP10.82□□□□□ -0.68
USP11-208ENST00000480104 KRT222Q8N1A0 295 aa10.82□□□□□ -0.68
USP11-208ENST00000480104 CAMKVQ8NCB2 501 aa10.82□□□□□ -0.68
USP11-208ENST00000480104 GSDMBQ8TAX9 411 aa10.82□□□□□ -0.68
USP11-208ENST00000480104 TFB1MQ8WVM0 346 aaKnown RBP10.82□□□□□ -0.68
USP11-208ENST00000480104 PLPPR2Q96GM1 343 aa10.82□□□□□ -0.68
USP11-208ENST00000480104 CDKN2AIPNLQ96HQ2 116 aa10.82□□□□□ -0.68
USP11-208ENST00000480104 PRAP1Q96NZ9 151 aa10.82□□□□□ -0.68
USP11-208ENST00000480104 EBNA1BP2Q99848 306 aaKnown RBP10.82□□□□□ -0.68
USP11-208ENST00000480104 TUBA1CQ9BQE3 449 aa10.82□□□□□ -0.68
USP11-208ENST00000480104 ZFATQ9P243 1243 aa10.82□□□□□ -0.68
USP11-208ENST00000480104 SAE1Q9UBE0 346 aaPredicted RBP10.82□□□□□ -0.68
USP11-208ENST00000480104 TSR3Q9UJK0 312 aaKnown RBP10.82□□□□□ -0.68
USP11-208ENST00000480104 MRFAP1Q9Y605 127 aa10.82□□□□□ -0.68
USP11-208ENST00000480104 SLC22A7Q9Y694 548 aa10.82□□□□□ -0.68
USP11-208ENST00000480104 EPN1Q9Y6I3 576 aaPredicted RBP10.82□□□□□ -0.68
USP11-208ENST00000480104 FREM3P0C091 2139 aa10.81□□□□□ -0.68
USP11-208ENST00000480104 TENM3Q9P273 2699 aa10.81□□□□□ -0.68
USP11-208ENST00000480104 F8W8V4 182 aa10.81□□□□□ -0.68
USP11-208ENST00000480104 MYO1FO00160 1098 aa10.81□□□□□ -0.68
USP11-208ENST00000480104 GALR3O60755 368 aaPredicted RBP10.81□□□□□ -0.68
USP11-208ENST00000480104 LRATO95237 230 aa10.81□□□□□ -0.68
USP11-208ENST00000480104 CYP4B1P13584 511 aa10.81□□□□□ -0.68
USP11-208ENST00000480104 FOXN2P32314 431 aa10.81□□□□□ -0.68
USP11-208ENST00000480104 EIF3BP55884 814 aaKnown RBP10.81□□□□□ -0.68
USP11-208ENST00000480104 RPS15AP62244 130 aaKnown RBP10.81□□□□□ -0.68
USP11-208ENST00000480104 ABATP80404 500 aa10.81□□□□□ -0.68
USP11-208ENST00000480104 HERC3Q15034 1050 aa10.81□□□□□ -0.68
USP11-208ENST00000480104 DEFB134Q4QY38 66 aa10.81□□□□□ -0.68
USP11-208ENST00000480104 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.81□□□□□ -0.68
USP11-208ENST00000480104 DENND5AQ6IQ26 1287 aa10.81□□□□□ -0.68
USP11-208ENST00000480104 OPN5Q6U736 354 aa10.81□□□□□ -0.68
USP11-208ENST00000480104 CLEC2AQ6UVW9 174 aa10.81□□□□□ -0.68
USP11-208ENST00000480104 AFAP1L2Q8N4X5 818 aa10.81□□□□□ -0.68
USP11-208ENST00000480104 MLKLQ8NB16 471 aa10.81□□□□□ -0.68
USP11-208ENST00000480104 PPFIBP2Q8ND30 876 aa10.81□□□□□ -0.68
USP11-208ENST00000480104 OR9A1PQ8NGU1 263 aa10.81□□□□□ -0.68
USP11-208ENST00000480104 ZPLD1Q8TCW7 415 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms